CK938605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBA3_RAT (Tubulin alpha-3 chain OS=Rattus norvegicus GN=Tuba3a PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.289e-50 Identity = 97/285 (34.04%), Postives = 158/285 (55.44%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +D VLD +RK A+ C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF + +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP + A + N+T+I E + R+ +F M+ Sbjct: 115 VDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBA3_MOUSE (Tubulin alpha-3 chain OS=Mus musculus GN=Tuba3a PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.289e-50 Identity = 97/285 (34.04%), Postives = 158/285 (55.44%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +D VLD +RK A+ C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF + +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP + A + N+T+I E + R+ +F M+ Sbjct: 115 VDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBA3C_HUMAN (Tubulin alpha-3C/D chain OS=Homo sapiens GN=TUBA3C PE=1 SV=3) HSP 1 Score: 197.593 bits (501), Expect = 7.289e-50 Identity = 97/285 (34.04%), Postives = 158/285 (55.44%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +D VLD +RK A+ C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF + +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP + A + N+T+I E + R+ +F M+ Sbjct: 115 VDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3) HSP 1 Score: 197.593 bits (501), Expect = 7.289e-50 Identity = 98/287 (34.15%), Postives = 157/287 (54.70%), Query Frame = 1 Query: 13 VLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAS-------------TFIGNSTSIQEMFRRVSEQFTAMF 834 VLD +RK +NC LQGF V H + ++ ++Y + L FSV+P+P+V+ VVEPYNA L+ H +E++D ++DNEA+YDIC R L + PS+ LN LI+ +S +T LRF G LN DL + NL+PFPR+H+ ++ +AP+ S + + ELT Q ++ N M DPR+G+Y+ + ++RG + ++ + ++ K+S VEW P K + P + AS + + N+T+I E + R+ +F M+ Sbjct: 119 VLDRIRKITDNCHSLQGFLVFHSFGGGTGSGFGALVLERLAQDYAKKCKLEFSVYPAPRVATAVVEPYNAVLATHSTLEHSDVTFLVDNEAVYDICRRNLDIPRPSYEHLNRLIAQVVSSITSSLRFDGALNVDLNEFQTNLVPFPRVHYPLISYAPVISATKSAHESFKTSELTLQCFEPNNQMVVCDPRNGKYMAVALLYRGDVVPRDTSAAVAALKAKSSFNLVEWCPTGFKIGINHQKPMSVPTASPADGGLASVDRSVSMLSNTTAIAEAWSRLDHKFDLMY 405
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2) HSP 1 Score: 197.208 bits (500), Expect = 9.520e-50 Identity = 97/285 (34.04%), Postives = 158/285 (55.44%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +D VLD +RK A+ C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF + +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP + A + N+T+I E + R+ +F M+ Sbjct: 115 VDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMY 399
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBA2_CHICK (Tubulin alpha-2 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.243e-49 Identity = 97/285 (34.04%), Postives = 157/285 (55.09%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +D V D +RK A++C LQGF + H + ++ EY + L F+++P+P+ S VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LIS +S +T LRF G LN DL + NL+PFPR+HF +V +AP+ S + L+V E+T ++ N M DP+ G+Y+ ++RG + K+V+ + ++ S FV+W P K + PP + A + N+T+I E + R+ +F M+ Sbjct: 112 VDMVSDRIRKLADSCSGLQGFLIFHSFGGGTGSGFTSLLMERLSVEYGKKSKLEFAIYPAPQASSAVVEPYNSVLTTHTTLEHSDCVFMVDNEAIYDICHRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPFPRIHFPLVTYAPIISSDRAYHEQLSVAEITSSCFEPNNQMVKCDPQQGKYMACCMLYRGDVVPKDVNVAIAAIKTNRSLQFVDWCPTGFKVGINYQPPIPTPGGDLAQVQRAVCMLSNTTAIAEAWARLDHKFDLMY 396
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.121e-49 Identity = 98/285 (34.39%), Postives = 157/285 (55.09%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 ID VLD VR+ A+NC LQGF V H + ++ +Y + L F V+P+P+ + +VVEPY+ L+ + +E AD ++DNEA+YDIC R L L P++ +LN LI+ +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + A +V E+T ++ N M DPRHG+Y+ ++ G + + + +++ K + FV+W P K +C PP ++ A + N+T+I E + +S +F M+ Sbjct: 115 IDQVLDKVRRVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYHNFLTTNTTLEQADCSFMVDNEAIYDICRRNLGLERPNYENLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVAYAPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYGGDVVPNDAHAAVASLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSALSSKFDLMY 399
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBA3_BOVIN (Tubulin alpha-3 chain OS=Bos taurus GN=TUBA3 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.618e-49 Identity = 96/285 (33.68%), Postives = 157/285 (55.09%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 +D VLD +RK A+ C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF + +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP + A + N+T+I E + R+ + M+ Sbjct: 115 VDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKLDLMY 399
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.171e-49 Identity = 93/285 (32.63%), Postives = 157/285 (55.09%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 ID V+D VR+ +NC+ LQGF V H + ++ +Y + L FSV+P+P ++ +VVEPYN+ L+ H +E++D ++DNEA+YDIC + L + P +LN LI+ +S +T LRF G LN DL + NL+PFPR+HF + AP+ S + + +V E+T ++ N M DPR G+Y+ + ++RG + K+ + + ++ K + FV+W P K +C+ PP + + + N+T+I + R+ +F ++ Sbjct: 114 IDVVMDKVRRLVDNCNGLQGFFVFHSFGGGTGSGFGALILERLSTDYGKKSKLEFSVYPAPTLASSVVEPYNSVLTTHTTLEHSDCSFMVDNEAIYDICKKNLNIAQPGLTNLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPFPRIHFPLATLAPIVSVDKAGHESNSVAEMTYSCFEPGNQMVKCDPRDGKYMACALLYRGDVVPKDTNAAVALIKTKRTIQFVDWCPTGFKLGICNEPPAHVPGGDLAKVKRSMCMLSNTTAISSAWSRLDHKFDLLY 398
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBA8_CAEEL (Tubulin alpha-8 chain OS=Caenorhabditis elegans GN=tba-8 PE=2 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 6.171e-49 Identity = 99/285 (34.74%), Postives = 159/285 (55.79%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSV---CDIPPRGLSMAST-----FIGNSTSIQEMFRRVSEQFTAMF 834 ID VLD +RK+ ENC+ LQGF V H + ++ E+ + L FSV+P+P+VS +VVEPYN+ L+ H +E +D ++DNEA+YD+C + L + PS+ +LN LI+ +S +T LRF G LN DL + NL+P+PR+HF + +AP+ S + L+V ++T ++ N M DP G+Y+ ++RG + K+V+ + +V+ K FV+W P K + I G +A + N+T+I E + R+ +F M+ Sbjct: 118 IDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMY 402 The following BLAST results are available for this feature:
BLAST of CK938605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938605 ID=CK938605; Name=CK938605; organism=Citrus sinensis; type=EST; length=834bpback to top |