CK938605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB6_BOVIN (Tubulin beta-6 chain OS=Bos taurus GN=TUBB6 PE=2 SV=1) HSP 1 Score: 452.981 bits (1164), Expect = 9.626e-127 Identity = 218/277 (78.70%), Postives = 244/277 (88.09%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +D+VLDVVRKE E+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT+RGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG MS KEVDEQM+ +QNKNSSYFVEWIPNNVK +VCDIPPRGL M++TFIGNST+IQE+F+R+SEQF+AMF Sbjct: 113 VDSVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFSAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB3_DROME (Tubulin beta-3 chain OS=Drosophila melanogaster GN=betaTub60D PE=1 SV=2) HSP 1 Score: 452.981 bits (1164), Expect = 9.626e-127 Identity = 216/277 (77.98%), Postives = 244/277 (88.09%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +D VLDVVRKE ENCDCLQGFQ+ H ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLK++ PS+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+ VQNKNSSYFVEWIPNNVK++VCDIPP+GL M+STFIGN+T+IQE+F+R+SEQF+AMF Sbjct: 119 VDNVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMF 395
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB3_RAT (Tubulin beta-3 chain OS=Rattus norvegicus GN=Tubb3 PE=1 SV=1) HSP 1 Score: 452.21 bits (1162), Expect = 1.642e-126 Identity = 216/277 (77.98%), Postives = 243/277 (87.73%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +D+VLDVVRKE ENCDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLKL TP++GDLNHL+SATMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT+RGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT + +FRG+MS KEVDEQM+ +Q+KNSSYFVEWIPNNVK +VCDIPPRGL M+STFIGNST+IQE+F+R+SEQFTAMF Sbjct: 113 VDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB3_MOUSE (Tubulin beta-3 chain OS=Mus musculus GN=Tubb3 PE=1 SV=1) HSP 1 Score: 452.21 bits (1162), Expect = 1.642e-126 Identity = 216/277 (77.98%), Postives = 243/277 (87.73%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +D+VLDVVRKE ENCDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLKL TP++GDLNHL+SATMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT+RGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT + +FRG+MS KEVDEQM+ +Q+KNSSYFVEWIPNNVK +VCDIPPRGL M+STFIGNST+IQE+F+R+SEQFTAMF Sbjct: 113 VDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB3_MACFA (Tubulin beta-3 chain OS=Macaca fascicularis GN=TUBB3 PE=2 SV=1) HSP 1 Score: 452.21 bits (1162), Expect = 1.642e-126 Identity = 216/277 (77.98%), Postives = 243/277 (87.73%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +D+VLDVVRKE ENCDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLKL TP++GDLNHL+SATMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT+RGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT + +FRG+MS KEVDEQM+ +Q+KNSSYFVEWIPNNVK +VCDIPPRGL M+STFIGNST+IQE+F+R+SEQFTAMF Sbjct: 113 VDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB3_HUMAN (Tubulin beta-3 chain OS=Homo sapiens GN=TUBB3 PE=1 SV=2) HSP 1 Score: 452.21 bits (1162), Expect = 1.642e-126 Identity = 216/277 (77.98%), Postives = 243/277 (87.73%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +D+VLDVVRKE ENCDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLKL TP++GDLNHL+SATMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT+RGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT + +FRG+MS KEVDEQM+ +Q+KNSSYFVEWIPNNVK +VCDIPPRGL M+STFIGNST+IQE+F+R+SEQFTAMF Sbjct: 113 VDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB3_BOVIN (Tubulin beta-3 chain OS=Bos taurus GN=TUBB3 PE=2 SV=1) HSP 1 Score: 452.21 bits (1162), Expect = 1.642e-126 Identity = 216/277 (77.98%), Postives = 243/277 (87.73%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +D+VLDVVRKE ENCDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLKL TP++GDLNHL+SATMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT+RGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT + +FRG+MS KEVDEQM+ +Q+KNSSYFVEWIPNNVK +VCDIPPRGL M+STFIGNST+IQE+F+R+SEQFTAMF Sbjct: 113 VDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB_LEIME (Tubulin beta chain OS=Leishmania mexicana PE=3 SV=1) HSP 1 Score: 451.825 bits (1161), Expect = 2.144e-126 Identity = 218/279 (78.14%), Postives = 247/279 (88.53%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLR-KLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR-ALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 ID+VLDV RKEAE+CDCLQGFQ+ H ISK+REEYPDR+M+TFSV PSP+VSDTVVEPYN TLSVHQLVEN+DE M +DNEALYDICFRTLKLTTP+FGDLNHL++A MSGVTCCLRFPGQLNSDLR +LAVNL+PFPRLHFFM+GFAPLTSRGSQ+YR L+V ++TQQM+DAKNMM AADPRHGRYLTASA+FRG+MS KEVDEQM+NVQNKNSSYF+EWIPNN+KSS+CDIPP+GL M+ TFIGN+T IQEMFRRV EQFT MF Sbjct: 113 IDSVLDVCRKEAESCDCLQGFQLSHSLGGGTGSGMGTLLISKLREEYPDRIMMTFSVIPSPRVSDTVVEPYNTTLSVHQLVENSDESMCIDNEALYDICFRTLKLTTPTFGDLNHLVAAVMSGVTCCLRFPGQLNSDLRNRLAVNLVPFPRLHFFMMGFAPLTSRGSQEYRQGLSVADVTQQMFDAKNMMQAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFIEWIPNNIKSSICDIPPKGLKMSVTFIGNNTCIQEMFRRVGEQFTGMF 391
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB1_ECHMU (Tubulin beta-1 chain OS=Echinococcus multilocularis GN=TUB-1 PE=3 SV=1) HSP 1 Score: 451.825 bits (1161), Expect = 2.144e-126 Identity = 213/277 (76.90%), Postives = 243/277 (87.73%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +++VLDV+RKE E+CDCLQGFQ+CH ISK+REE+PDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLKLT P++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYR LTV ELTQQM+DAKNMM A DPRHGRYLT +AMFRG+MS KEVD+QM+N QNKNSSYFVEWIPNNVK++VCDIPPRGL M+ TF+GN+T+IQE+F+RVSEQFT MF Sbjct: 113 VESVLDVIRKECESCDCLQGFQMCHSLGGGTGSGMGTLLISKMREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYDICFRTLKLTNPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRVLTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDDQMLNAQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSVTFMGNTTAIQEIFKRVSEQFTVMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB6_HUMAN (Tubulin beta-6 chain OS=Homo sapiens GN=TUBB6 PE=1 SV=1) HSP 1 Score: 451.44 bits (1160), Expect = 2.801e-126 Identity = 218/277 (78.70%), Postives = 243/277 (87.73%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +DAVLDVVRKE E+CDCLQGFQ+ H ISKIREE+PDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DA+NMM A DPRHGRYLT + +FRG MS KEVDEQM+ +Q+KNSSYFVEWIPNNVK +VCDIPPRGL MASTFIGNST+IQE+F+R+SEQF+AMF Sbjct: 113 VDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMF 389 The following BLAST results are available for this feature:
BLAST of CK938605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938605 ID=CK938605; Name=CK938605; organism=Citrus sinensis; type=EST; length=834bpback to top |