CK938555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938555 vs. ExPASy Swiss-Prot
Match: RS19_PYRHO (30S ribosomal protein S19P OS=Pyrococcus horikoshii GN=rps19p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.126e-31 Identity = 70/133 (52.63%), Postives = 95/133 (71.43%), Query Frame = 3 Query: 171 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 569 K+F +RG L+ L++MS +EL +L AR RR +RGL + L++K+R AK+ G+ +P+RTH R+MII+PEM+G I V+NGK F VEIKPEMIGHYL EF+ + K V+HG PGIGAT SS F+ +K Sbjct: 4 KEFRYRGYTLEQLMNMSLEELARLLPARQRRSLRRGLTPEQKKLLRKIRLAKK----GKYNKPIRTHCRDMIILPEMVGLTIYVHNGKEFVPVEIKPEMIGHYLGEFAPTRKRVQHGAPGIGATRSSMFVAVK 132
BLAST of CK938555 vs. ExPASy Swiss-Prot
Match: RS19_METJA (30S ribosomal protein S19P OS=Methanocaldococcus jannaschii GN=rps19p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.126e-31 Identity = 68/141 (48.23%), Postives = 91/141 (64.54%), Query Frame = 3 Query: 156 KKRTFKK---FSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 569 KK+ K F +RG L+ L M E KL AR RR RGL + L K++KA+R G++P +RTH R+ +I P+M+G GVYNGK F +V++ PEMIGHYL EFS++ KPV+HG PG+GAT SS F+P+K Sbjct: 12 KKQVISKKIEFRYRGYTLEELQQMPLREFAKLLPARQRRTLLRGLTPQQKKLAMKIKKARRLLNKGKEPRIIRTHCRDFVITPDMVGLTFGVYNGKEFVEVKVTPEMIGHYLGEFSLTRKPVQHGAPGMGATRSSMFVPIK 152
BLAST of CK938555 vs. ExPASy Swiss-Prot
Match: RS19_METKA (30S ribosomal protein S19P OS=Methanopyrus kandleri GN=rps19p PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.921e-31 Identity = 68/137 (49.64%), Postives = 96/137 (70.07%), Query Frame = 3 Query: 159 KRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 569 ++ + +F +RG L L+ M +E ++L AR RR +RGL + L++K+R+A+R G+KP +RTH R+MII+PEM+G I VYNGK F +V+I+PEMIGHYL EF+ + K V+HG GIGAT SS F+PLK Sbjct: 15 EKEWVEFRYRGYTLGELMKMPIEEFIELLPARQRRSLKRGLPSRHKKLLRKVRRARRLLRRGKKPPVIRTHCRDMIILPEMVGLTIAVYNGKEFKEVKIEPEMIGHYLGEFAKTRKTVEHG--GIGATRSSLFVPLK 149
BLAST of CK938555 vs. ExPASy Swiss-Prot
Match: RS19_THEON (30S ribosomal protein S19P OS=Thermococcus onnurineus (strain NA1) GN=rps19p PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.277e-31 Identity = 67/133 (50.38%), Postives = 93/133 (69.92%), Query Frame = 3 Query: 171 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 569 K+F +RG + LL+MS ++ KL AR RR +RGL + L++K+R AK+ G+ +P+RTH R+M+I+PEM+G I VYNGK F VEIK EMIGHYL EF+++ K V+HG PG+GAT SS F+ +K Sbjct: 5 KEFRYRGYTFEELLNMSLEDFAKLLPARQRRSLKRGLSPEQKKLLRKIRLAKK----GKYNKPIRTHSRDMVILPEMVGMTIHVYNGKEFVPVEIKEEMIGHYLGEFALTRKIVQHGSPGVGATRSSMFVAIK 133
BLAST of CK938555 vs. ExPASy Swiss-Prot
Match: RS19_SULTO (30S ribosomal protein S19P OS=Sulfolobus tokodaii GN=rps19p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.533e-31 Identity = 66/134 (49.25%), Postives = 92/134 (68.66%), Query Frame = 3 Query: 168 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 569 +KKF +RG LD LL+M DE +KL +R RR ++G K L++K+RK RE G+ + ++TH+R+MII+PEM+G VYNGK F + ++ PEMIGHYL EFSI+ K V+HG PG+ AT SS F+ +K Sbjct: 9 WKKFRYRGKSLDELLNMPMDEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVRE---GKYSKTIKTHVRDMIILPEMVGLKFAVYNGKEFVEFQVVPEMIGHYLGEFSITTKKVEHGEPGLKATRSSLFLAMK 139
BLAST of CK938555 vs. ExPASy Swiss-Prot
Match: RS19_STAMF (30S ribosomal protein S19P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps19p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.774e-30 Identity = 70/134 (52.24%), Postives = 91/134 (67.91%), Query Frame = 3 Query: 168 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 569 +KKF +RG L+ LL+M DE + L AR RR +RGL + L+ K+RK +++ G+K ++TH+R+MII+PEMIG I VYNGK F V I PEMIGHYL EFS + K V+HG PG+ AT SS FI LK Sbjct: 11 WKKFRYRGKTLEELLNMPMDEFIGLLPARQRRSLKRGLTMAQVKLLAKIRKVRQKKLTGKKAI-IKTHVRDMIILPEMIGLTIAVYNGKEFIPVRIVPEMIGHYLGEFSPTTKRVQHGEPGLKATRSSMFISLK 143
BLAST of CK938555 vs. ExPASy Swiss-Prot
Match: RS19_METTH (30S ribosomal protein S19P OS=Methanobacterium thermoautotrophicum GN=rps19p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.774e-30 Identity = 61/133 (45.86%), Postives = 92/133 (69.17%), Query Frame = 3 Query: 171 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 569 K+F +RG L+ L +M D+++KLF +R RR +RG + +++K+RK K+E +P +RTH R+MI++PEM+G G++NGK F +V+I+PEMIG Y EF+ + K V+HG PG+GAT S F+PLK Sbjct: 4 KEFRYRGYTLEELQEMPLDDVIKLFPSRQRRSLKRGFLPRQKKVLEKIRKIKKEGKTEGRPPVIRTHCRDMIVLPEMVGMTFGIHNGKEFVEVKIQPEMIGCYFGEFAPTRKKVEHGDPGMGATRFSMFVPLK 136
BLAST of CK938555 vs. ExPASy Swiss-Prot
Match: RS19_SULAC (30S ribosomal protein S19P OS=Sulfolobus acidocaldarius GN=rps19p PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.731e-30 Identity = 64/134 (47.76%), Postives = 92/134 (68.66%), Query Frame = 3 Query: 168 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 569 +KKF +RG L+ LL+M DE +KL +R RR +RG K L++K+RK RE G++ + ++TH+RNM+I+PEM+G VYNGK F + ++ PEMIG YL E+SI+ K V+HG PG+ AT SS F+ +K Sbjct: 9 WKKFRYRGKSLEDLLNMPMDEFIKLLPSRQRRSLKRGFSDKQRRLLEKIRKISRE---GKQNKVIKTHVRNMVILPEMVGLRFAVYNGKEFVEFQVVPEMIGRYLGEYSITTKKVEHGEPGLKATKSSLFLAMK 139
BLAST of CK938555 vs. ExPASy Swiss-Prot
Match: RS19_METS3 (30S ribosomal protein S19P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps19p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.179e-30 Identity = 61/133 (45.86%), Postives = 91/133 (68.42%), Query Frame = 3 Query: 171 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 569 K F ++G L+ L DMS +E+++LF AR RR +RG + ++ K+RK +E +P +RTH R+MI++PEM+G+ G+YNG+ F +V I+PEMIG Y EF+ + + V+HG PG+GAT SS F+PLK Sbjct: 4 KIFKYKGYTLEELQDMSLEEVMELFPARQRRSLKRGFLPRQQIVLDKMRKLNKEGSKDGRPVVIRTHCRDMIVLPEMVGTTFGIYNGQNFVEVTIEPEMIGCYFGEFAPTRQKVQHGDPGMGATRSSMFVPLK 136
BLAST of CK938555 vs. ExPASy Swiss-Prot
Match: RS19_THESM (30S ribosomal protein S19P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps19p PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.054e-29 Identity = 62/133 (46.62%), Postives = 95/133 (71.43%), Query Frame = 3 Query: 171 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 569 K+F +RG + L++MS ++L KL +R RR +RGL + L++K+R AK+ G+ +P+RTH R+M+I+PEM+G +I V+NGK F V+I+ EMIGHY+ EF+++ K V+HG PG+GAT SS F+ +K Sbjct: 5 KEFKYRGYTFEELINMSLEDLSKLLPSRQRRSLKRGLTPEQKKLLRKIRLAKK----GKYKKPIRTHSRDMVILPEMVGMMIYVHNGKEFVPVQIREEMIGHYIGEFALTRKRVQHGSPGVGATRSSMFVAIK 133 The following BLAST results are available for this feature:
BLAST of CK938555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938555 ID=CK938555; Name=CK938555; organism=Citrus sinensis; type=EST; length=818bpback to top |