CK938605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB1_PARTE (Tubulin beta chain OS=Paramecium tetraurelia GN=bPT2 PE=3 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 2.442e-138 Identity = 235/277 (84.84%), Postives = 255/277 (92.06%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 ID+VLDVVRKEAE CDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVENADECMV+DNEALYDICFRTLKLTTP++GDLNHL+SA MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQM+DAKNMMCAADPRHGRYLTASA+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNN+KSS+CDIPP+GL MA TF+GNST+IQEMF+RV+EQFTAMF Sbjct: 113 IDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB_TETPY (Tubulin beta chain OS=Tetrahymena pyriformis GN=BETA-TT1 PE=3 SV=1) HSP 1 Score: 489.574 bits (1259), Expect = 9.280e-138 Identity = 234/277 (84.48%), Postives = 255/277 (92.06%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 ID+VLDVVRKEAE CDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVENADECMV+DNEALYDICFRTLKLTTP++G+LNHL+SA MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQM+DAKNMMCAADPRHGRYLTASA+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNN+KSS+CDIPP+GL MA TF+GNST+IQEMF+RV+EQFTAMF Sbjct: 113 IDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGNLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB1_CYAPA (Tubulin beta-1 chain OS=Cyanophora paradoxa GN=TUBB1 PE=2 SV=1) HSP 1 Score: 487.649 bits (1254), Expect = 3.527e-137 Identity = 233/277 (84.12%), Postives = 255/277 (92.06%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 ID+VLDVVRKEAE CDCLQGFQ+ H I+K+REEYPDRMM T+SVFPSPKVSDTVVEPYNATLSVHQLVENADE MV+DNEALYDICFRTLKLTTP++GDLNHL+SA +SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM+GF PLTSRGSQQYRALTVPELTQQM+DAKNMMCAADPRHGRYLTASA+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNN+K+SVCDIPP+GL M++TFIGNST+IQEMF+RVSEQFTAMF Sbjct: 113 IDSVLDVVRKEAEGCDCLQGFQITHSMGGGTGSGMGTLLIAKVREEYPDRMMCTYSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFVPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB_EUPCR (Tubulin beta chain OS=Euplotes crassus PE=3 SV=1) HSP 1 Score: 487.263 bits (1253), Expect = 4.606e-137 Identity = 237/277 (85.56%), Postives = 255/277 (92.06%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 ID+VLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE MV+DNEALYDICFRTLKLTTP++GDLNHL+SA +SGVT CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM+DAKNMMCA+DPRHGRYLTASAMFRG+MS KEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPP+GL +ASTFIGNST+IQEMF+RV+EQFTAMF Sbjct: 113 IDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTSCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKLASTFIGNSTAIQEMFKRVAEQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB_TOXGO (Tubulin beta chain OS=Toxoplasma gondii PE=3 SV=1) HSP 1 Score: 483.797 bits (1244), Expect = 5.092e-136 Identity = 231/277 (83.39%), Postives = 254/277 (91.70%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 ID+VLDVVRKEAE CDCLQGFQ+ H ISK+REEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKLTTP++GDLNHL+SA MSGVTCCLRFPGQLNSDLRKLAVNL+PFPRLHFF++GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMMCA+DPRHGRYLTASAMFRG+MS KEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPP+GL M+ TF+GNST+IQEMF+RVS+QFTAMF Sbjct: 113 IDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLVPFPRLHFFLIGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMCASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNMKSSVCDIPPKGLKMSVTFVGNSTAIQEMFKRVSDQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB_EUPOC (Tubulin beta chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 483.026 bits (1242), Expect = 8.686e-136 Identity = 234/277 (84.48%), Postives = 254/277 (91.70%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 ID+VLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE MV+DNEALYDICFRTLKLTTP++GDLNHL+SA +SGVT CLRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A+DPRHGRYLTASAMFRG+MS KEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPP+GL M+STF+GNST+IQEMF+RV+EQFTAMF Sbjct: 113 IDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTACLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMSASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMSSTFVGNSTAIQEMFKRVAEQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB_STYLE (Tubulin beta chain OS=Stylonychia lemnae GN=TUBB1 PE=3 SV=1) HSP 1 Score: 481.485 bits (1238), Expect = 2.527e-135 Identity = 232/277 (83.75%), Postives = 251/277 (90.61%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 ID+VLDVVRKEAE CDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVENADE M +DNEALYDICFRTLKLTTP++GDLNHL+SA +SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DAKNMMCA+DPRHGRYLTASA+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPP+GL MA TF+GNST+IQEMF+RV EQFTAMF Sbjct: 113 IDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMATFSVVPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDICFRTLKLTTPTYGDLNHLVSAGISGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMTGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMAVTFLGNSTAIQEMFKRVGEQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB_PLAFK (Tubulin beta chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=2) HSP 1 Score: 481.485 bits (1238), Expect = 2.527e-135 Identity = 234/277 (84.48%), Postives = 251/277 (90.61%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 IDAVLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKLTTP++GDLNHL+SA MSGVTC LRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQM+DAKNMMCA+DPRHGRYLTA AMFRG+MS KEVDEQM+NVQNKNSSYFVEWIP+N KSSVCDIPP+GL MA TF+GNST+IQEMF+RVS+QFTAMF Sbjct: 113 IDAVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTACAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPHNTKSSVCDIPPKGLKMAVTFVGNSTAIQEMFKRVSDQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB_PLAF7 (Tubulin beta chain OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0084 PE=3 SV=1) HSP 1 Score: 481.485 bits (1238), Expect = 2.527e-135 Identity = 234/277 (84.48%), Postives = 251/277 (90.61%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 IDAVLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKLTTP++GDLNHL+SA MSGVTC LRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQM+DAKNMMCA+DPRHGRYLTA AMFRG+MS KEVDEQM+NVQNKNSSYFVEWIP+N KSSVCDIPP+GL MA TF+GNST+IQEMF+RVS+QFTAMF Sbjct: 113 IDAVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTACAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPHNTKSSVCDIPPKGLKMAVTFVGNSTAIQEMFKRVSDQFTAMF 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBB_EUPFO (Tubulin beta chain OS=Euplotes focardii PE=3 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 3.301e-135 Identity = 233/277 (84.12%), Postives = 253/277 (91.34%), Query Frame = 1 Query: 4 IDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMF 834 ID+VLDVVRKEAE CDCLQGFQ+ H ISKIRE+YPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE M +DNEALYDICFRTLK TTP++GDLNHL+SA +SGVT CLRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQM+DAKNMMCA+DPRHGRYLTASAMFRG+MS KEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPP+GL M+STFIGNST+IQEMF+RV+EQFTAMF Sbjct: 113 IDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREKYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDICFRTLKPTTPTYGDLNHLVSAVISGVTSCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMSSTFIGNSTAIQEMFKRVAEQFTAMF 389 The following BLAST results are available for this feature:
BLAST of CK938605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938605 ID=CK938605; Name=CK938605; organism=Citrus sinensis; type=EST; length=834bpback to top |