CK938603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_RALME (Nucleoside diphosphate kinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.340e-21 Identity = 48/131 (36.64%), Postives = 73/131 (55.73%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWF 667 +E T ++KPD V + ++G + +RFE + +E+ Y ++PFF L++++ SGPV+ A EG +A R L+G+TDP +AE GTIR D A N VHGSD+PE E+ +F Sbjct: 3 IERTLSIIKPDAVAKNVIGQIYARFEAAGLKVVAAKMVHLSRGEAEQFYAVHKARPFFKDLVDFMVSGPVMIQALEGESAIAKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETAAVEVAFFF 133
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_PSYIN (Nucleoside diphosphate kinase OS=Psychromonas ingrahamii (strain 37) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.340e-21 Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELC 685 +E T ++KPD V + L G +++RFE + + +E Y + + F+ LI+++TSGP+V + + R++IG TDP QA GTIR D A T N VHGSDSP + +EI +F + E+C Sbjct: 3 LERTLSIIKPDAVGKHLTGRILARFERAGLQPVAIKMVRLTSEQAEAFYAEHKGREFYQPLIDFMTSGPMVVQVLQAENAINLYREMIGKTDPTQAAAGTIRADFAESTRCNAVHGSDSPASAAKEIAFFFSDDEIC 139
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_PSEPF (Nucleoside diphosphate kinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.340e-21 Identity = 51/136 (37.50%), Postives = 77/136 (56.62%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682 V+ T+ ++KPD V + ++G + +RFE Q K +E Y + +++ FF +L+ ++TSGPVV EG +A R+L+G+T+P +A PGTIR D A N VHGSDS REI +F E+ Sbjct: 3 VQRTFSIIKPDAVAKNVIGKITTRFEDAGLRVVASKLKQLSKAEAEGFYAEHSARGFFGELVAFMTSGPVVVQVLEGENAIARNRELMGATNPKEAAPGTIRADFAESIDANAVHGSDSEAAAAREIAYFFAATEV 138
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_METEP (Nucleoside diphosphate kinase OS=Methylobacterium extorquens (strain PA1) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.340e-21 Identity = 50/135 (37.04%), Postives = 77/135 (57.04%), Query Frame = 2 Query: 278 EETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682 E T+ ++KPD +R + G V + E + ++ +E+ Y+ +PFF +L+E++TSGPVV EG VA R+++G+T+P QA GTIR A G N VHGSDS +N + EI +F E ++ Sbjct: 4 ERTFSILKPDATRRNITGAVNAVIEAAGLRIVGQRRIRMTREQAEKFYEVHKERPFFGELVEFMTSGPVVVQVLEGENAVAKYREVMGATNPAQAADGTIRKQFAESVGENTVHGSDSADNARLEIAQFFNEADI 138
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_ERWCT (Nucleoside diphosphate kinase OS=Erwinia carotovora subsp. atroseptica GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.340e-21 Identity = 49/137 (35.77%), Postives = 77/137 (56.20%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELC 685 +E T+ +VKP+ V + +G + +RFE + ++ +E Y + KPFF L+E++ SGP++ A EG V R ++G+T+P A GT+R D A N VHGSDS E+ +REI +F + E+C Sbjct: 3 IERTFSIVKPNAVAKNAIGAIYARFESAGFTIVASKMLRLSREQAEGFYAEHKGKPFFDGLVEFMMSGPIMVQALEGENAVQRNRDIMGATNPANALAGTLRADYADSFTANAVHGSDSIESAQREIAYFFSDDEIC 139
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_BART1 (Nucleoside diphosphate kinase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=ndk PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.340e-21 Identity = 52/136 (38.24%), Postives = 73/136 (53.68%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682 +E T+ M+KPD +R L G + E K +E+ Y +PFF +L+E+++SGP V EG +A R+++G+T+P AE GTIR A+ G N VHGSDS E K EI WF E E+ Sbjct: 3 LERTFSMIKPDATRRNLTGAITKMLEDAGLRVIASKRVWMSKREAEKFYAVHKERPFFSELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPSDAEEGTIRKVHALSIGENSVHGSDSAETAKTEITFWFSEIEI 138
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_SHEPW (Nucleoside diphosphate kinase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.587e-21 Identity = 47/140 (33.57%), Postives = 77/140 (55.00%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWT 694 +E T+ ++KPD V + +G + +RFE ++ +E Y + + +PFF L+ ++TSGP++ EG V + R+++G+T+P +A GTIR D A N HGSDS + +RE+ +F ELC T Sbjct: 3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIIASKMVHLSQEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHREILGATNPAEAAEGTIRADFAESIDENAAHGSDSVASAEREVAYFFSTEELCPRT 142
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_SALAR (Nucleoside diphosphate kinase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.587e-21 Identity = 50/140 (35.71%), Postives = 76/140 (54.29%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWT 694 +E T+ ++KP+ V + ++G + +RFE + + Y + + KPFF L+E++TSGP+V E V R L+G+T+P A GT+R D A N HGSDS E+ +REI +F EGE+C T Sbjct: 3 IERTFSIIKPNAVAKNVIGSIFARFEAAGFRIVGTRMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSFTENGTHGSDSLESAQREIAFFFGEGEVCPRT 142
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_CITK8 (Nucleoside diphosphate kinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.587e-21 Identity = 50/140 (35.71%), Postives = 77/140 (55.00%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWT 694 +E T+ ++KP+ V + ++G++ +RFE + + Y + + KPFF L+E++TSGP+V E V R L+G+T+P A GT+R D A N HGSDS E+ +REI +F EGE+C T Sbjct: 3 IERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSFTENGTHGSDSLESAQREIAYFFGEGEVCPRT 142
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_BURM1 (Nucleoside diphosphate kinase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.587e-21 Identity = 50/133 (37.59%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKE 673 +E T ++KPD V + ++G + SRFE + +E+ Y ++PFF L++++ SGPV+ EG G + R L+G+TDP +AE GTIR D A N VHGSD+PE EI +F E Sbjct: 3 IERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIVAARMAHLSRADAEKFYAVHAARPFFKDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETAAVEIAFFFPE 135 The following BLAST results are available for this feature:
BLAST of CK938603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938603 ID=CK938603; Name=CK938603; organism=Citrus sinensis; type=EST; length=856bpback to top |