CN187770
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_HYPNA (Triosephosphate isomerase OS=Hyphomonas neptunium (strain ATCC 15444) GN=tpiA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.518e-36 Identity = 91/243 (37.45%), Postives = 127/243 (52.26%), Query Frame = 1 Query: 46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 771 + GNWK NG + ++ V E S G + + C + GA TG+++AEML + +VI+GHSERR E + V + + AL G+ I CVGETL+QR+AG + V+ Q + + IV+AYEPVWAIGTG+VAT Q EVH +R LL + TRI+YGGS+N N E+ A +V+G L+GGASLK +F+ I + A Sbjct: 6 IAGNWKMNGLMANLAEVERVAAEVPASSEGAETLLCLPATLIHAGSAKSEGSGLKIGGETCHANEKGAHTGDLAAEMLKDAGASYVIVGHSERRADHGETDAVVAAQASAALRAGITPIICVGETLDQRDAGEVLTVITTQMAESIPEGAEAAAIVIAYEPVWAIGTGRVATSEQIAEVHTSIRN-LLVRRFGDAGRTTRILYGGSMNPGNAAEILAVAEVNGGLIGGASLKAADFLAIYRLA 247
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_FRATM (Triosephosphate isomerase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=tpiA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.518e-36 Identity = 91/242 (37.60%), Postives = 138/242 (57.02%), Query Frame = 1 Query: 55 NWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKSA 771 NWK NG + +K++ S +++ Q ++ V S L V QN GA+TGEISA ML ++ ++++GHSERR + E +E V K+ + + + C+GE+L+ R++G +V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R LLA ++A +I+YGGS+ N K++ + P+VDG L+GGASLK EF +II A Sbjct: 8 NWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSSV-YVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDEKLAKNIKIVYGGSLKAENAKDILSLPNVDGGLIGGASLKAVEFNEIINQA 247
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_ACIB3 (Triosephosphate isomerase OS=Acinetobacter baumannii (strain AB307-0294) GN=tpiA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.518e-36 Identity = 100/253 (39.53%), Postives = 140/253 (55.34%), Query Frame = 1 Query: 43 FVGGNWK-------CNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSN-IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 768 +V GNWK N EE K+++ ++ + R + VA V GA+TGE+SAE+L + +I +V++GHSERR I + E + K+ AL+ G+ VI CVGE+LEQRE G +VV Q IA V++ W N +V+AYEP+WAIGTGK A+P AQ +H ++R+ L TS + I+YGGSV N ELAA PD++G LVGGASL F I+++ Sbjct: 9 WVVGNWKMNPMRANANQLIEEFKQLLQQNQIADENCHVGVAPVSIALTTVQAQLQDAARTVYTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEILKAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLTS--AGSNIAILYGGSVKAENAVELAACPDINGALVGGASLNAASFYQIVQA 259
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHY (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae GN=tpiA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.983e-36 Identity = 95/241 (39.42%), Postives = 128/241 (53.11%), Query Frame = 1 Query: 37 KFFVGGNWKCNGTTEEVKKIVSVLN----EGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 747 K + GNWK N T E + + + E L L+ SL +AAQN GAFTGEIS +ML +L +VI+GHSERR I E +E + +K+ A L + CVGE+L + EAG T +V+ +Q AI V ++ ++AYEP+WAIGTGK AT A A++V +++ T +IYGGSVN N EL +Q +DG LVGGASL PE Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAIKS-VLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCGLIKE--------NFGKNTMVIYGGSVNSKNINELVSQKSIDGALVGGASLDPE 233
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHJ (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=tpiA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.983e-36 Identity = 95/241 (39.42%), Postives = 128/241 (53.11%), Query Frame = 1 Query: 37 KFFVGGNWKCNGTTEEVKKIVSVLN----EGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 747 K + GNWK N T E + + + E L L+ SL +AAQN GAFTGEIS +ML +L +VI+GHSERR I E +E + +K+ A L + CVGE+L + EAG T +V+ +Q AI V ++ ++AYEP+WAIGTGK AT A A++V +++ T +IYGGSVN N EL +Q +DG LVGGASL PE Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAIKS-VLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCGLIKE--------NFGKNTMVIYGGSVNSKNINELVSQKSIDGALVGGASLDPE 233
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_MYCH2 (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain 232) GN=tpiA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.983e-36 Identity = 95/241 (39.42%), Postives = 128/241 (53.11%), Query Frame = 1 Query: 37 KFFVGGNWKCNGTTEEVKKIVSVLN----EGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 747 K + GNWK N T E + + + E L L+ SL +AAQN GAFTGEIS +ML +L +VI+GHSERR I E +E + +K+ A L + CVGE+L + EAG T +V+ +Q AI V ++ ++AYEP+WAIGTGK AT A A++V +++ T +IYGGSVN N EL +Q +DG LVGGASL PE Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAIKS-VLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCGLIKE--------NFGKNTMVIYGGSVNSKNINELVSQKSIDGALVGGASLDPE 233
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_DICT6 (Triosephosphate isomerase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=tpiA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.983e-36 Identity = 98/251 (39.04%), Postives = 134/251 (53.39%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSV---LNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKS 768 R+ + NWK T E + + L++G L+K + + AQN + +K GA+TGEIS ML +L +VI+GHSERR +E NE + K+ A + GL I CVGE E+RE G T EV+ Q + + + + IV+AYEPVWAIGTG A A EV +RK + E++ RI YGGSVN N E +Q ++DG LVGGASLKP+ F +I+KS Sbjct: 2 RRKIIAANWKMYKTCAETESFIKEFIELSKGYEEKEIVICPPFTSLYVASKLLKDT---AIKLGAQNMFWEKEGAYTGEISPIMLKDLNCTYVIIGHSERRNYFSETNEMINKKIKSAFNYGLIPIFCVGEKWEERERGKTEEVITKQVREGLEGLEKENVEKIVIAYEPVWAIGTGHSAKGEDANEVAGLIRKIISEMYDTEVSQKIRIQYGGSVNPQNITEFLSQNEIDGALVGGASLKPQSFWNIVKS 249
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_DESDG (Triosephosphate isomerase OS=Desulfovibrio desulfuricans (strain G20) GN=tpiA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.983e-36 Identity = 94/248 (37.90%), Postives = 129/248 (52.02%), Query Frame = 1 Query: 37 KFFVGGNWKCNGTTEE--------VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSW---SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 747 K + NWK T +E VK + +V ++ + F G+ GF+ AQN + GA+TGEIS M+V+ W + GHSERR +L E + FVG K A+ L +GL V+ C+GETLE+RE G +V+ Q V + + +AYEPVWAIGTGKVA A+ H +R +L P A + RI+YGGSV N + + +VDG LVGGASL+ E Sbjct: 2 KKLMAANWKMYKTPQEAALTAGELVKAVGTVPDDREVLVFPPFVGLAQVAQAFSGVA------GFYCGAQNVYPADEGAYTGEISPGMIVSTGAAWALTGHSERRSVLGESSAFVGQKTAFCLEKGLNVVLCIGETLEEREGGQLEKVLRGQLSEGLSGVPAGIAPERLAIAYEPVWAIGTGKVAGTAEIAATHAVVR-GMLRELLPAAADSMRILYGGSVKPDNAAAIISLDNVDGVLVGGASLQAE 242
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_CLOTE (Triosephosphate isomerase OS=Clostridium tetani GN=tpiA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.983e-36 Identity = 97/241 (40.25%), Postives = 131/241 (54.36%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVK-SSLRPGFH--VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTK--AIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 741 RK + GNWK + T +E K+V L F+ L K + G + V AQN + ++ GAFTGE+S ML L I +VI+GHSERR E ++ V K+ A L I CVGETL+++E G T EVV+ Q K + +V+AYEP+WAIGTGK AT +A EV +R + + ++A + RI YGGSV + KE + D+DG LVGGASLK Sbjct: 8 RKAIIAGNWKMHNTIDESVKLVEEL----IPKVKEAECEVVVCPPFICLPKIREITEGTNIKVGAQNMYFEEKGAFTGEVSPLMLEKLNIDYVIIGHSERRQYFKETDQTVNKKLKAAFEHNLIPILCVGETLDEKENGVTEEVVSKQVKLGLFELKEEQVEKLVIAYEPIWAIGTGKTATSEEANEVIALIRSTVKSLYGDKVAESLRIQYGGSVKPSTIKEQMSMSDIDGALVGGASLK 244
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_CLOPS (Triosephosphate isomerase OS=Clostridium perfringens (strain SM101 / Type A) GN=tpiA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.983e-36 Identity = 96/234 (41.03%), Postives = 124/234 (52.99%), Query Frame = 1 Query: 46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 738 + GNWK + T +E K+V L L VK ++ V AQN ++ GAFTGEI+ ML + I +VI+GHSERR NE +E KV A + L I C GETLEQRE G+T +V+ AQ A + ++ +V+AYEP+WAIGTGK AT QA E +R + E+A RI YGGSV E A+ D+DG LVGGASL Sbjct: 6 IAGNWKMHYTIDEAVKLVEELKP--LVKDAKCEVVVCPTFVCLDAVKKAVEGTNIKVGAQNMHFEEKGAFTGEIAPRMLEAMNIDYVIIGHSERREYFNETDETCNKKVKAAFAHNLTPILCCGETLEQRENGTTNDVIKAQITADLEGLTKEQAEKVVIAYEPIWAIGTGKTATSDQANETIAAIRAMVAEMFGQEVADKVRIQYGGSVKPNTIAEQMAKSDIDGALVGGASL 237 The following BLAST results are available for this feature:
BLAST of CN187770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187770 ID=CN187770; Name=CN187770; organism=Citrus sinensis; type=EST; length=817bpback to top |