CX675515

Overview
NameCX675515
Unique NameCX675515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX675515 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = 1 
Query:  139 FSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEA--STQGFAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSL 420
            F+ + +QQ T +FS+EN++GEG  G+VY+ EL+ G+ +A K        TQ   EF + V  +   +  +I+ LLG+C +    +LVYEY  N SL
Sbjct:  485 FTIASLQQYTNNFSEENIIGEGSIGNVYRAELRHGKFLAVKKLSNTINRTQSDGEFLNLVSNVLKLKRGHILELLGYCNEFGQRLLVYEYCPNGSL 580
The following BLAST results are available for this feature:
BLAST of CX675515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
SUB_ARATH8.994e-1138.54Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62G05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62G05-N10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675515 ID=CX675515; Name=CX675515; organism=Citrus sinensis; type=EST; length=856bp
AGAAATAAACATTTTGCTTCTCCTCAGCTTGTCCAAAAGCAACGAAAAAA
TGTCTTCCGGCAGAAATCCTCAGTAGCGCCTATTCTTTGTGTTGCATGTG
GGATGAAGACTGAATTATATATGAAGGACCCTATGAAATTCAGTTTTTCT
GAAATTCAACAAGCAACAGGTGATTTCTCAAAGGAGAATTTGCTGGGAGA
GGGTGGATTTGGTCATGTCTATAAAGGTGAGCTTAAAGATGGACAGATGA
TTGCGGCAAAGGTAAGGAAAGAAGCAAGTACACAAGGATTTGCAGAATTT
CAGTCCGAGGTATATGTCCTAAATTTTGCACGCCACAAGAACATTGTGAT
GCTTTTGGGTTTTTGTTGCAAGGAGAACCTTAACATTTTGGTCTACGAGT
ATATCTGCAACAAGTCTCTTCATTGGCATTTATTTGGTGAGCAATTGTTG
GTCTAAATAAAAACCATCACATTTGTTGCTGGTTCTTTAGCTGCATTTCT
AGCTCTTTGTTCCAACTATAAAAATAATTTCCTCTTATTCTTCCTTTGCG
CGCGCGTGTGGCGGTGCATTGTAATTTCACAGATAATACAGAATCTGTTC
TTGAGTGGCACCAAAGATATGCTGCTGCCATTGGAACCGCGAAAGGTTTG
CGTTTTCTGCATGAAGAATGCCGTGGAGGTCCTATAATTCATAGAGACAT
GCGACCAAGCAATATACTTCTCACACATGACTTTGTTCCAATGGTAAATT
AATGTGCATATAATCTTTGATACTCTTGTTTTCCCTTGTGATGATTTGTC
ATATTTCGATGTTTTCTTGGTATTATCCTGACAGAAATTAGTGTGTTCCC
AACCTG
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