CN187770

Overview
NameCN187770
Unique NameCN187770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_ECOUT (Triosephosphate isomerase OS=Escherichia coli (strain UTI89 / UPEC) GN=tpiA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.732e-43
Identity = 109/248 (43.95%), Postives = 141/248 (56.85%), Query Frame = 1 
Query:   46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774
            V GNWK NG+   V ++VS L + +                ++ + K     G H+   AQN  +   GAFTGE SA ML ++   ++I+GHSERR    E +E +  K A    QGL  + C+GET  + EAG T EV A Q  A+      +++   V+AYEPVWAIGTGK ATPAQAQ VH  +R   +A     IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:    6 VMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_ECOSM (Triosephosphate isomerase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=tpiA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.732e-43
Identity = 109/248 (43.95%), Postives = 141/248 (56.85%), Query Frame = 1 
Query:   46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774
            V GNWK NG+   V ++VS L + +                ++ + K     G H+   AQN  +   GAFTGE SA ML ++   ++I+GHSERR    E +E +  K A    QGL  + C+GET  + EAG T EV A Q  A+      +++   V+AYEPVWAIGTGK ATPAQAQ VH  +R   +A     IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:    6 VMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_ECOSE (Triosephosphate isomerase OS=Escherichia coli (strain SE11) GN=tpiA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.732e-43
Identity = 109/248 (43.95%), Postives = 141/248 (56.85%), Query Frame = 1 
Query:   46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774
            V GNWK NG+   V ++VS L + +                ++ + K     G H+   AQN  +   GAFTGE SA ML ++   ++I+GHSERR    E +E +  K A    QGL  + C+GET  + EAG T EV A Q  A+      +++   V+AYEPVWAIGTGK ATPAQAQ VH  +R   +A     IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:    6 VMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_ECOLU (Triosephosphate isomerase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=tpiA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.732e-43
Identity = 109/248 (43.95%), Postives = 141/248 (56.85%), Query Frame = 1 
Query:   46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774
            V GNWK NG+   V ++VS L + +                ++ + K     G H+   AQN  +   GAFTGE SA ML ++   ++I+GHSERR    E +E +  K A    QGL  + C+GET  + EAG T EV A Q  A+      +++   V+AYEPVWAIGTGK ATPAQAQ VH  +R   +A     IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:    6 VMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_ECOLI (Triosephosphate isomerase OS=Escherichia coli (strain K12) GN=tpiA PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.732e-43
Identity = 109/248 (43.95%), Postives = 141/248 (56.85%), Query Frame = 1 
Query:   46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774
            V GNWK NG+   V ++VS L + +                ++ + K     G H+   AQN  +   GAFTGE SA ML ++   ++I+GHSERR    E +E +  K A    QGL  + C+GET  + EAG T EV A Q  A+      +++   V+AYEPVWAIGTGK ATPAQAQ VH  +R   +A     IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:    6 VMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_ECOLC (Triosephosphate isomerase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=tpiA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.732e-43
Identity = 109/248 (43.95%), Postives = 141/248 (56.85%), Query Frame = 1 
Query:   46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774
            V GNWK NG+   V ++VS L + +                ++ + K     G H+   AQN  +   GAFTGE SA ML ++   ++I+GHSERR    E +E +  K A    QGL  + C+GET  + EAG T EV A Q  A+      +++   V+AYEPVWAIGTGK ATPAQAQ VH  +R   +A     IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:    6 VMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_ECOL6 (Triosephosphate isomerase OS=Escherichia coli O6 GN=tpiA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.732e-43
Identity = 109/248 (43.95%), Postives = 141/248 (56.85%), Query Frame = 1 
Query:   46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774
            V GNWK NG+   V ++VS L + +                ++ + K     G H+   AQN  +   GAFTGE SA ML ++   ++I+GHSERR    E +E +  K A    QGL  + C+GET  + EAG T EV A Q  A+      +++   V+AYEPVWAIGTGK ATPAQAQ VH  +R   +A     IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:    6 VMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_ECOL5 (Triosephosphate isomerase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=tpiA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.732e-43
Identity = 109/248 (43.95%), Postives = 141/248 (56.85%), Query Frame = 1 
Query:   46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774
            V GNWK NG+   V ++VS L + +                ++ + K     G H+   AQN  +   GAFTGE SA ML ++   ++I+GHSERR    E +E +  K A    QGL  + C+GET  + EAG T EV A Q  A+      +++   V+AYEPVWAIGTGK ATPAQAQ VH  +R   +A     IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:    6 VMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_ECOK1 (Triosephosphate isomerase OS=Escherichia coli O1:K1 / APEC GN=tpiA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.732e-43
Identity = 109/248 (43.95%), Postives = 141/248 (56.85%), Query Frame = 1 
Query:   46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774
            V GNWK NG+   V ++VS L + +                ++ + K     G H+   AQN  +   GAFTGE SA ML ++   ++I+GHSERR    E +E +  K A    QGL  + C+GET  + EAG T EV A Q  A+      +++   V+AYEPVWAIGTGK ATPAQAQ VH  +R   +A     IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:    6 VMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
[Close]
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_ECOHS (Triosephosphate isomerase OS=Escherichia coli O9:H4 (strain HS) GN=tpiA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.732e-43
Identity = 109/248 (43.95%), Postives = 141/248 (56.85%), Query Frame = 1 
Query:   46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV--AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774
            V GNWK NG+   V ++VS L + +                ++ + K     G H+   AQN  +   GAFTGE SA ML ++   ++I+GHSERR    E +E +  K A    QGL  + C+GET  + EAG T EV A Q  A+      +++   V+AYEPVWAIGTGK ATPAQAQ VH  +R   +A     IA    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+AE
Sbjct:    6 VMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
The following BLAST results are available for this feature:
BLAST of CN187770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_ECOUT3.732e-4343.95Triosephosphate isomerase OS=Escherichia coli (str... [more]
TPIS_ECOSM3.732e-4343.95Triosephosphate isomerase OS=Escherichia coli (str... [more]
TPIS_ECOSE3.732e-4343.95Triosephosphate isomerase OS=Escherichia coli (str... [more]
TPIS_ECOLU3.732e-4343.95Triosephosphate isomerase OS=Escherichia coli O17:... [more]
TPIS_ECOLI3.732e-4343.95Triosephosphate isomerase OS=Escherichia coli (str... [more]
TPIS_ECOLC3.732e-4343.95Triosephosphate isomerase OS=Escherichia coli (str... [more]
TPIS_ECOL63.732e-4343.95Triosephosphate isomerase OS=Escherichia coli O6 G... [more]
TPIS_ECOL53.732e-4343.95Triosephosphate isomerase OS=Escherichia coli O6:K... [more]
TPIS_ECOK13.732e-4343.95Triosephosphate isomerase OS=Escherichia coli O1:K... [more]
TPIS_ECOHS3.732e-4343.95Triosephosphate isomerase OS=Escherichia coli O9:H... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P16_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187770 ID=CN187770; Name=CN187770; organism=Citrus sinensis; type=EST; length=817bp
AGGAACACACACACGCACTCGTCGAAAATGGGCAGGAAGTTCTTCGTCGG
CGGTAACTGGAAATGCAATGGAACAACTGAAGAAGTGAAAAAGATAGTGA
GCGTACTCAATGAAGGTCAAGTTCCATCTTCTGATGTCGTTGAGGTCGTT
GTTAGCCCTCCGTTTGTGTTTCTTGGACTGGTGAAGAGTTCGTTGAGGCC
TGGCTTTCATGTTGCGGCACAGAATTGCTGGGTCAAGAAGGGAGGTGCTT
TCACCGGTGAGATTAGTGCGGAAATGCTCGTCAATTTGGAAATTCCTTGG
GTCATTCTTGGTCATTCTGAAAGGAGACTCATTTTGAATGAATTAAATGA
GTTTGTTGGGGATAAGGTTGCATATGCACTTTCTCAAGGTTTGAAGGTGA
TTGCTTGTGTTGGTGAGACACTTGAGCAGCGTGAAGCAGGATCTACTATG
GAAGTTGTTGCTGCACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTG
GTCAAACATTGTTTTGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGA
AGGTTGCCACTCCAGCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAA
TGGCTTCTTGCAAACACCAGTCCTGAAATTGCTGCAGCAACACGGATCAT
CTACGGAGGATCCGTAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGC
CTGATGTTGACGGATTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTC
ATTGACATCATCAAATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATT
TCAAGCGCAGTTTGCTG
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