CN187770
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSS (Triosephosphate isomerase OS=Mycobacterium sp. (strain MCS) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.401e-34 Identity = 96/246 (39.02%), Postives = 126/246 (51.22%), Query Frame = 1 Query: 28 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 747 M RK + GNWK N E V+KI L + + + + AQ+ GA+TGEIS L L + ++GHSERR +E + V K A A G+ I C+GE L+ REAG+ +E Q + ++S V+AYEPVWAIGTG+VA A AQEV +R L +SP++AA R++YGGSVN N E+ AQ DVDG LVGGASL E Sbjct: 1 MARKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLSYGAQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQEDVDGALVGGASLDGE 246
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSK (Triosephosphate isomerase OS=Mycobacterium sp. (strain KMS) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.401e-34 Identity = 96/246 (39.02%), Postives = 126/246 (51.22%), Query Frame = 1 Query: 28 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 747 M RK + GNWK N E V+KI L + + + + AQ+ GA+TGEIS L L + ++GHSERR +E + V K A A G+ I C+GE L+ REAG+ +E Q + ++S V+AYEPVWAIGTG+VA A AQEV +R L +SP++AA R++YGGSVN N E+ AQ DVDG LVGGASL E Sbjct: 1 MARKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLSYGAQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQEDVDGALVGGASLDGE 246
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSJ (Triosephosphate isomerase OS=Mycobacterium sp. (strain JLS) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.401e-34 Identity = 96/246 (39.02%), Postives = 126/246 (51.22%), Query Frame = 1 Query: 28 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 747 M RK + GNWK N E V+KI L + + + + AQ+ GA+TGEIS L L + ++GHSERR +E + V K A A G+ I C+GE L+ REAG+ +E Q + ++S V+AYEPVWAIGTG+VA A AQEV +R L +SP++AA R++YGGSVN N E+ AQ DVDG LVGGASL E Sbjct: 1 MARKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLSYGAQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQEDVDGALVGGASLDGE 246
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_MYCGI (Triosephosphate isomerase OS=Mycobacterium gilvum (strain PYR-GCK) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.401e-34 Identity = 96/246 (39.02%), Postives = 124/246 (50.41%), Query Frame = 1 Query: 28 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 747 M RK + GNWK N E V+KI L + + + + AQ+ GA+TGEIS L L + ++GHSERR E +E V K AL GL I C+GE LE REAG+ +E + +S+ + V+AYEPVWAIGTG+VA+ A AQEV +R L S ++AA R++YGGSVN N E+ Q DVDG LVGGASL E Sbjct: 1 MTRKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDRVDVTVIPPFTDLRSVQTLVDGDKLRLTYGAQDVSQHDSGAYTGEISGAFLAKLGCTFAVVGHSERRTYHGETDELVAAKATAALKHGLTPIVCIGEQLEVREAGNHVEFNVNSLRGSLAGLSAEQIAQTVIAYEPVWAIGTGRVASAADAQEVCKAIRDELGNLASADVAAGVRVLYGGSVNAKNVGEIVGQGDVDGALVGGASLDGE 246
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBK (Triosephosphate isomerase OS=Clostridium botulinum (strain Okra / Type B1) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.401e-34 Identity = 94/240 (39.17%), Postives = 121/240 (50.42%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSVLNE--GQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 741 R + GNWK N T +E ++V L L VK S V AQN ++ GA+TGEI+ +ML L + +VI+GHSERR NE +E V KV A L I C GE+LE+RE T +V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + +A RI YGGSV K A+ ++DG LVGGASLK Sbjct: 2 RTAIIAGNWKMNKTVKEAVELVKELKPLVKDAKCDVVVCPTYVCLPAVLEEVKGS---NIKVGAQNMHFEESGAYTGEIAPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKDMYGESVADKVRIQYGGSVKPGTIKAQMAKEEIDGALVGGASLK 238
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_PHYAS (Triosephosphate isomerase OS=Phytoplasma australiense GN=tpiA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.212e-34 Identity = 85/245 (34.69%), Postives = 135/245 (55.10%), Query Frame = 1 Query: 46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQ-TKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 771 + GNWK E + + +N L ++ + P + AQN + + GAFTGEIS LV+L + +V+LGHSERR++ E ++ V K+ AL L + C+GETLE +E T E + Q T+A+ D I++AYEPVWAIGTGK A+P +A + ++R+ + S ++ + +I+YGGSV+ N + + Q ++DG LVG ASL+ +F++ ++A Sbjct: 10 IAGNWKMYKDKNEALEFIQKVNFS-IPNSKEVETIIFAQSTLLDVLVQNQGPNLKIGAQNAFHESEGAFTGEISPLNLVSLGVKYVLLGHSERRVLFGETDQLVNLKLLKALQNNLSPVLCLGETLETKENNKTKEFLEKQLTQALKDVPQEDLEKILIAYEPVWAIGTGKTASPQEANQTIKQIREKVTNLYSAQVVQSLKILYGGSVSSNNVEAILEQNEIDGVLVGKASLETKDFLNFTQAA 253
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS3_RHIEC (Triosephosphate isomerase (Fragment) OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.212e-34 Identity = 80/161 (49.69%), Postives = 106/161 (65.84%), Query Frame = 1 Query: 244 GAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 720 GA+TGE+SAE+L + +I +V++GHSERR E + K AL+ GLKVI CVGE+LEQRE+G VV Q +A V++ W +IV+AYEP+WAIGTGK A+P AQ +H ++R+ L TS A I+YGGSV N ELAA PD++G L Sbjct: 68 GAYTGEVSAELLKDSQIEYVLIGHSERREYFAESAAILNAKAQNALNAGLKVIYCVGESLEQRESGQAEVVVLQQICDLASVVTAEQWPHIVIAYEPIWAIGTGKTASPEDAQTMHAKIREGLTQITSH--GANMAILYGGSVKAENAVELAACPDINGAL 226
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_POLNS (Triosephosphate isomerase OS=Polynucleobacter necessarius (strain STIR1) GN=tpiA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.203e-33 Identity = 91/252 (36.11%), Postives = 131/252 (51.98%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSVLNEG-QXXXXXXXXXXXXXXXXFL----GLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQ-TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKS 768 R V GNWK NG+ + V + G + +L L+K + AQ+ G +TGE++A ML VI+GHSERR + E++E + K L + + CVGET ++R +G E+V +Q K + + ++AYEPVWAIGTGKVA+ AQ++H +R LA + ++A+ I+YGGSV N EL A PD+DG LVGGASL P +F+ I K+ Sbjct: 2 RPLIVIGNWKMNGSLANNQDWVKTVARGMESGMPSGRKYAVCPPFPYLQQCADLIKGHSLAFLSLGAQDASAYGSGVYTGEVAAAMLKEFGCTCVIVGHSERRQMHQEVDEVIASKALQVLDNSMTPVICVGETADERNSGRAQEIVCSQVAKQVGVLQDRLVDCLIAYEPVWAIGTGKVASAQVAQDMHRAIR-LQLAEFNEDVASHVGILYGGSVKPDNAVELFAMPDIDGGLVGGASLSPQDFLAICKA 252
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_MYCLE (Triosephosphate isomerase OS=Mycobacterium leprae GN=tpiA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.203e-33 Identity = 94/243 (38.68%), Postives = 124/243 (51.03%), Query Frame = 1 Query: 28 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 738 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG+IS L L +V++GHSERR +E + V K A AL L I C+GE LE RE G + Q + +S N+V+ YEPVWAIGTG+VA+ A AQEV +RK L A SP++A R++YGGS+N N ++ AQ DVDG LVGGASL Sbjct: 1 MSRKSLIAGNWKMNLNHFEAIALVQKIAFSLPDKYYDKVDVTVLPPFTDLRSVQTLVDGDKLRLTYGAQDLSQHDLGAYTGDISGAFLAKLGCSFVLVGHSERRTYHDEGDALVAAKTAAALKNSLTPIVCIGEYLEIREVGEHVSHCQNQLRGSLAGLSPEQIGNVVIVYEPVWAIGTGRVASAADAQEVCEAIRKELGALASPQVAETVRVLYGGSLNAKNIGDIVAQQDVDGGLVGGASL 243
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS1_RHIEC (Triosephosphate isomerase 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=tpiA PE=3 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 1.203e-33 Identity = 92/246 (37.40%), Postives = 130/246 (52.85%), Query Frame = 1 Query: 46 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVA--AQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAE 774 V GNWK NGT + +I ++ EG L V ++L +A AQ+C K GA TG+ISAEM+ + +VI+GHSERR E + V K A + L I C+GET ++R AG ++V+ Q A ++ N V+AYEP+WAIGTG T ++ H +R L++ E R++YGGSV AN EL +VDG L+GGASLK +F+ I ++ E Sbjct: 9 VAGNWKMNGTRASLDQIKAIA-EGVRPPLADKVEALICPPTTLLYVATALCTDSPLAIGAQDCHQKPSGAHTGDISAEMIADSFGTYVIVGHSERRTDHAETDHLVRAKAEAAFAAELTAIICIGETADERRAGQELDVIKRQLSASVPDAATAENTVIAYEPIWAIGTGVTPTSGDVEKAHAFMRAELVSRFGDE-GRKMRLLYGGSVKPANAGELLGIANVDGALIGGASLKAADFLAIYRAYE 252 The following BLAST results are available for this feature:
BLAST of CN187770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187770 ID=CN187770; Name=CN187770; organism=Citrus sinensis; type=EST; length=817bpback to top |