CN187760

Overview
NameCN187760
Unique NameCN187760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1006..1825. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN187760 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.352e-68
Identity = 129/248 (52.02%), Postives = 173/248 (69.76%), Query Frame = 3
Query:   78 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-P*VTPDVIAEHTVRALQRTMP 818
            ++L + A  +   GKGI+A DES GTI KR SS+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ Q T AG PF   + + G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY+ GARFAKWRAV+ IG + PS + I+ N + LARYA +CQE GLVP+VEPE+++DG HDI+   +VTE  L + + AL + +V+LEGT+LK +MV PG++     + D +AE TV  L+ T+P
Sbjct:    4 EQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAGVPFPKYMADHGIIPGIKVDKGAYPLAGCPGELVTEGLDGLRARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHALARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVP 251          
BLAST of CN187760 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 3.706e-67
Identity = 128/248 (51.61%), Postives = 169/248 (68.15%), Query Frame = 3
Query:   78 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-P*VTPDVIAEHTVRALQRTMP 818
            ++L + A  +  PGKGI+A DEST TI KR +S+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ QKT  G PF + +   G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY  GARFAKWRAV+ IG + PS   I  N++ LARYA +CQE GLVP+VEPE+++DG HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G       + + +AE TV  L+ T+P
Sbjct:    4 EQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDGVPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANSHALARYAALCQEQGLVPMVEPEVIMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAESTVMCLKSTVP 251          
BLAST of CN187760 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 6.321e-67
Identity = 129/248 (52.02%), Postives = 167/248 (67.34%), Query Frame = 3
Query:   78 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-P*VTPDVIAEHTVRALQRTMP 818
            ++L + A  +  PGKGI+A DEST TI KR S + +EN E NRRA RELL  TP    Y+SG ILF+ET+ QKT  G PF   + + G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY  GARFAKWRAV+ IG + PS   I  NA+ LARYA +CQE GLVP+VEPE+++DG HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G       + + +AE TV  L+ T+P
Sbjct:    4 EQLAETAQAMVAPGKGIIAIDESTSTIAKRFSGVGIENTEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDGVPFAKYMADHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANAHALARYAALCQEQGLVPMVEPEVIMDGDHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKGCEEQASVEEVAESTVMCLKSTVP 251          
BLAST of CN187760 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.351e-66
Identity = 139/255 (54.51%), Postives = 173/255 (67.84%), Query Frame = 3
Query:   57 CFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-*VTPDVIAEHTVRALQRTMP 818
            C  GKY +ELIK A  + + G+GILA DES  T GKRL SI VEN E NRRA RELL   PG  QY+SG ILFEETLYQ TA+GK FVDV+KE  ++PGIKVDKG V    T   +   GLDG     + YY+AGARFAKWR+V+ I P+ PS + +   A GLARYA I Q  GLVPIVEPE+L+DG HDI++C +V E + A  +K + D+ V+L+G LLKP MVTPG++      P  +AE+T++ L    P
Sbjct:   25 CAPGKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVP-CPTPTMSWCMGLDGWTSAAE-YYKAGARFAKWRSVVSI-PHGPS-IMLPRLAYGLARYAAIAQNAGLVPIVEPEVLLDGEHDIDRCLEVQEAIWAETFKYMADNKVMLQGILLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAP 275          
BLAST of CN187760 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 3.476e-57
Identity = 122/254 (48.03%), Postives = 156/254 (61.42%), Query Frame = 3
Query:   63 KGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELA-GTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP*V-TPDVIAEHTVRALQRTMP 818
            K  Y  ELI+ A  +  PGKG+LAADESTG+  KR + I + N   +RR  R L+    G  QY+SGVIL +ET+YQK   G+ F   L+  GV+PGIK D G   L  G  GE  T GLDG  +R +KYY  G RF KWR V KI     S+  +  NA  LARYAI+ Q  GLVPIVEPE+++DG HDI  C  V++ V +    AL+ H V+ EG LLKPNMV PG+E+      + +AE+TV+ L R +P
Sbjct:   19 KTPYEAELIETAKKMTAPGKGLLAADESTGSCSKRFAGIGLSNTAEHRRQYRALMLECEGFEQYISGVILHDETVYQKAKTGETFPQYLRRRGVVPGIKTDCGLEPLVEGAKGEQMTAGLDGYIKRAKKYYAMGCRFCKWRNVYKIQNGTVSEAVVRFNAETLARYAILSQLCGLVPIVEPEVMIDGTHDIETCQRVSQHVWSEVVSALHRHGVVWEGCLLKPNMVVPGAESGLKGHAEQVAEYTVKTLARVIP 272          
BLAST of CN187760 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.709e-46
Identity = 101/235 (42.98%), Postives = 144/235 (61.28%), Query Frame = 3
Query:  117 GKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGS-EAP*VTPDVIAEHTVRALQRTMP 818
            GKGILAADE+  T+G+R   + + N E NRR  RE+LF T G  +Y+ GVIL +ET  Q + +G P  ++LK+ G+  GIK+DKG ++      E  + GL+ L  RC+      A FAKWR++       PS+  INEN + LA+YAIICQ+NGLVPIVEPE+ ++G + + +  +VT ++L+   K LN   V + G L+K + VT G       TP  +A  T+RAL  T+P
Sbjct:   21 GKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQTSGSGVPLTELLKKKGIEIGIKLDKGLIDYK--EKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINENCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPKKVATFTLRALLSTIP 253          
The following BLAST results are available for this feature:
BLAST of CN187760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF1_XYLFA3.352e-6852.02Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANAC3.706e-6751.61Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP6.321e-6752.02Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_CHLRE5.351e-6654.51Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_TRYBB3.476e-5748.03Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF_ENCCU4.709e-4642.98Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187760 ID=CN187760; Name=CN187760; organism=Citrus sinensis; type=EST; length=820bp
ATGGTTTCTCCCTCTAACAAAACAAATTTTCTATCTTCAAGTAGATCACC
ATGTCTTGCTTCAAGGGCAAATACGCCGATGAGCTCATTAAAAACGCTGC
CTACATTGGCACCCCTGGAAAGGGTATCCTTGCTGCTGATGAGTCAACAG
GCACCATTGGCAAGCGTCTATCCAGCATCAATGTTGAGAATGTTGAGGCA
AACAGGCGTGCTCTCCGCGAGCTCCTTTTCTGCACTCCCGGTGCCCTTCA
GTACCTCAGTGGTGTCATCCTCTTCGAGGAGACCCTCTACCAGAAGACTG
CTGCTGGCAAGCCCTTTGTTGATGTCTTGAAGGAGGGTGGAGTCCTCCCT
GGAATTAAGGTTGACAAGGGTACTGTTGAGCTTGCTGGTACCAATGGTGA
GACCACCACCCAGGGTCTTGATGGCCTCGCCCAGCGCTGCCAGAAATACT
ATGAAGCTGGTGCTCGTTTTGCCAAATGGCGTGCTGTTCTTAAGATTGGC
CCTAATGAGCCTTCGCAGCTGGCCATCAATGAGAATGCCAATGGCCTGGC
CCGATATGCTATCATCTGCCAGGAGAATGGCCTTGTTCCCATTGTTGAAC
CTGAGATCCTTGTTGACGGTCCCCATGACATCAACAAGTGTGCTGATGTG
ACCGAGCGTGTTCTTGCTGCATGCTACAAGGCTCTGAATGACCACCATGT
CCTTCTTGAGGGTACCCTTTTGAAGCCCAACATGGTGACCCCTGGATCTG
AAGCTCCCTAAGTTACACCGGACGTGATTGCTGAACACACTGTCCGGGCC
CTGCAACGCACTATGCCTGC
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