CN187769
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187769 vs. ExPASy Swiss-Prot
Match: TPIS_MYCFL (Triosephosphate isomerase OS=Mycoplasma flocculare GN=tpiA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.083e-29 Identity = 77/172 (44.77%), Postives = 105/172 (61.05%), Query Frame = -1 Query: 200 FTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDII 712 FTGEISA+ML +L + +VI+GHSERR I E+ E + +K+ A L + CVGE+L + EA T +V+ Q + V ++ ++AYEP+WAIGTGK AT A++V K + N I R+IYGGSVN N EL Q ++DG LVG ASL P EF+ I+ Sbjct: 77 FTGEISAKMLQDLAVHYVIIGHSERREIFKEIGEDLTNKILQAQKYNLIPVFCVGESLSEFEANETEKVIIGQINEVKS-VLNFEKAIIAYEPIWAIGTGKTATAQIAEQV----CKLIKNNFGKNI----RVIYGGSVNSKNINELLLQKNIDGALVGKASLDPEEFVKIL 239
BLAST of CN187769 vs. ExPASy Swiss-Prot
Match: TPIS_BRASB (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tpiA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29 Identity = 74/172 (43.02%), Postives = 103/172 (59.88%), Query Frame = -1 Query: 197 TGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIK 709 TG++SAEML + +I+GHSERR E + V K GL I CVGET +QR+AG T++++ Q + S+ +N+ +AYEPVWAIGTG T +++H +R L+ + E A RI+YGGSV +N EL A +V+G LVGGASLK +F+ I K Sbjct: 79 TGDLSAEMLADAGASAIIVGHSERRADHGESDVVVHQKTEAVWRAGLVAIVCVGETQQQRDAGQTLDILRGQLNLSLPQGSTAANLTVAYEPVWAIGTGLTPTAKDVEQIHAFIRTLLIERFNGE-GARMRILYGGSVKPSNAAELMAVANVNGALVGGASLKAADFLAIAK 249
BLAST of CN187769 vs. ExPASy Swiss-Prot
Match: TPIS_BORHD (Triosephosphate isomerase OS=Borrelia hermsii (strain DAH) GN=tpiA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29 Identity = 77/174 (44.25%), Postives = 104/174 (59.77%), Query Frame = -1 Query: 200 TGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMEVVAAQTKA--IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 709 T EIS ML+ + +VILGHSE R L + +E + K+ L K +I C+GETL +RE T++VV Q + ++ S I+LAYEPVWAIGTGK AT +AQEVH +R + + S A I YGGSVN N L + D+DG L+GGASLK + F++I+ Sbjct: 76 TSEISPSMLLEFGVDYVILGHSECRTYLGDTDEVINKKILAGLKHPFKYLILCIGETLSERENNKTLDVVLNQIRRGLMSVSESDLKRIILAYEPVWAIGTGKTATKEEAQEVHRAIRLEIESLYSTSAADDIIIQYGGSVNVDNVGGLMGENDIDGALIGGASLKADSFLNIV 249
BLAST of CN187769 vs. ExPASy Swiss-Prot
Match: TPIS_SYNJB (Triosephosphate isomerase OS=Synechococcus sp. GN=tpiA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.413e-29 Identity = 77/172 (44.77%), Postives = 98/172 (56.98%), Query Frame = -1 Query: 200 FTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDII 712 FTGEIS ML L + +VI+GHSERR E +E V ++A A GL I CVGE+ +QRE G T + Q + N+V+AYEP+WAIGTG+ +A V +R+ L P I+YGGSV N EL AQP++DG LVGGASL P EF I+ Sbjct: 79 FTGEISGPMLAELGVRYVIVGHSERRQYFGETDETVNRRLAAAQRHGLTPILCVGESQQQREQGLTESWIVGQLDRALQGI-DLENLVIAYEPIWAIGTGQTCAAQEANRVIGLIRQHLGNAQLP-------ILYGGSVKAGNIDELMAQPEIDGVLVGGASLDPQEFARIV 242
BLAST of CN187769 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBL (Triosephosphate isomerase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=tpiA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.413e-29 Identity = 75/168 (44.64%), Postives = 96/168 (57.14%), Query Frame = -1 Query: 215 FTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 712 +TGEI+ +ML L + +VI+GHSERR NE +E V KV A L I C GE+LE+RE T +V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + +A RI YGGSV K A+ ++DG LVGGASLK E Sbjct: 73 YTGEIAPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKDMYGENVADKVRIQYGGSVKPGTIKAQMAKEEIDGALVGGASLKAE 240
BLAST of CN187769 vs. ExPASy Swiss-Prot
Match: TPIS_ONYPE (Triosephosphate isomerase OS=Onion yellows phytoplasma GN=tpiA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29 Identity = 75/168 (44.64%), Postives = 100/168 (59.52%), Query Frame = -1 Query: 215 FTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 712 FTGE+S + L++L + V+LGHSERR E ++ V K+ AL L CVGE+L +E T + Q I V + NI++AYEPVWAIGTGK ATP A +V ++R + A S + + A RIIYGGSV+ AN K + QP +DG L G ASL+ E Sbjct: 77 FTGEVSPQNLLSLGVKHVLLGHSERRTFFGETDQTVNLKLLSALKHKLVPTVCVGESLLTKENNQTQVFLDQQLTNIFAGVPEEALQNIIIAYEPVWAIGTGKSATPQDANKVIEQIRDKVTALYSSQASCAMRIIYGGSVSVANIKTILEQPAIDGILAGKASLQTE 244
BLAST of CN187769 vs. ExPASy Swiss-Prot
Match: TPIS_METFK (Triosephosphate isomerase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=tpiA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.375e-29 Identity = 75/166 (45.18%), Postives = 99/166 (59.64%), Query Frame = -1 Query: 224 FTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS---NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 712 +TGE+SA ML +VI+GHSER E N + +K A A G+ I CVGETL++RE+G +A Q A+ VS + V+AYEPVWAIGT + ATP QA+ H +R+ +A P A + RIIYGGSVN N +L + PD+DG L+G SL Sbjct: 74 YTGEVSAAMLKEFGASYVIVGHSERSDAYCESNANIAEKFAIAKHYGITPIFCVGETLQERESGVMEYAIANQLDAVLS-VSGGALLDQAVIAYEPVWAIGTNRTATPEQARAAHSFIRE-RIAAMHPGAAESVRIIYGGSVNPRNAAQLLSMPDIDGGLIGRCSL 237
BLAST of CN187769 vs. ExPASy Swiss-Prot
Match: TPIS_XYLFT (Triosephosphate isomerase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=tpiA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.020e-29 Identity = 73/165 (44.24%), Postives = 100/165 (60.61%), Query Frame = -1 Query: 224 FTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 712 +TGE+SA M+ ++ + ++GHSERR +E +E V K A ALS GL+ I CVGE+L QREAG +A Q + V + ++AYEPVWAIGTG+ A P+Q Q +H +R +A I + I+YGG + N EL +Q DVDG L+GGASL Sbjct: 73 YTGEVSAAMVADVGAHYTLVGHSERREYHHEDSELVARKFAAALSAGLRPILCVGESLPQREAGQAEVAIAMQLAPVLALVGPQGVARGLIAYEPVWAIGTGRHADPSQVQAMHAFIR-GEIARQDARIGDSLLILYGGGIKPCNAAELFSQQDVDGGLIGGASL 236
BLAST of CN187769 vs. ExPASy Swiss-Prot
Match: TPIS_XYLFM (Triosephosphate isomerase OS=Xylella fastidiosa (strain M12) GN=tpiA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.020e-29 Identity = 73/165 (44.24%), Postives = 100/165 (60.61%), Query Frame = -1 Query: 224 FTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 712 +TGE+SA M+ ++ + ++GHSERR +E +E V K A ALS GL+ I CVGE+L QREAG +A Q + V + ++AYEPVWAIGTG+ A P+Q Q +H +R +A I + I+YGG + N EL +Q DVDG L+GGASL Sbjct: 73 YTGEVSAAMVADVGAHYTLVGHSERREYHHEDSELVARKFAAALSAGLRPILCVGESLPQREAGQAEVAIAMQLAPVLALVGPQGVARGLIAYEPVWAIGTGRHADPSQVQAMHAFIR-GEIARQDARIGDSLLILYGGGIKPCNAAELFSQQDVDGGLIGGASL 236
BLAST of CN187769 vs. ExPASy Swiss-Prot
Match: TPIS_XYLFA (Triosephosphate isomerase OS=Xylella fastidiosa GN=tpiA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.020e-29 Identity = 73/165 (44.24%), Postives = 100/165 (60.61%), Query Frame = -1 Query: 224 FTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 712 +TGE+SA M+ ++ + ++GHSERR +E +E V K A ALS GL+ I CVGE+L QREAG +A Q + V + ++AYEPVWAIGTG+ A P+Q Q +H +R +A I + I+YGG + N EL +Q DVDG L+GGASL Sbjct: 73 YTGEVSAAMVADVGAHYTLVGHSERREYHHEDSELVARKFAAALSAGLRPILCVGESLPQREAGQAEVAIAMQLAPVLALVGPQGVARGLIAYEPVWAIGTGRHADPSQVQAMHAFIR-GEIARQDARIGDSLLILYGGGIKPCNAAELFSQQDVDGGLIGGASL 236 The following BLAST results are available for this feature:
BLAST of CN187769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187769 ID=CN187769; Name=CN187769; organism=Citrus sinensis; type=EST; length=712bpback to top |