CK938603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_HAES1 (Nucleoside diphosphate kinase OS=Haemophilus somnus (strain 129Pt) GN=ndk PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.620e-21 Identity = 51/136 (37.50%), Postives = 79/136 (58.09%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682 +E+T ++KPD V+R L+G++ISR E ++ +E Y + + K FF +LI Y+TS P+V + + V R +G+T+P AE GT+R + A+ +N VHGSDS EN +REI +F E E+ Sbjct: 3 LEQTLAIIKPDAVERNLIGNIISRLEDKGFQIIAMKMLHLNQEQAEGFYTEHSDKAFFAELIRYMTSAPIVVLVLQKENAVKDYRTFMGTTNPEIAENGTLRYEFAINQTQNSVHGSDSLENAQREIAYFFAEAEI 138
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_FRAP2 (Nucleoside diphosphate kinase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=ndk PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.620e-21 Identity = 50/135 (37.04%), Postives = 75/135 (55.56%), Query Frame = 2 Query: 278 EETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682 + T ++KPD V++ ++G++ RFE K +E Y +PFF L+E++ SGPV+ EG +A RKL+G+T+P +AE GTIR D A N VHGSD+PE +EI +F + E+ Sbjct: 4 QRTLSIIKPDAVEKNIIGEIYRRFEKSGLKVVAAKMKHLSKAEAEGFYAVHKDRPFFSALVEFMISGPVMIQVLEGDNAIAKNRKLMGATNPKEAEAGTIRADFADSIDANAVHGSDAPETAAQEIKYFFSDIEI 138
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_CHRVO (Nucleoside diphosphate kinase OS=Chromobacterium violaceum GN=ndk PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.620e-21 Identity = 52/136 (38.24%), Postives = 73/136 (53.68%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682 +E T +VKPD V + ++G + RFE Q + +E Y +PFF L++++ SGPV+ A EG V R+L+G+TDP +AE GTIR D A N VHGSDS EN E+ +F E+ Sbjct: 3 IERTLSIVKPDAVAKNVIGKIYDRFESAGLKIVAAKMKQLSRAEAEGFYAVHKERPFFKDLVDFMVSGPVMIQALEGENAVLKNRELMGATDPKKAEAGTIRADFAESIDANAVHGSDSVENAAIEVAYFFAASEI 138
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_CELJU (Nucleoside diphosphate kinase OS=Cellvibrio japonicus (strain Ueda107) GN=ndk PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.620e-21 Identity = 50/136 (36.76%), Postives = 77/136 (56.62%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682 VE+T+ ++KPD V+ +G +++RFE Q +E Y + + F+ +L+ ++TSGPVV G +A R+L+G+TDP +A PGTIR D ++ N VHGSDSP + REI +F E+ Sbjct: 3 VEQTFSIIKPDAVKNNHIGAIVARFEKAGLKVIAQRMLQLTPAQAEGFYAEHKGRSFYDELVAFMTSGPVVVQVLYGENAIALNRELMGATDPTKAAPGTIRADFSMSMPANAVHGSDSPISAAREIAYFFPTHEV 138
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_BORPE (Nucleoside diphosphate kinase OS=Bordetella pertussis GN=ndk PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.620e-21 Identity = 49/133 (36.84%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKE 673 +E T ++KPD V + +VG +++RFE Q + +E Y +PFF L++++ SGPV EG + R L+G+TDP +A PGTIR D A N VHGSD+PE E+ +F E Sbjct: 3 IERTLSIIKPDAVAKNVVGQIVARFEQAGLKVIAARMQQLSRTDAERFYAVHKERPFFKDLVDFMVSGPVFVQVLEGESAIQKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_BORPA (Nucleoside diphosphate kinase OS=Bordetella parapertussis GN=ndk PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.620e-21 Identity = 49/133 (36.84%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKE 673 +E T ++KPD V + +VG +++RFE Q + +E Y +PFF L++++ SGPV EG + R L+G+TDP +A PGTIR D A N VHGSD+PE E+ +F E Sbjct: 3 IERTLSIIKPDAVAKNVVGQIVARFEQAGLKVIAARMQQLSRTDAERFYAVHKERPFFKDLVDFMVSGPVFVQVLEGESAIQKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_BORBR (Nucleoside diphosphate kinase OS=Bordetella bronchiseptica GN=ndk PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.620e-21 Identity = 49/133 (36.84%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKE 673 +E T ++KPD V + +VG +++RFE Q + +E Y +PFF L++++ SGPV EG + R L+G+TDP +A PGTIR D A N VHGSD+PE E+ +F E Sbjct: 3 IERTLSIIKPDAVAKNVVGQIVARFEQAGLKVIAARMQQLSRTDAERFYAVHKERPFFKDLVDFMVSGPVFVQVLEGESAIQKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_THICR (Nucleoside diphosphate kinase OS=Thiomicrospira crunogena (strain XCL-2) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.340e-21 Identity = 50/136 (36.76%), Postives = 79/136 (58.09%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682 +E T+ ++KPD V+R L+G ++S+ E ++ Y + + KPFF LI+ +T+GP+V EG +A R+++G TDP A G+IR + A+ +N VHGSDSPE+ +REI +F E E+ Sbjct: 2 LERTFSIIKPDAVKRNLIGQIVSKLEQNGLKVIASKMVFLTVQEAKGFYAEHDGKPFFDTLIKNMTAGPIVVQVLEGDDAIAKNREIMGPTDPENAPAGSIRKEYAISMQQNSVHGSDSPESAQREISYFFSEIEV 137
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_SHEHH (Nucleoside diphosphate kinase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.340e-21 Identity = 48/140 (34.29%), Postives = 77/140 (55.00%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWT 694 +E T+ ++KPD V + +G + +RFE ++ +E Y + + +PFF L+ ++TSGP++ EG V + R+++G+T+P +A GTIR D A N HGSDS + +REI +F ELC T Sbjct: 3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIIASKMVHLSQEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHREILGATNPAEAAEGTIRADFAESIDENAAHGSDSVASAEREIAYFFSTEELCPRT 142
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_SALTY (Nucleoside diphosphate kinase OS=Salmonella typhimurium GN=ndk PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 7.340e-21 Identity = 50/140 (35.71%), Postives = 76/140 (54.29%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWT 694 +E T+ ++KP+ V + ++G + +RFE + + Y + + KPFF L+E++TSGP+V E V R L+G+T+P A GT+R D A N HGSDS E+ +REI +F EGE+C T Sbjct: 3 IERTFSIIKPNAVAKNVIGSIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSLESAQREIAFFFGEGEVCPRT 142 The following BLAST results are available for this feature:
BLAST of CK938603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938603 ID=CK938603; Name=CK938603; organism=Citrus sinensis; type=EST; length=856bpback to top |