CK938632

Overview
NameCK938632
Unique NameCK938632
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.288e-63
Identity = 113/163 (69.33%), Postives = 132/163 (80.98%), Query Frame = 3
Query:   90 SMLHLFLVLGSLMAASAGNFYKDFDITWGDGRAKMLN-NGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            + L +FL     M   AG+F+KD  I WGDGR K+ + +G LL+LSL K+SGSGFQS  E+LYGK ++Q+KLVPGNSAGTVT +YLKSPG+TWDEIDFEFLGN SG PYTLHTNV+T G GD+EQQFH WFDPT +FHTY I WNPQRIIF+VDG PIREFKN
Sbjct:   10 AFLIMFLFAAQSMHVYAGSFHKDVQIHWGDGRGKVRDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKN 172          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.197e-63
Identity = 113/163 (69.33%), Postives = 133/163 (81.60%), Query Frame = 3
Query:   90 SMLHLFLVLGSLMAASAGNFYKDFDITWGDGRAKMLN-NGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            + L LFL+    +   AG+F+KD  I WGDGR K+ + +G LL+LSL K+SGSGFQS  E+LYGK ++Q+KLVPGNSAGTVT +YLKSPG+TWDEIDFEFLGN SG PYTLHTNV+T G GD+EQQFH WFDPT +FHTY I WNPQRIIF+VDG PIREFKN
Sbjct:   10 AFLLLFLLAAQSVHVYAGSFHKDVQIHWGDGRGKIHDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKN 172          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.424e-62
Identity = 108/151 (71.52%), Postives = 123/151 (81.46%), Query Frame = 3
Query:  123 LMAASAGNFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            L+  + G+FY  FDITWG GRA +  +G LLT +L K SGSGFQSK EYL+GKIDM++KLVPGNSAGTVTAYYL S G TWDEIDFEFLGN +G PY +HTNVFT GKG+RE QF+ WFDPTADFHTY++LWNP  IIF VDG PIR FKN
Sbjct:   19 LIGVATGSFYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKN 169          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 1.925e-59
Identity = 106/165 (64.24%), Postives = 129/165 (78.18%), Query Frame = 3
Query:   81 SMASMLHLFLVLGSLMAASAGNFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            S+ +++   L++    +A A NF+ +FD+TWGD R K+ N G++L+LSL + SGSGF+SK EYL+G+IDMQLKLV GNSAGTVTAYYL S G+T DEIDFEFLGN +G PY LHTNVF  GKGDREQQF+ WFDPT +FHTYSI+W PQ IIF VD  PIR F N
Sbjct:    6 SLTTIVATVLLVTLFGSAYASNFFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGATHDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNN 170          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 6.845e-57
Identity = 102/162 (62.96%), Postives = 125/162 (77.16%), Query Frame = 3
Query:   90 SMLHLFLVLGSLMAASAGNFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            ++L   LV+     A +G+F ++FD+TWG+ R K+ + G +L+LSL + SGSGF+SK EYL+G+IDMQLKLV GNSAGTVTAYYL S G T DEIDFEFLGN +G PY LHTNVF  GKG+REQQF+ WFDPT +FHTYS++W PQ IIF VD  PIR F N
Sbjct:    8 TVLMTLLVVTMAGTAFSGSFNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPTHDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNN 169          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.211e-45
Identity = 84/144 (58.33%), Postives = 108/144 (75.00%), Query Frame = 3
Query:  144 NFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            +F K+F +TWG  +  M  NG  L L L K++GS  +SK  +L+G ++M +KLVPGNSAGTV AYYL S GST DEIDFEFLGN++G PYT+HTN++  GKG+REQQF  WF+PT  FH Y+I WNP  +++ VDGTPIR F+N
Sbjct:   28 DFSKNFIVTWG--KDHMFMNGTNLRLVLDKSAGSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSSTGSTHDEIDFEFLGNATGQPYTIHTNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRN 169          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.339e-44
Identity = 93/173 (53.76%), Postives = 113/173 (65.32%), Query Frame = 3
Query:   84 MASMLHLFLVLGSLMAAS-AGN--------FYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            M S L   L+L SL +AS A N        F +++  TW     K LN G  + L L K +G+GFQSK  YL+G   M +KLVPG+SAGTVTA+YL S  +  DEIDFEFLGN +G PY L TNVFT GKGDREQ+ + WFDPT  +H YS+LWN  +I+F VD  PIR FKN
Sbjct:    1 MGSSLWTCLILLSLASASFAANPRTPIDVPFGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKN 173          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 1.934e-43
Identity = 83/161 (51.55%), Postives = 108/161 (67.08%), Query Frame = 3
Query:   96 LHLFLVLGSLMAASAGNFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSP-GSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            L LF  L   + +    F  DF I W D     ++ G  + L L  +SG GF SK +YL+G++ M++KL+PG+SAGTVTA+Y+ S   S  DE+DFEFLGN SG PYT+ TNVF +GKGDREQ+ + WFDP+ DFH Y+I WN  RI+F VD  PIR +KN
Sbjct:   17 LCLFAALYQPVMSRPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKN 177          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 3.298e-43
Identity = 75/151 (49.67%), Postives = 111/151 (73.51%), Query Frame = 3
Query:  126 MAASAGNFYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTW-DEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            ++A    F +DF   W +   + + +G  + L L +++G GF SK +YL+G++ M++KL+PG+SAGTVTA+Y+ S  +T  DE+DFEFLGN SG PY++ TN+F +GKGDREQ+ + WFDP+ D+HTY+ILW+ + I+F VD  PIRE+KN
Sbjct:   28 VSARPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKN 178          
BLAST of CK938632 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 5.626e-43
Identity = 81/143 (56.64%), Postives = 100/143 (69.93%), Query Frame = 3
Query:  147 FYKDFDITWGDGRAKMLNNGDLLTLSLHKASGSGFQSKNEYLYGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNSSGDPYTLHTNVFTNGKGDREQQFHXWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKN 575
            F +++  TW     K  N G  + L L K +G+GFQSK  YL+G   M +K+VPG+SAGTVTA+YL S  +  DEIDFEFLGN +G PY L TNVFT GKGDREQ+ + WFDPT ++H YSILWN  +I+F VD  PIR FKN
Sbjct:   33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKN 175          
The following BLAST results are available for this feature:
BLAST of CK938632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
XTH18_ARATH1.288e-6369.33Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH2.197e-6369.33Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH1.424e-6271.52Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH1.925e-5964.24Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH6.845e-5762.96Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH26_ARATH1.211e-4558.33Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN1.339e-4453.76Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH7_ARATH1.934e-4351.55Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH6_ARATH3.298e-4349.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN5.626e-4356.64Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004440_C11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IF_C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938632 ID=CK938632; Name=CK938632; organism=Citrus sinensis; type=EST; length=576bp
GGGGATCGCTCCAGTTTCGAATTATCAACTTCTCTCTGTTCATTCAAACA
CTACTTGTACCTCGTTTGCTCAAGCATATGTCTATGGCTTCAATGTTGCA
TTTGTTTCTTGTGCTTGGCTCTTTGATGGCTGCCTCTGCTGGTAACTTCT
ACAAAGATTTTGACATCACCTGGGGAGATGGCCGTGCCAAGATGCTCAAC
AATGGCGACCTTCTTACTCTTTCCCTCCATAAAGCTTCTGGCTCAGGATT
CCAGTCCAAGAATGAGTATCTATATGGCAAGATTGACATGCAGCTCAAGC
TTGTCCCTGGCAACTCTGCTGGCACAGTCACTGCTTATTACCTAAAATCA
CCGGGATCAACATGGGATGAGATAGACTTTGAATTCCTGGGAAATTCAAG
TGGTGACCCTTACACTCTTCATACCAATGTATTTACAAATGGCAAAGGTG
ACAGAGAGCAACAATTTCACNNNTGGTTTGACCCCACTGCTGACTTTCAC
ACCTATTCTATCCTCTGGAATCCTCAGCGCATTATCTTCTCTGTTGATGG
CACCCCAATAAGAGAATTTAAGAACT
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