CN187759

Overview
NameCN187759
Unique NameCN187759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1763..2425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN187759 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.291e-26
Identity = 60/122 (49.18%), Postives = 79/122 (64.75%), Query Frame = -2
Query:  298 KVTPDVIAEHTVRPLQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 663
            K +P+ IA  TV  L+RT+P AVP V FLSGGQSEEEA+ NLNA+N     +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A LG Y+G       A +SL+V ++ Y
Sbjct:   16 KYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of CN187759 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 1.686e-26
Identity = 61/122 (50.00%), Postives = 81/122 (66.39%), Query Frame = -2
Query:  298 KVTPDVIAEHTVRPLQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 663
            K +P+ IA  TV  L+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL+V ++ Y
Sbjct:  243 KYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGD-GGAAAQSLYVANHAY 363          
BLAST of CN187759 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 118.627 bits (296), Expect = 2.875e-26
Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = -2
Query:  298 KVTPDVIAEHTVRPLQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 663
            K +P+ IA  TV  L+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL++ ++ Y
Sbjct:  243 KYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGD-GGAAAQSLYIANHAY 363          
BLAST of CN187759 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.875e-26
Identity = 60/122 (49.18%), Postives = 75/122 (61.48%), Query Frame = -2
Query:  298 KVTPDVIAEHTVRPLQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 663
            K TP+ +A  TV  L RT+PAAVP++ FLSGG SEE+AT NLNA+ +    +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  243 KYTPEQVAMATVTALHRTVPAAVPSICFLSGGMSEEDATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CN187759 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.093e-25
Identity = 63/122 (51.64%), Postives = 81/122 (66.39%), Query Frame = -2
Query:  298 TPDVIAEHTVRPLQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGD--AQLGEGAAESLHVKDYKY 657
            TP   A  TVR LQRT+P AVP + FLSGGQSE +AT+NLN +N++   KPW+L+FSFGRALQ S L  W GK+ENV  AQ   L   KAN  A +G ++G+    LG+   +SL V ++ Y
Sbjct:  245 TPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGD---KSLFVANHAY 363          
BLAST of CN187759 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.427e-25
Identity = 60/109 (55.05%), Postives = 74/109 (67.89%), Query Frame = -2
Query:  337 KVTPDVIAEHTVRPLQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 663
            K +P  +AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E
Sbjct:  232 KASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEE 338          
BLAST of CN187759 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.336e-23
Identity = 61/122 (50.00%), Postives = 76/122 (62.30%), Query Frame = -2
Query:  298 KVTPDVIAEHTVRPLQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 663
            K +   IA  TV  L+RT+P AV  V FLSGGQSEEEA+ NLNA+N     KPW+L+FS+GRALQ S L AW G +EN + A   FL R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  243 KFSNQEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDG-SAGQSLYVANHAY 363          
BLAST of CN187759 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.629e-23
Identity = 58/122 (47.54%), Postives = 75/122 (61.48%), Query Frame = -2
Query:  298 KVTPDVIAEHTVRPLQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 663
            K + + IA  TV  L+RT+P AV  V FLSGGQSEEEA+ NLN++N     KPW L+FS+GRALQ S L AW G + N + A   F+ R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  243 KYSSEEIAMATVTALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCG-AAGQSLYVANHAY 363          
BLAST of CN187759 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.290e-22
Identity = 56/122 (45.90%), Postives = 73/122 (59.84%), Query Frame = -2
Query:  298 KVTPDVIAEHTVRPLQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 663
            K + + +A  TV  L+RT+P AV  V FLSGGQSEEEA+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+ EN   A   F+ R + NS A+ G Y            S ++  Y Y
Sbjct:  243 KYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
BLAST of CN187759 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.572e-22
Identity = 50/77 (64.94%), Postives = 59/77 (76.62%), Query Frame = -2
Query:  433 KVTPDVIAEHTVRPLQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 663
            K TP+ IA  TV  L RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:   24 KYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
The following BLAST results are available for this feature:
BLAST of CN187759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOC_CHICK1.291e-2649.18Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALDOC_RAT1.686e-2650.00Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOC_MOUSE2.875e-2649.18Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOB_RAT2.875e-2649.18Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALF_SCHMA1.093e-2551.64Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALFC2_PEA1.427e-2555.05Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALDOC_CARAU1.336e-2350.00Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDCB_DANRE6.629e-2347.54Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDCA_DANRE3.290e-2245.90Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF_LYMST9.572e-2264.94Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187759 ID=CN187759; Name=CN187759; organism=Citrus sinensis; type=EST; length=664bp
TTTTTTTTTTTTTTTTTAGCACAAGAAAACATTATCAATCATGTGACAAA
ATCACAGAAATTTAGTGCCATTAGGGGAAAGGAAAAAAAAAGAAAAACAA
AAACAAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAA
ACCGAAGTTCCCAAGCTTTTTATTGCTCCACCTAAATATGAAAAAGCTCT
AAAACTATGAATGAGAATGGGCCAACCTAATGTTCATACCGCCATTTACT
CTCATAAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTA
TTTGTAGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGG
CATCACCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTG
ACAAGGAAAGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCA
TGCCTTGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAGAAGGAAAGTG
ACCATGGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTA
GCCTCCTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGC
TGCAGGCATAGTGCGTTGCAGGGGCCGGACAGTGTGTTCAGCAATCACGT
CCGGTGTAACTTTG
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