CK938603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_STAAS (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain MSSA476) GN=ndk PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.990e-34 Identity = 69/149 (46.31%), Postives = 94/149 (63.09%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 +E T++M+KPD VQR L+G+VISR E Q P +L+E HY + KPF+ LI +ITS PV M EG V +R +IGST+P +A PG+IRGDL + GRN++HGSDS ++ +REI LWF E E+ + + WL E Sbjct: 1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLDSAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_METBU (Nucleoside diphosphate kinase OS=Methanococcoides burtonii (strain DSM 6242) GN=ndk PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.599e-34 Identity = 71/149 (47.65%), Postives = 97/149 (65.10%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 +E TY+MVKPDGVQR LVG+++SR E + ++EHYK+ + +PFF L+ ++TSGP V M EG + R + G+T+P+ A PGTIRGDLAV GRNVVH SD+PE+ +REIGL F+E E+ + A +WL E Sbjct: 1 MERTYVMVKPDGVQRCLVGEIVSRIEKKGLKIAALRMNVMTEAAAKEHYKEHSERPFFGSLVSFVTSGPSVSMVIEGNNAIKIMRAINGATNPVDALPGTIRGDLAVDMGRNVVHASDAPESAEREIGLHFEESEISGYPRADDEWLYE 149
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_METB6 (Nucleoside diphosphate kinase OS=Methanoregula boonei (strain 6A8) GN=ndk PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.599e-34 Identity = 70/140 (50.00%), Postives = 89/140 (63.57%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWT 694 ++ T++M+KPDGVQRG VG ++SRFE P+ E Y++ SKPFFP L YI GP M WEG VVA RK+IG+T+P +A PGTIRGD + GRNV+H SDSPE+ REIG+ FK EL +T Sbjct: 1 MDRTFVMIKPDGVQRGQVGGIVSRFEAKGLKLVAARFEVLPESRVIEQYQEHLSKPFFPSLKSYIRGGPCFLMVWEGRNVVAIVRKMIGATNPQEAAPGTIRGDFGIDIGRNVIHASDSPESAAREIGIHFKPAELFAYT 140
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_EXISA (Nucleoside diphosphate kinase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=ndk PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.599e-34 Identity = 66/133 (49.62%), Postives = 93/133 (69.92%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKE 673 +E+T++MVKPDGV+RGL+G++ISRFE +++E HY + KPFF +L+E++TSGPVV M WEG +VA +R +IG T P+ A+PGTIRGD A +NV+HGSDS ++ +RE+ LWF E Sbjct: 1 MEKTFLMVKPDGVKRGLIGEIISRFENKGYTLNRLEMVTPSVEVAEAHYAEHKEKPFFGELVEFLTSGPVVAMEWEGEDIVAVSRLMIGKTKPVDAQPGTIRGDFASTMSQNVIHGSDSVDSAERELSLWFAE 133
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_THERP (Nucleoside diphosphate kinase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=ndk PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.789e-34 Identity = 71/147 (48.30%), Postives = 94/147 (63.95%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWL 715 +E T I+VKPD VQRGLVG+V+ R E + ++++E HY + KPF+ L+ +ITSGPVV EG + RK +G TDP QAEPGTIRGDLA+ G+NV+HGSDSPE EIGL+F+E EL + A +W+ Sbjct: 1 MERTLIIVKPDAVQRGLVGEVLRRLEQRGLRFVGLKLMKVDREVAERHYAEHRGKPFYEDLLAFITSGPVVVGVVEGPRAIEITRKTMGKTDPAQAEPGTIRGDLALTIGQNVIHGSDSPEKASYEIGLFFREDELVSYERAIDRWI 147
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_HALLT (Nucleoside diphosphate kinase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=ndk PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.789e-34 Identity = 68/150 (45.33%), Postives = 93/150 (62.00%), Query Frame = 2 Query: 278 EETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENG--KREIGLWFKEGELCQWTPAQAQWLRE 721 E T++MVKPDGVQRGL+G+++SRFE Q +DL+ +HY + KPFF L+++ITS PV M WEGA R ++G TDP ++ PGTIRGD + G+NV+H SD + G +REI L+F E EL + A W+ E Sbjct: 6 ERTFVMVKPDGVQRGLIGEIVSRFEERGLKLVGGKFMQIDEDLAHQHYGEHEGKPFFDGLVDFITSAPVFAMVWEGADATRQVRSMVGETDPAESAPGTIRGDFGLDLGQNVIHASDHEDEGANEREIDLFFDEEELVDYGLDTAAWVYE 155
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_METS3 (Nucleoside diphosphate kinase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=ndk PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.561e-34 Identity = 65/139 (46.76%), Postives = 97/139 (69.78%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQW 691 ++++++M+KPD VQR L+G ++SRFE Q +DL++ HY + KPFF LIEYITS P + M EG +++ RKL+G+T+PL+A+ GTIRGD A+ TGRN++H SDSP++ +REI L+F E E+C + Sbjct: 2 IQKSFVMMKPDAVQRRLMGKILSRFEEKGLQIVAVKLMQIDEDLAKTHYGEHADKPFFGSLIEYITSSPSLAMVIEGEEAISTIRKLVGATNPLEADLGTIRGDFAMDTGRNIIHASDSPDSAEREINLFFNEDEICDY 140
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_THET8 (Nucleoside diphosphate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ndk PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.290e-33 Identity = 68/136 (50.00%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682 +E T++M+KPDGV+RGLVG++++RFE Q ++L+E HY + KPFFP L+ +ITSGPVV M EG GVVA RK++G+T P A PGTIRGD A NV+HGS + E+ +REI L+F+ EL Sbjct: 1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHPKDALPGTIRGDFATTIDENVIHGSATLEDAQREIALFFRPEEL 136
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_THET2 (Nucleoside diphosphate kinase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=ndk PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.752e-33 Identity = 67/136 (49.26%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682 +E T++M+KPDGV+RGLVG++++RFE + ++L+E HY + KPFFP L+ +ITSGPVV M EG GVVA RK++G+T P A PGTIRGD A NV+HGS + E+ +REI L+F+ EL Sbjct: 1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMRISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHPKDALPGTIRGDFATTIDENVIHGSATLEDAQREIALFFRPEEL 136
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_MACCJ (Nucleoside diphosphate kinase OS=Macrococcus caseolyticus (strain JCSC5402) GN=ndk PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.752e-33 Identity = 63/147 (42.86%), Postives = 94/147 (63.95%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWL 715 +E+T++M+KPDGV RGL+G+++ R E +DL++ HY + + KPFF +L+E+ITSGPV M EG VV R L+G T+P ++ PGTIRGD + G+N++HGSDS + +EI LWFKE E+ + + W+ Sbjct: 1 MEKTFLMIKPDGVGRGLIGEIVKRIENKGIKVVGAKLMTVSEDLAKTHYGEHSEKPFFGELVEFITSGPVFAMVLEGDNVVEIGRTLVGKTNPAESAPGTIRGDFGMTVGKNIIHGSDSVASADKEIALWFKEEEILSYDLVTSAWV 147 The following BLAST results are available for this feature:
BLAST of CK938603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938603 ID=CK938603; Name=CK938603; organism=Citrus sinensis; type=EST; length=856bpback to top |