CX675514

Overview
NameCX675514
Unique NameCX675514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: ASK15_ARATH (SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.786e-39
Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = 2 
Query:  263 LILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEE-VRRENQWAFE 442
            LILAANYLN++GLL LTCQTVAD IK KTPEE+R+ FNI+NDF+ +EEEE +R+EN WAFE
Sbjct:  107 LILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167

HSP 2 Score: 88.9669 bits (219), Expect = 2.786e-39
Identity = 46/94 (48.94%), Postives = 60/94 (63.83%), Query Frame = 3 
Query:    3 SDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGD--------KKDDKSTEDDLKTWDADFVK-VDQNTL 257
            SDGE+F+VEE VA + Q +KH++EDDC    IPL NVT  ILS V+EYCKKHV+    D        KK D   + +L  WDA+F+K +D  T+
Sbjct:   11 SDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKHVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETI 104
[Close]
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.028e-38
Identity = 45/61 (73.77%), Postives = 50/61 (81.97%), Query Frame = 2 
Query:  260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442
            DLI+AANYLNIK LLDL CQTVADMIK  T E  RK FNI+ND++ +EEE VRRENQW FE
Sbjct:   92 DLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGFE 152

HSP 2 Score: 85.5001 bits (210), Expect = 3.028e-38
Identity = 44/86 (51.16%), Postives = 56/86 (65.12%), Query Frame = 3 
Query:    3 SDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK-HVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTL 257
            SDG +FEVEE  A + QTI HM EDDC D  IPLP VT  IL  VIEYC K HV+A       +  +++DLK WD +F++  Q+T+
Sbjct:   11 SDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKHHVDAA------NPCSDEDLKKWDKEFMEKYQSTI 90
[Close]
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: ASK16_ARATH (SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.132e-37
Identity = 39/65 (60.00%), Postives = 53/65 (81.54%), Query Frame = 2 
Query:  248 EYPLDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442
            E  + LILA NYLN++ LL LTCQTVAD +K  +PEE+R+ FNI+ND++P+EE+ +R+EN WAFE
Sbjct:  103 ETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE 167

HSP 2 Score: 88.9669 bits (219), Expect = 1.132e-37
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 3 
Query:    3 SDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKD---------DKSTEDDLKTWDADFVK-VDQNTLL 260
            SD E+FEVEE VA + + I HM++DDCAD  IPL NVT  IL+ VIEYCKKHV     D  D         ++  +++L+TWDA+F+K  D  T++
Sbjct:   11 SDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKKHVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVM 106
[Close]
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: SKP1_XENLA (S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.133e-37
Identity = 48/61 (78.69%), Postives = 57/61 (93.44%), Query Frame = 2 
Query:  260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442
            +LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW  E
Sbjct:  102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

HSP 2 Score: 74.7146 bits (182), Expect = 1.133e-37
Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 3 
Query:    3 SDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVE---AGSGDKKDDKSTEDDLKTWDADFVKVDQNTL 257
            SDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +       D+  +K T DD+  WD +F+KVDQ TL
Sbjct:    9 SDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT-DDIPVWDQEFLKVDQGTL 100
[Close]
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: SKP1_RAT (S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1 PE=2 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.133e-37
Identity = 48/61 (78.69%), Postives = 57/61 (93.44%), Query Frame = 2 
Query:  260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442
            +LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW  E
Sbjct:  102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

HSP 2 Score: 74.7146 bits (182), Expect = 1.133e-37
Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 3 
Query:    3 SDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVE---AGSGDKKDDKSTEDDLKTWDADFVKVDQNTL 257
            SDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +       D+  +K T DD+  WD +F+KVDQ TL
Sbjct:    9 SDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT-DDIPVWDQEFLKVDQGTL 100
[Close]
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: SKP1_PONAB (S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.133e-37
Identity = 48/61 (78.69%), Postives = 57/61 (93.44%), Query Frame = 2 
Query:  260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442
            +LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW  E
Sbjct:  102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

HSP 2 Score: 74.7146 bits (182), Expect = 1.133e-37
Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 3 
Query:    3 SDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVE---AGSGDKKDDKSTEDDLKTWDADFVKVDQNTL 257
            SDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +       D+  +K T DD+  WD +F+KVDQ TL
Sbjct:    9 SDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT-DDIPVWDQEFLKVDQGTL 100
[Close]
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: SKP1_MOUSE (S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.133e-37
Identity = 48/61 (78.69%), Postives = 57/61 (93.44%), Query Frame = 2 
Query:  260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442
            +LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW  E
Sbjct:  102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

HSP 2 Score: 74.7146 bits (182), Expect = 1.133e-37
Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 3 
Query:    3 SDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVE---AGSGDKKDDKSTEDDLKTWDADFVKVDQNTL 257
            SDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +       D+  +K T DD+  WD +F+KVDQ TL
Sbjct:    9 SDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT-DDIPVWDQEFLKVDQGTL 100
[Close]
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: SKP1_MACFA (S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.133e-37
Identity = 48/61 (78.69%), Postives = 57/61 (93.44%), Query Frame = 2 
Query:  260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442
            +LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW  E
Sbjct:  102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

HSP 2 Score: 74.7146 bits (182), Expect = 1.133e-37
Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 3 
Query:    3 SDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVE---AGSGDKKDDKSTEDDLKTWDADFVKVDQNTL 257
            SDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +       D+  +K T DD+  WD +F+KVDQ TL
Sbjct:    9 SDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT-DDIPVWDQEFLKVDQGTL 100
[Close]
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: SKP1_HUMAN (S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.133e-37
Identity = 48/61 (78.69%), Postives = 57/61 (93.44%), Query Frame = 2 
Query:  260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442
            +LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW  E
Sbjct:  102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

HSP 2 Score: 74.7146 bits (182), Expect = 1.133e-37
Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 3 
Query:    3 SDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVE---AGSGDKKDDKSTEDDLKTWDADFVKVDQNTL 257
            SDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +       D+  +K T DD+  WD +F+KVDQ TL
Sbjct:    9 SDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT-DDIPVWDQEFLKVDQGTL 100
[Close]
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: SKP1_CHICK (S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.133e-37
Identity = 48/61 (78.69%), Postives = 57/61 (93.44%), Query Frame = 2 
Query:  260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442
            +LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW  E
Sbjct:  102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

HSP 2 Score: 74.7146 bits (182), Expect = 1.133e-37
Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 3 
Query:    3 SDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVE---AGSGDKKDDKSTEDDLKTWDADFVKVDQNTL 257
            SDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +       D+  +K T DD+  WD +F+KVDQ TL
Sbjct:    9 SDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT-DDIPVWDQEFLKVDQGTL 100
The following BLAST results are available for this feature:
BLAST of CX675514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ASK15_ARATH2.786e-3973.77SKP1-like protein 15 OS=Arabidopsis thaliana GN=AS... [more]
ASK10_ARATH3.028e-3873.77SKP1-like protein 10 OS=Arabidopsis thaliana GN=AS... [more]
ASK16_ARATH1.132e-3760.00SKP1-like protein 16 OS=Arabidopsis thaliana GN=AS... [more]
SKP1_XENLA1.133e-3778.69S-phase kinase-associated protein 1 OS=Xenopus lae... [more]
SKP1_RAT1.133e-3778.69S-phase kinase-associated protein 1 OS=Rattus norv... [more]
SKP1_PONAB1.133e-3778.69S-phase kinase-associated protein 1 OS=Pongo abeli... [more]
SKP1_MOUSE1.133e-3778.69S-phase kinase-associated protein 1 OS=Mus musculu... [more]
SKP1_MACFA1.133e-3778.69S-phase kinase-associated protein 1 OS=Macaca fasc... [more]
SKP1_HUMAN1.133e-3778.69S-phase kinase-associated protein 1 OS=Homo sapien... [more]
SKP1_CHICK1.133e-3778.69S-phase kinase-associated protein 1 OS=Gallus gall... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62G03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62G03-N6-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675514 ID=CX675514; Name=CX675514; organism=Citrus sinensis; type=EST; length=728bp
GTTCGGACGGTGAGACGTTCGAGGTGGAGGAGACGGTGGCCCTCGAGTCG
CAGACAATCAAGCACATGGTGGAGGACGACTGCGCCGACACCGTAATCCC
GCTGCCGAATGTGACGAGCACGATTCTCTCGAAGGTTATCGAGTACTGCA
AGAAGCACGTTGAGGCTGGGTCAGGGGACAAGAAGGACGACAAGTCGACC
GAGGATGATCTCAAGACCTGGGATGCAGACTTCGTCAAGGTTGATCAGAA
TACCCTCTTGACCTAATCTTGGCCGCCAATTACCTGAACATTAAGGGTTT
GCTGGACTTGACCTGCCAAACTGTTGCAGACATGATCAAGGGGAAGACTC
CAGAGGAGATCCGCAAGACCTTCAACATCAAGAATGACTTCTCTCCCGAT
GAAGAAGAGGAGGTTCGGAGAGAGAACCAATGGGCATTCGAGTGAAGGAC
TGAAGTGATGAAGGCTCGGTAATTAATATTTGTGATAGGAATGTCGTTAT
AATGATAGTGGTCTTTTAGTATGTTGCCAGTAGGTGTCTAGTATTGAACA
TCAACATTTCCTTTTGTCGTGAACCTGTGAATGCTGCTCGATATAAATGT
CATTGAACCCTTGTCTATTGCATTATATCTTCGTTTCTTGTCTCGCAATG
CTCTTCTTTCCTGTAAATTATCTGAATTTGACCCTTTTTATACTTTAAAT
CTTCATTTTAGCTTTTAAGTTTAAAAAA
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