CN187770
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_SALEP (Triosephosphate isomerase OS=Salmonella enteritidis PT4 (strain P125109) GN=tpiA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.757e-44 Identity = 110/248 (44.35%), Postives = 144/248 (58.06%), Query Frame = 1 Query: 46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774 V GNWK NG+ V ++V+ L + + ++ L K + G H+ AQN + GAFTGE SAEML ++ ++I+GHSERR E +E + K A QGL + C+GET + EAG T EV A Q A+ +++ V+AYEPVWAIGTGK ATPAQAQ VH +R +A +IA I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+AE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRK-ELAGVAGCDVAIAPPEMYIDLAKRAAA-GSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_SALDC (Triosephosphate isomerase OS=Salmonella dublin (strain CT_02021853) GN=tpiA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.757e-44 Identity = 110/248 (44.35%), Postives = 144/248 (58.06%), Query Frame = 1 Query: 46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774 V GNWK NG+ V ++V+ L + + ++ L K + G H+ AQN + GAFTGE SAEML ++ ++I+GHSERR E +E + K A QGL + C+GET + EAG T EV A Q A+ +++ V+AYEPVWAIGTGK ATPAQAQ VH +R +A +IA I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+AE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRK-ELAGVAGCDVAIAPPEMYIDLAKRAAA-GSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_SALCH (Triosephosphate isomerase OS=Salmonella choleraesuis GN=tpiA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.757e-44 Identity = 110/248 (44.35%), Postives = 144/248 (58.06%), Query Frame = 1 Query: 46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774 V GNWK NG+ V ++V+ L + + ++ L K + G H+ AQN + GAFTGE SAEML ++ ++I+GHSERR E +E + K A QGL + C+GET + EAG T EV A Q A+ +++ V+AYEPVWAIGTGK ATPAQAQ VH +R +A +IA I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+AE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRK-ELTGVAGCDVAIAPPEMYIDLAKRAAA-GSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_SALA4 (Triosephosphate isomerase OS=Salmonella agona (strain SL483) GN=tpiA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.757e-44 Identity = 110/248 (44.35%), Postives = 144/248 (58.06%), Query Frame = 1 Query: 46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774 V GNWK NG+ V ++V+ L + + ++ L K + G H+ AQN + GAFTGE SAEML ++ ++I+GHSERR E +E + K A QGL + C+GET + EAG T EV A Q A+ +++ V+AYEPVWAIGTGK ATPAQAQ VH +R +A +IA I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+AE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRK-ELTGVAGCDVAIAPPEMYIDLAKRAAA-GSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_CLOTH (Triosephosphate isomerase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=tpiA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.519e-44 Identity = 107/240 (44.58%), Postives = 136/240 (56.67%), Query Frame = 1 Query: 28 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 741 M RK GNWK N T +E + V L +G+ G+V+++ VAAQN ++ GAFTGE+S ML L + +VI+GHSERR E +E V KV A GLK I CVGE+L QRE G T E+V Q K +S+ V+AYEP+WAIGTGK AT QA+EV +R+ + ++A A RI YGGSVN AN EL P++DG LVGGASLK Sbjct: 1 MSRKVIAAGNWKMNKTPKEAVEFVQAL-KGRVADADTEVVVGVPFVCLPGVVEAAKGSNIKVAAQNMHWEEKGAFTGEVSGPMLAELGVDYVIIGHSERRQYFGETDETVNKKVHAAFKYGLKPIICVGESLTQREQGVTAELVRYQVKIALLGLSAEQVKEAVIAYEPIWAIGTGKTATNEQAEEVCGIIRECIKELYGQDVAEAIRIQYGGSVNAANAAELFNMPNIDGGLVGGASLK 239
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPW (Triosephosphate isomerase OS=Pseudomonas putida (strain W619) GN=tpiA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.820e-44 Identity = 105/251 (41.83%), Postives = 146/251 (58.17%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVK-KGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 771 R+ V GNWK +GT V ++ L G F+ V L+ G V AQN V+ + GA TGE++ L + +V++GHSERR ++ E E + K A A GL + C+GETLE+REAG T+EVV Q ++ D +++++N V+AYEPVWAIGTG A+P QAQ+VH +RK L A + E+A +++YGGSV AN EL PD+DG L+GGASL EF I ++A Sbjct: 2 RRPMVAGNWKMHGTRASVAELTQGL--GNMLIPEGIEVAVFPPALFINEVIDGLKGKGITVGAQNSAVQPEQGALTGEVAPSQLAEVGCKFVLIGHSERRQVIGESEEVLNRKFAAAQKSGLTPVLCIGETLEEREAGKTLEVVGRQLSSVIDAFGIAAFANAVIAYEPVWAIGTGLTASPQQAQDVHAAIRKQLAAKDA-EVAQNVQLLYGGSVKAANAAELFGMPDIDGGLIGGASLNADEFGAICRAA 249
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_METCA (Triosephosphate isomerase OS=Methylococcus capsulatus GN=tpiA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.820e-44 Identity = 111/254 (43.70%), Postives = 145/254 (57.09%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSS-LRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAEL 777 R+ V GNWK NG + V ++++ + G F+ + ++S + G V AQN GAFTGEISA ML I+GHSERRL+ E NE V + A+ LK I CVGETLEQRE G T+ V+ AQ + + V S + V+AYEPVWA+GTG+ AT QAQEVH+ +R L+A +PE+A A +IIYGGSV N EL A PD+DG L+GGASL F+ I S + Sbjct: 2 RRPLVVGNWKMNGRSASVARLLNDILAG----IGDCKAEVGVCVPFVYIPQASEILKGTKVMLGAQNVADHNSGAFTGEISAGMLREFGCELAIVGHSERRLLYGESNELVASRYEQAIQGHLKPILCVGETLEQREQGRTLAVIGAQIDTVFEFAGVQSLEHAVIAYEPVWAVGTGRSATTGQAQEVHYHIRS-LIARWNPEVAQAVQIIYGGSVKPENSAELFAMPDIDGGLIGGASLDARAFLSICHSVSV 250
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPG (Triosephosphate isomerase OS=Pseudomonas putida (strain GB-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.282e-43 Identity = 108/251 (43.03%), Postives = 147/251 (58.57%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVK-KGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 771 R+ V GNWK +GT V ++ L+ F+ V L V AQN V+ + GA TGE++ E LV V++GHSERR ++ E +E + K A A ++GLK + C+GETLE+REAG T+EVV Q +I + V +++N V+AYEPVWAIGTG ATP QAQ+VH +R L A + E+AA +++YGGSV AN EL PD+DG L+GGASL EF I ++A Sbjct: 2 RRPMVAGNWKMHGTRASVAELTEGLSN--LALPSGVEVAVFPPALFINQVIDGLAGKEITVGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQVIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFANAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAEDA-EVAAKVQLLYGGSVKAANAAELFGMPDIDGGLIGGASLNADEFGAICRAA 249
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_BACC1 (Triosephosphate isomerase OS=Bacillus cereus (strain ATCC 10987) GN=tpiA PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.282e-43 Identity = 110/251 (43.82%), Postives = 142/251 (56.57%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLG-LVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQ-TKAIADRVSSWSNI-VLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKSAE 774 RK + GNWK N T E V + +GQ FL LV ++ V AQN +K GAFTGEIS L +L++ +V+LGHSERR + E +E V K A GL I C GETLE+RE+G T ++VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SP A A RI YGGSV N KE AQ D+DG LVGGASL+P F+ ++++ + Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPAAAEAVRIQYGGSVKPENIKEYMAQSDIDGALVGGASLEPASFLGLLEAVK 251
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_SALTI (Triosephosphate isomerase OS=Salmonella typhi GN=tpiA PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.675e-43 Identity = 109/248 (43.95%), Postives = 143/248 (57.66%), Query Frame = 1 Query: 46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774 V GNWK NG+ V ++V+ L + + ++ L K + G H+ AQN + GAFTGE SAEML ++ ++I+GHSERR E +E + K A QGL + C+GET + EAG T EV A Q + +++ V+AYEPVWAIGTGK ATPAQAQ VH +R +A +IA I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+AE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRK-ELTGVAGCDVAIAPPEMYIDLAKRAAA-GSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDTVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250 The following BLAST results are available for this feature:
BLAST of CN187770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187770 ID=CN187770; Name=CN187770; organism=Citrus sinensis; type=EST; length=817bpback to top |