CN187770
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPI1_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.047e-53 Identity = 111/247 (44.94%), Postives = 154/247 (62.35%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDII 762 R+ F+GGN+KCNG+ + +K V+ + + + ++ + +AAQN +++ GA+TGE S EML ++ + VI+GHSERR I+ E +E K AL +G+ VI CVGETL++R+A TMEV AQ +A+ + W +V+AYEPVW+IGTG VATP QA+EVH LRKW E A RIIYGGS NG+NC++L P++DGFLVGGASLKPEF+ +I Sbjct: 4 RRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQ-LRIAAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVCAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLKPEFMTMI 249
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_PROA2 (Triosephosphate isomerase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tpiA PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.043e-49 Identity = 117/252 (46.43%), Postives = 144/252 (57.14%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKK----IVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774 RK V GNWK N T E + I+ L E G++ + G H+AAQNC + GAFTGE+S ML +VI+GHSERR + N V KV ALS GL VI CVGETL++RE G T EVV Q K + V+ +IV+AYEPVWAIGTGK A+ QAQEVH +R + S AA RI YGGSV +N +EL A PD+DG L+GGASL E F+ I+K+AE Sbjct: 2 RKKIVVGNWKMNKTIAEAVELSSAIIDQLGEVSASCEVGIAPAFPALSGVHGVISGT---GIHLAAQNCHYEDDGAFTGEVSVRMLDEAGCSYVIVGHSERRQYFGDTNPVVNLKVKKALSAGLNVILCVGETLDEREKGITTEVVTCQVKEGLEGVADIGDIVIAYEPVWAIGTGKTASSLQAQEVHASIRATVAGLYSEPAAAGVRIQYGGSVKPSNAEELFAMPDIDGGLIGGASLNAEDFVAIVKAAE 250
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_CHLT3 (Triosephosphate isomerase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tpiA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.944e-49 Identity = 120/254 (47.24%), Postives = 146/254 (57.48%), Query Frame = 1 Query: 34 RKFFVGGNWKCN----GTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTK-AIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774 RK FV GNWK N G +I+ +L + ++ S +AAQNC+ + GA+TGEISA ML N +VILGHSERR NE +E V KV ALS L VI CVGETLEQRE+G T VV Q + + D ++V+AYEPVWAIGTGK ATP QAQEVH +R + E+A RI YGGSV +N KEL PD+DG L+GGASL E F++IIKSAE Sbjct: 2 RKKFVAGNWKMNKDLLGAVSLATEILQLLGDEAPTCEVAIAPTFLCQQAVFQVIDES---AIKLAAQNCFYEDQGAYTGEISAAMLRNSGCEYVILGHSERRQYFNETDEIVNKKVKNALSVELDVIMCVGETLEQRESGVTKSVVETQVRGGLKDLTAEDMKSVVIAYEPVWAIGTGKTATPEQAQEVHAFIRGIVKDMFGEEVANELRIQYGGSVKTSNAKELFGMPDIDGGLIGGASLNAEDFVEIIKSAE 252
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_CHLP8 (Triosephosphate isomerase OS=Chlorobaculum parvum (strain NCIB 8327) GN=tpiA PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.259e-48 Identity = 116/249 (46.59%), Postives = 148/249 (59.44%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQT-KAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 771 R+ V GNWK N T E ++ + + E L V ++ G +AAQNC + GAFTGE+S ML +VILGHSERR + E NE V KV AL++GL+VI CVGETL++REAG T ++V AQ + +AD VS S +V+AYEPVWAIGTGK AT QAQ+VH +R + A RI YGGSV +N EL A PD+DG L+GGASLK E F+ II++A Sbjct: 2 RRTIVVGNWKMNNTIAESIELATAIAEKVGATKPECEVGIAPTFPALHEVGKTIEWSGVQLAAQNCHYENDGAFTGEVSTRMLAAAGCSYVILGHSERRQLFGETNEIVNRKVKKALAEGLRVILCVGETLDEREAGVTDKIVTAQVVEGLAD-VSDISTLVIAYEPVWAIGTGKTATKEQAQDVHASIRSTIEKLYGDSAARHLRIQYGGSVKPSNAAELFAMPDIDGGLIGGASLKVEDFMAIIEAA 249
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_BACFR (Triosephosphate isomerase OS=Bacteroides fragilis GN=tpiA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.032e-48 Identity = 112/238 (47.06%), Postives = 137/238 (57.56%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 741 RK V GNWK N T +E + LNE L V + V A+NC K+ GA+TGE+SA M+ + +VILGHSERR E E + DKV AL+ GL I C+GE LE+REA EVVAAQ ++ D +S IVLAYEPVWAIGTGK A+PAQAQE+H +R + EIA T I+YGGS +N KEL A PDVDG L+GGA+LK Sbjct: 2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKESGAYTGEVSAAMVASTGAKYVILGHSERRAYYGETVEILKDKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAALK 239
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_BACFN (Triosephosphate isomerase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=tpiA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.032e-48 Identity = 112/238 (47.06%), Postives = 137/238 (57.56%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 741 RK V GNWK N T +E + LNE L V + V A+NC K+ GA+TGE+SA M+ + +VILGHSERR E E + DKV AL+ GL I C+GE LE+REA EVVAAQ ++ D +S IVLAYEPVWAIGTGK A+PAQAQE+H +R + EIA T I+YGGS +N KEL A PDVDG L+GGA+LK Sbjct: 2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKESGAYTGEVSAAMVASTGAKYVILGHSERRAYYGETVEILKDKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAALK 239
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_MAGSM (Triosephosphate isomerase OS=Magnetococcus sp. (strain MC-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.121e-47 Identity = 110/241 (45.64%), Postives = 137/241 (56.85%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKA----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 741 R+ + GNWK NGTT+ + + + +G L V+ + G + AQN V GAFTGEIS EML ++ +VILGHSERR + E NE V KVA A GL I CVGETLEQREA TM+V+ Q A + + +V+AYEPVWAIGTGKVA+ AQAQE H +R L +A A RI+YGGS+ N KEL Q DVDG L+GGA+LK Sbjct: 2 RRALIAGNWKLNGTTQAATALATAVRDGVAANKPDCDVLVCPTFTVLSAVQGVVAGSGVDLGAQNMAVASSGAFTGEISGEMLKDVGCSYVILGHSERRTLFGETNEQVAQKVASAYRDGLTPILCVGETLEQREAEQTMQVLEQQLLACLPVLPADAAKQQQLVVAYEPVWAIGTGKVASTAQAQEAHAFIRGLLAKELGANVADAVRILYGGSMKPDNAKELLGQADVDGGLIGGAALK 242
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_PSEU5 (Triosephosphate isomerase OS=Pseudomonas stutzeri (strain A1501) GN=tpiA PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.114e-46 Identity = 113/250 (45.20%), Postives = 147/250 (58.80%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKG-GAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 771 R+ V GNWK NGT V +++ Q ++ V AQ+C ++ G GA TGE+SA+ LV+L WV++GHSERRL+L E +E V K A A + GLK + C+GETLE+REAG T+EVVA Q + D V ++ + V+AYEPVWAIG+G ATP QAQEVH +R LA + IA R++YGGSV N EL A D+DG LVGGASLK EF I ++A Sbjct: 2 RRPMVAGNWKMNGTRASVAELIESFRR-QALPAAVEIAVFPSFVHVSQVLDVVDGVQVSVGAQDCALQSGFGALTGEVSADQLVDLGCEWVLVGHSERRLVLGETDEVVSQKFAAAQAGGLKPVLCLGETLEEREAGRTLEVVARQLGQVLDDQGVEAFQSAVIAYEPVWAIGSGLTATPEQAQEVHAAIRD-QLARSDRRIAEGVRLLYGGSVKADNAAELFAMADIDGGLVGGASLKADEFGAICRAA 249
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPD (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tpiA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.761e-46 Identity = 115/253 (45.45%), Postives = 142/253 (56.13%), Query Frame = 1 Query: 34 RKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVA--AQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 771 RK V GNWK N T E ++ + L EG F L + G +A AQNC + GAFTGE+SA M+ VI GHSERR E N V KV +ALS+GL+VI C GETLEQRE G T +VV AQ + + SNIV+AYEPVWAIGTGK AT QA+EVH +R + E A RI YGGSV +N KEL + P++DG L+GGASL +F+ I+K+A Sbjct: 2 RKKIVVGNWKMNKTVTESLVLAAEVTAALGEG------FTGCDVGIAPPFTALYEVGKLTGSRLALVAQNCHFEPDGAFTGEVSASMVREAGCSAVIAGHSERRHCFGETNAIVNRKVKHALSEGLQVIMCAGETLEQREGGVTGDVVTAQVREGLLGIDDISNIVIAYEPVWAIGTGKTATSEQAEEVHLLIRNTVSDLFGEEAAGRLRIQYGGSVKPSNAKELFSMPNIDGGLIGGASLNAADFVAIVKAA 248
BLAST of CN187770 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.151e-46 Identity = 105/252 (41.67%), Postives = 152/252 (60.32%), Query Frame = 1 Query: 28 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 774 M R V GNWK NG K +++ + + +L +S++ + +QN ++ GAFTGE+SA ML + +VI+GHSERR + E + + K A+A + GL I CVGETLE+R++G+T +V Q +A+ D V++++N ++AYEPVWAIGTGK A+P QAQ VH LR++ LA P+IA + R++YGGSV N L AQ D+DG L+GGASL + FI I ++AE Sbjct: 1 MNRTPLVAGNWKMNGR----KDLLTEMADALAGYAGAAEVVICPPFPYLAAARSAMPGAVGIGSQNVSEQEDGAFTGEVSAPMLAEVGCGYVIIGHSERRALYGETDAQIASKFAHAQAAGLVPILCVGETLEERDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAYEPVWAIGTGKTASPEQAQAVHACLRQF-LAKDDPDIAQSLRLLYGGSVKADNAALLFAQSDIDGGLIGGASLTADSFIAICQAAE 247 The following BLAST results are available for this feature:
BLAST of CN187770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187770 ID=CN187770; Name=CN187770; organism=Citrus sinensis; type=EST; length=817bpback to top |