CX675522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_MLVCB (Gag-Pol polyprotein (Fragment) OS=Cas-Br-E murine leukemia virus GN=gag-pol PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.801e-16 Identity = 75/254 (29.53%), Postives = 110/254 (43.31%), Query Frame = 1 Query: 34 IDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYGKACHLPLELEHKAHWALKKLNWDMHAAAEQRKLQLCELDELRLFSYESEKIYKERTKHWHDKHIQHKKFIPGQLVLL--HNTRLRLFLGKLKSRWSSPFKLLKSYP 786 IDF P +G Y+LV VD S W+EA AK + L + IF RFG P+V+ +D G F +K+ G+ K+ Y S+GQ + NR IK+ L K+ T RDW L L +L+ R P G++PY I+YG L + + DM LQ L L L +E + + D+ + + G V + H T+ L+ RW P+ +L + P Sbjct: 1 IDFTEVKPRLYGYKYLLVFVDTFSGWIEAFPTKKETAKVVTKKLLEEIFPRFGMPQVLGTDNGPAFVSKVSQTVADLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLATGSRDWVLLLPLALYRARNT-PGPHGLTPYEILYGAPPPL-----------VNFPDPDMTRVTNSPSLQ-AHLQALYLVQHEVWRPLAAAYQEQLDRPVVPHPYRVGDTVWVRRHQTK------NLEPRWKGPYTVLLTTP 235
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_FENV1 (Pol polyprotein (Fragment) OS=Feline endogenous virus ECE1 GN=pol PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.794e-15 Identity = 53/150 (35.33%), Postives = 73/150 (48.67%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYG 474 W IDF P + G Y+LV VD S WVEA A + + + IF RFG P+VI SD G F +++ G+ K+ Y S+GQ + NR IK+ L K+ T +DW L +L R G++PY I+YG Sbjct: 765 WEIDFTEVKPHYAGYKYLLVFVDTFSGWVEAYPTRQETAHMVAKKILEEIFPRFGLPKVIGSDNGPAFVSQVSQGLARTLGINWKLHCAYRPQSSGQVERMNRTIKETLTKLTLETGLKDWRRLLSLALLRARNT-PNRFGLTPYEILYG 913
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_KORV (Pro-Pol polyprotein OS=Koala retrovirus GN=pro-pol PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.567e-15 Identity = 53/152 (34.87%), Postives = 77/152 (50.66%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTP--LGMSPYRIVYG 474 W +DF P +GN Y+LV +D S WVEA T A T+ + + I RFG P+V+ SD G F ++ + G+ K+ Y S+GQ + NR IK+ L K+ T +DW L +L R TP G++PY I++G Sbjct: 842 WEVDFTEVKPGRYGNRYLLVFIDTFSGWVEAFPTKTETALTVCKKILEEILPRFGIPKVLGSDNGPAFVAQVSQGLATQLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLALETGGKDWVTLLPLALLRAR---NTPGQFGLTPYEILHG 990
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_GALV (Pol polyprotein OS=Gibbon ape leukemia virus GN=pol PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.567e-15 Identity = 53/152 (34.87%), Postives = 76/152 (50.00%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTP--LGMSPYRIVYG 474 W +DF P +GN Y+LV +D S WVEA T A + + + I RFG P+V+ SD G F ++ + G+ K+ Y S+GQ + NR IK+ L K+ T +DW L +L R TP G++PY I+YG Sbjct: 880 WEVDFTEIKPGRYGNKYLLVFIDTFSGWVEAFPTKTETALIVCKKILEEILPRFGIPKVLGSDNGPAFVAQVSQGLATQLGINWKLHCAYRPQSSGQVERMNRTIKETLTKLALETGGKDWVTLLPLALLRAR---NTPGRFGLTPYEILYG 1028
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_BAEVM (Pol polyprotein OS=Baboon endogenous virus (strain M7) GN=pol PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.883e-15 Identity = 53/150 (35.33%), Postives = 73/150 (48.67%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYG 474 W IDF P + G Y+LV VD S WVEA A + + + IF RFG P+VI SD G F +++ G+ K+ Y S+GQ + NR IK+ L K+ T +DW L +L R G++PY I+YG Sbjct: 908 WEIDFTEVKPHYAGYKYLLVFVDTFSGWVEAFPTRQETAHIVAKKILEEIFPRFGLPKVIGSDNGPAFVSQVSQGLARILGINWKLHCAYRPQSSGQVERMNRTIKETLTKLTLETGLKDWRRLLSLALLRARNT-PNRFGLTPYEILYG 1056
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_SFVCP (Pro-Pol polyprotein OS=Simian foamy virus (isolate chimpanzee) GN=pol PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.686e-14 Identity = 67/253 (26.48%), Postives = 105/253 (41.50%), Query Frame = 1 Query: 34 IDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPTRRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYGKACHLPLELEHKAHWALKKLNWDMHAAAEQRKLQLCELDELRLFSYESEKIYKERT-----KHWHDKHIQHKKFIPGQLVLLHNTRLRLFLGKLKSRWSSPFKLLK 777 ID++GP PP G LY+LV VD ++ + PT T T N+ + P+VI SD+GA F + FA + G+ + +T YH S+G+ + N +IK++L K++ W L A Y L +P+++++G + P A Q L L +EL L +Y+ T + W + GQLV R L+ RW P +L+ Sbjct: 878 IDYIGPLPPSQGYLYVLVIVDGMTGFT--WLYPTKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTYSPVLKYTPHQLLFGIDSNTPF--------------------ANQDTLDLTREEELSLLQEIRASLYQPSTPPASSRSWSP--------VVGQLVQERVAR----PASLRPRWHKPSTVLE 1096
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_FOAMV (Pro-Pol polyprotein OS=Human spumaretrovirus GN=pol PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.905e-14 Identity = 67/253 (26.48%), Postives = 102/253 (40.32%), Query Frame = 1 Query: 34 IDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPTRRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYGKACHLPLELEHKAHWALKKLNWDMHAAAEQRKLQLCELDELRLFSYESEKIYKERT-----KHWHDKHIQHKKFIPGQLVLLHNTRLRLFLGKLKSRWSSPFKLLK 777 ID++GP PP G LY+LV VD ++ + PT T T N+ + P+VI SD+GA F + FA + G+ + +T YH S + + N +IK++L K++ W L A Y L +P+++++G + P A Q L L +EL L +Y T + W + GQLV R L+ RW P +LK Sbjct: 878 IDYIGPLPPSQGYLYVLVVVDGMTGFT--WLYPTKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSGSKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTYSPVLKYTPHQLLFGIDSNTPF--------------------ANQDTLDLTREEELSLLQEIRTSLYHPSTPPASSRSWSP--------VVGQLVQERVAR----PASLRPRWHKPSTVLK 1096
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_SFV3L (Pro-Pol polyprotein OS=Simian foamy virus type 3 (strain LK3) GN=pol PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.427e-13 Identity = 48/161 (29.81%), Postives = 82/161 (50.93%), Query Frame = 1 Query: 10 VEVFYVWGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPTRRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYGKACHLP 492 V+ F + ID++GP PP G L++LV VD ++ +V PT T T N+ + P+VI SD+GA F + FA G++ + +T YH S+G+ + N +IK++L K++ W L A +Y +P+++++G + P Sbjct: 869 VKPFDKFFIDYIGPLPPSNGYLHVLVVVDSMTGFV--WLYPTKAPSTSATVKALNMLTSIAVPKVIHSDQGAAFTSATFADWAKNKGIQLEFSTPYHPQSSGKVERKNSDIKRLLTKLLVGRPAKWYDLLPVVQLALNNSYSPSSKYTPHQLLFGIDSNTP 1027
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_SFV1 (Pro-Pol polyprotein OS=Simian foamy virus type 1 GN=pol PE=1 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 2.434e-13 Identity = 45/153 (29.41%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 34 IDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPTRRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYGKACHLP 492 ID++GP PP G L++LV VD ++ +V PT T T N+ + P+V+ SD+GA F + FA + G++ + +T YH S+G+ + N +IK++L K++ W L A +Y +P+++++G + P Sbjct: 877 IDYIGPLPPSNGYLHVLVVVDSMTGFV--WLYPTKAPSTSATVKALNMLTSIAIPKVLHSDQGAAFTSSTFADWAKEKGIQLEFSTPYHPQSSGKVERKNSDIKRLLTKLLIGRPAKWYDLLPVVQLALNNSYSPSSKYTPHQLLFGVDSNTP 1027
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=4 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.423e-13 Identity = 54/248 (21.77%), Postives = 114/248 (45.97%), Query Frame = 1 Query: 34 IDFMGPFPPFF-GNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPTRRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYGKACHLPLELEHKAHWALKKLNWDMHAAAEQRKLQLCELDELRLFSYESEKIYKERTKHWHDKHIQHKKFIPGQLVLLHNTRLRLFLG-KLKSRWSSPFKL 771 +D +GP P GN Y + + ++K++ A + AKT+ + ++ ++G + I+D G + N I +++ +T +H + G + S+R + + + ++ + DW + L ++ + T PY +V+G+ +LP +K H N D +A + +L++ +L + +KE+ K +D ++ + G VLL N +G KL +++ P+K+ Sbjct: 970 VDTIGPLPKSENGNEYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFITDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYISTDKTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHF-NKLHSIEPIYNIDDYAKESKYRLEVAYARARKLL-----EAHKEKNKENYDLKVKDIELEVGDKVLLRNE-----VGHKLDFKYTGPYKI 1206 The following BLAST results are available for this feature:
BLAST of CX675522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675522 ID=CX675522; Name=CX675522; organism=Citrus sinensis; type=EST; length=831bpback to top |