CK938536

Overview
NameCK938536
Unique NameCK938536
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938536 vs. ExPASy Swiss-Prot
Match: MAAI_CAEEL (Probable maleylacetoacetate isomerase OS=Caenorhabditis elegans GN=gst-42 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.663e-11
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 2
Query:   80 ILLDFWASMFGIRVRIALAEKGVKYEYKEQDLFNK--SPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQAR 352
            +L  +W S    RVRIALA K V YEYK  DL ++     L  +NP   K+P  + +G+ + ES  I++Y++E   D  PLLP DP +RA AR
Sbjct:    7 VLYSYWRSSCSWRVRIALALKNVDYEYKTVDLLSEEAKSKLKEINPA-AKVPTFVVDGQVITESLAIIEYLEETHPD-VPLLPKDPIKRAHAR 97          
BLAST of CK938536 vs. ExPASy Swiss-Prot
Match: GSTZ1_DIACA (Glutathione S-transferase 1 OS=Dianthus caryophyllus GN=GST1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 55/172 (31.98%), Postives = 84/172 (48.84%), Query Frame = 2
Query:   83 LLDFWASMFGIRVRIALAEKGVKYEYKEQDLF---NKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRA----------------QARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIP 541
            L  F  S    RVRIAL  KG+ +EYK  DLF   + +P  L++NP+   +PVL+H    + +S  I+ Y++E + +  PLLP D  +RA                Q    +++I++K+    + +WA     +   KK F  + K L+G  G   +  GD  G  DL L P
Sbjct:   11 LYSFSLSSCAWRVRIALHLKGLDFEYKAVDLFKGEHLTPEFLKLNPL-GYVPVLVHGDIVIADSLAIIMYLEEKFPEN-PLLPQDLQKRALNYQAANIVTSNIQPLQNLAVLNYIEEKLGSDEKLSWA-----KHHIKKGFSALEKLLKGHAG--KYATGDEVGLADLFLAP 173          
The following BLAST results are available for this feature:
BLAST of CK938536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
MAAI_CAEEL2.663e-1143.01Probable maleylacetoacetate isomerase OS=Caenorhab... [more]
GSTZ1_DIACA3.478e-1131.98Glutathione S-transferase 1 OS=Dianthus caryophyll... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004441_E07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIF_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938536 ID=CK938536; Name=CK938536; organism=Citrus sinensis; type=EST; length=783bp
GGGGATATTCATCGTTTCATTTATTCACTCACTCGCCCTTAATTCTCAGT
AAGGTTCTGTGACAATGGCGGACGAAGTGATTCTATTGGATTTCTGGGCC
AGTATGTTTGGGATAAGGGTCAGGATTGCTCTGGCAGAGAAAGGCGTCAA
GTATGAGTACAAAGAACAGGACTTGTTCAACAAGAGCCCGCTGCTTCTGC
GGATGAATCCCGTCCACAAGAAGATCCCGGTTCTTATCCATAATGGCAAA
TCGGTCTGTGAGTCATCCATCATTGTTCAGTACATTGATGAAGTCTGGAA
GGACAAGGCTCCATTGCTTCCCTACGATCCTTACCAAAGAGCTCAAGCGA
GGTTCTGGGTCGATTTTATTGACAAGAAGATGTACGATACTTCGAGGAAG
ACATGGGCCACAAAGGGAGAAGAGCAGGAGGCAGCAAAGAAGGAGTTCAT
CGAAGTTCTGAAGACCTTGGAAGGGGAGCTTGGAGACAAGCCTTTTTTCG
GAGGAGACAACTTTGGGTATGTGGATTTGTGTTTGATCCCGTACTATTGT
TGGTTTTATTCGTATGAGACATTTGGAAAGTTCAGCGTTGAGGCTGAGTG
CCCCAAATTCATTGCTTGGGTGAAGAGATGCTTGCAGAGAGAGACTGTTG
CCAAGGCACTTCCTGATGAGAAAAAAGTGTTTGAATTTGTTTCAGTGTTG
AGGGAAAAAATTAGAGTTGAGTAAAGGGATATAGCTAGACGATGAGAGAA
GTCAAAGCAGCACAATCGNNCTGCCTGCTATTT
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