EY649567

Overview
NameEY649567
Unique NameEY649567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: GBRL1_XENLA (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Xenopus laevis GN=gabarapl1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.697e-27
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            YPDR+PVIVEKA ++ +P +DK+KYLVP+DLTVGQF ++IRKRI L  E A+F FV+N +PPT A M  +Y++  +ED FLYV YS E+ +G
Sbjct:   25 YPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: GBRL1_RAT (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Rattus norvegicus GN=Gabarapl1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.697e-27
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            YPDR+PVIVEKA ++ +P +DK+KYLVP+DLTVGQF ++IRKRI L  E A+F FV+N +PPT A M  +Y++  +ED FLYV YS E+ +G
Sbjct:   25 YPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: GBRL1_MOUSE (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Mus musculus GN=Gabarapl1 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.697e-27
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            YPDR+PVIVEKA ++ +P +DK+KYLVP+DLTVGQF ++IRKRI L  E A+F FV+N +PPT A M  +Y++  +ED FLYV YS E+ +G
Sbjct:   25 YPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: GBRL1_HUMAN (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Homo sapiens GN=GABARAPL1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.697e-27
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            YPDR+PVIVEKA ++ +P +DK+KYLVP+DLTVGQF ++IRKRI L  E A+F FV+N +PPT A M  +Y++  +ED FLYV YS E+ +G
Sbjct:   25 YPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: GBRL1_CAVPO (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Cavia porcellus GN=GABARAPL1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.697e-27
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            YPDR+PVIVEKA ++ +P +DK+KYLVP+DLTVGQF ++IRKRI L  E A+F FV+N +PPT A M  +Y++  +ED FLYV YS E+ +G
Sbjct:   25 YPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: GBRL1_BOVIN (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Bos taurus GN=GABARAPL1 PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.697e-27
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            YPDR+PVIVEKA ++ +P +DK+KYLVP+DLTVGQF ++IRKRI L  E A+F FV+N +PPT A M  +Y++  +ED FLYV YS E+ +G
Sbjct:   25 YPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8I_ARATH (Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26
Identity = 51/92 (55.43%), Postives = 72/92 (78.26%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            YP RIPVI EK  ++D+P I+KKK+LVP D++VGQF+Y++  R+ LS  KA+F+FV+N LP T A+M ++Y+  KD+DGF+Y+ YS E TFG
Sbjct:   24 YPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: GBRL3_HUMAN (Gamma-aminobutyric acid receptor-associated protein-like 3 OS=Homo sapiens GN=GABARAPL3 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.133e-25
Identity = 51/92 (55.43%), Postives = 70/92 (76.09%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            YPDR+P+IVEKA ++ +P +D++KYLVP+DLT GQF  +IRKRI L  E A+F FV+N +PPT A M  +Y++  +ED FLYV YS E+ +G
Sbjct:   25 YPDRVPLIVEKAPKARVPDLDRRKYLVPSDLTDGQFYLLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDSHEEDDFLYVAYSNESVYG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8D_ORYSJ (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25
Identity = 52/93 (55.91%), Postives = 72/93 (77.42%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDE-DGFLYVTYSGENTFG 441
            YPDRIPVIVEK  RS++P ++K+KYLVP ++ VGQF++++R R+ LS   A+F+FV+N LP T  +M ++Y+  KDE DGFLY+ YS E TFG
Sbjct:   26 YPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQFIFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: LGG1_CAEEL (Protein lgg-1 OS=Caenorhabditis elegans GN=lgg-1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.933e-25
Identity = 54/92 (58.70%), Postives = 70/92 (76.09%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            YPDRIPVIVEKA +S +  +DKKKYLVP+DLTVGQF ++IRKRI+L  E A+F FV+NV+P T   M  +Y +  +ED FLY+ YS E+ +G
Sbjct:   25 YPDRIPVIVEKAPKSKLHDLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPQTMTTMGQLYQDHHEEDLFLYIAYSDESVYG 116          
The following BLAST results are available for this feature:
BLAST of EY649567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
GBRL1_XENLA2.697e-2758.70Gamma-aminobutyric acid receptor-associated protei... [more]
GBRL1_RAT2.697e-2758.70Gamma-aminobutyric acid receptor-associated protei... [more]
GBRL1_MOUSE2.697e-2758.70Gamma-aminobutyric acid receptor-associated protei... [more]
GBRL1_HUMAN2.697e-2758.70Gamma-aminobutyric acid receptor-associated protei... [more]
GBRL1_CAVPO2.697e-2758.70Gamma-aminobutyric acid receptor-associated protei... [more]
GBRL1_BOVIN2.697e-2758.70Gamma-aminobutyric acid receptor-associated protei... [more]
ATG8I_ARATH2.283e-2655.43Autophagy-related protein 8i OS=Arabidopsis thalia... [more]
GBRL3_HUMAN1.133e-2555.43Gamma-aminobutyric acid receptor-associated protei... [more]
ATG8D_ORYSJ1.480e-2555.91Autophagy-related protein 8D OS=Oryza sativa subsp... [more]
LGG1_CAEEL1.933e-2558.70Protein lgg-1 OS=Caenorhabditis elegans GN=lgg-1 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-A11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649567 ID=EY649567; Name=EY649567; organism=Citrus sinensis; type=EST; length=677bp
CCACGCGTCCGGGTTAATCCAATCTTCTTTAATCAGCAACTGCACGACGA
CGATAGCTTCATTGTATATTATATATGATAATTAACGACAATGAGTAAAA
GCAACTTCAAGATTGAGCATGAATTCGAGAAAAGGCGTGCTGAGGCGGAA
AGAATTAGGGAGAAATACCCAGATAGAATTCCGGTGATAGTGGAAAAGGC
TGAGAGAAGTGATATTCCTACAATTGACAAGAAAAAATATTTAGTCCCTG
CTGACTTAACAGTGGGTCAGTTTGTGTATGTGATACGGAAGAGAATTAAA
CTGAGCGCAGAAAAGGCAATCTTTATATTTGTGGACAATGTTCTCCCGCC
TACAGGAGCAATAATGTCTACCATATATGATGAAAAGAAGGATGAAGATG
GGTTTCTCTATGTTACTTACAGTGGTGAAAACACATTTGGATAGCATAAT
CTGCCGCTACCCTTTTTCCTCTACCAACGTTTCGTTTGTTAATCTACTCA
TCTTGAATTTAGTGTTTCTGTTTTCTGGCTTTGTGCCGGTCATAATCCGG
CTTCTTATTTACATGACCTTTTATGCTTGTATATAGCCGGTTCAAACTAT
GTGGTATCAGACTGATGATTGCGAATAATTTAAATTCGATGGAAGTGTGG
TATCAATCCCTCAAAAAAAAAAAAAAA
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