CN187753

Overview
NameCN187753
Unique NameCN187753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2611 contig Csv1_Contig2611:224..955. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN187753 vs. ExPASy Swiss-Prot
Match: WRK54_ARATH (Probable WRKY transcription factor 54 OS=Arabidopsis thaliana GN=WRKY54 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 36/76 (47.37%), Postives = 44/76 (57.89%), Query Frame = -2
Query:  420 YAFQTRSQVDILD-----DGYRWRKYGQKAVKNNKFPRSYYRCTH---QGCNVKKQVQRLTKDEGVVVTTYEGMHS 623
            Y  +TRS   I++     D Y WRKYGQK + N  FPRSY RCTH   QGC   KQVQ+  +D  +   TY G H+
Sbjct:  135 YTRKTRSHARIVEAKSSEDRYAWRKYGQKEILNTTFPRSYLRCTHKPTQGCKATKQVQKQDQDSEMFQITYIGYHT 210          
BLAST of CN187753 vs. ExPASy Swiss-Prot
Match: WRK15_ARATH (Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 28/63 (44.44%), Postives = 41/63 (65.08%), Query Frame = -2
Query:  411 DILDDGYRWRKYGQKAVKNNKFPRSYYRCTH-QGCNVKKQVQRLTKDEGVVVTTYEGMHSHPI 596
            D+  D Y WRKYGQK +K +  PR YY+C+  +GC  +K V+R   D  +++ TYEG H+H +
Sbjct:  237 DVPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAADDSSMLIVTYEGDHNHSL 299          
BLAST of CN187753 vs. ExPASy Swiss-Prot
Match: WRK11_ARATH (Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = -2
Query:  417 DILDDGYRWRKYGQKAVKNNKFPRSYYRC-THQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 596
            DI  D Y WRKYGQK +K +  PR YY+C T +GC  +K V+R   D  +++ TYEG H H
Sbjct:  243 DIPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDPAMLIVTYEGEHRH 303          
BLAST of CN187753 vs. ExPASy Swiss-Prot
Match: WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = -2
Query:  414 AFQTRSQVDIL-DDGYRWRKYGQKAVKNNKFPRSYYRC-THQGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 620
            A  +RS  +++  D + WRKYGQK +K + +PR YYRC + +GC+ +KQV+R   D  ++V TY   H+HP
Sbjct:  203 AMNSRSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHP 273          
BLAST of CN187753 vs. ExPASy Swiss-Prot
Match: WRK17_ARATH (Probable WRKY transcription factor 17 OS=Arabidopsis thaliana GN=WRKY17 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = -2
Query:  417 DILDDGYRWRKYGQKAVKNNKFPRSYYRC-THQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 596
            DI  D Y WRKYGQK +K +  PR YY+C T +GC  +K V+R   D  +++ TYEG H H
Sbjct:  240 DIPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDSTMLIVTYEGEHRH 300          
BLAST of CN187753 vs. ExPASy Swiss-Prot
Match: WRK74_ARATH (Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = -2
Query:  417 DILDDGYRWRKYGQKAVKNNKFPRSYYRCTH-QGCNVKKQVQRLTKDEGVVVTTYEGMHSH 596
            DI  D Y WRKYGQK +K +  PR YY+C+  +GC  +K V+R  ++  +++ TYEG H+H
Sbjct:  259 DIPPDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCVEETSMLIVTYEGEHNH 319          
BLAST of CN187753 vs. ExPASy Swiss-Prot
Match: WRK69_ARATH (Probable WRKY transcription factor 69 OS=Arabidopsis thaliana GN=WRKY69 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = -2
Query:  393 QTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRC-THQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERSTDN 614
            ++R +V    D + WRKYGQK +K + +PR YYRC + +GC  +KQV+R   D   ++ TY   H+HP   S+ N
Sbjct:   61 KSRGEVYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPSKLMITYACDHNHPFPSSSAN 135          
BLAST of CN187753 vs. ExPASy Swiss-Prot
Match: WRK53_ARATH (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 33/59 (55.93%), Postives = 36/59 (61.02%), Query Frame = -2
Query:  420 DDGYRWRKYGQKAVKNNKFPRSYYRCTH---QGCNVKKQVQRLTKDEGVVVTTYEGMHS 587
            DD + WRKYGQK +   KFPRSYYRCTH   Q C   KQVQR   D  V   TY G H+
Sbjct:  158 DDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNCWATKQVQRSDGDATVFEVTYRGTHT 216          
BLAST of CN187753 vs. ExPASy Swiss-Prot
Match: WRK39_ARATH (Probable WRKY transcription factor 39 OS=Arabidopsis thaliana GN=WRKY39 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = -2
Query:  417 DILDDGYRWRKYGQKAVKNNKFPRSYYRCTH-QGCNVKKQVQRLTKDEGVVVTTYEGMHSH 596
            DI  D Y WRKYGQK +K +  PR YY+C+  +GC  +K V+R   +  +++ TYEG H+H
Sbjct:  259 DIPPDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCIDETSMLIVTYEGEHNH 319          
BLAST of CN187753 vs. ExPASy Swiss-Prot
Match: WRKY1_MAIZE (Protein WRKY1 OS=Zea mays PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = -2
Query:  417 DILDDGYRWRKYGQKAVKNNKFPRSYYRCTH-QGCNVKKQVQRLTKDEGVVVTTYEGMHSH 596
            DI  D + WRKYGQK +K +  PR YY+C+  +GC  +K V+R   D  +++ TYEG H+H
Sbjct:  329 DIPADEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCVDDPSMLIVTYEGDHNH 389          
The following BLAST results are available for this feature:
BLAST of CN187753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRK54_ARATH1.406e-1147.37Probable WRKY transcription factor 54 OS=Arabidops... [more]
WRK15_ARATH1.406e-1144.44Probable WRKY transcription factor 15 OS=Arabidops... [more]
WRK11_ARATH1.406e-1149.18Probable WRKY transcription factor 11 OS=Arabidops... [more]
WRK35_ARATH1.836e-1143.66Probable WRKY transcription factor 35 OS=Arabidops... [more]
WRK17_ARATH1.836e-1149.18Probable WRKY transcription factor 17 OS=Arabidops... [more]
WRK74_ARATH3.132e-1145.90Probable WRKY transcription factor 74 OS=Arabidops... [more]
WRK69_ARATH5.342e-1141.33Probable WRKY transcription factor 69 OS=Arabidops... [more]
WRK53_ARATH6.977e-1155.93Probable WRKY transcription factor 53 OS=Arabidops... [more]
WRK39_ARATH6.977e-1145.90Probable WRKY transcription factor 39 OS=Arabidops... [more]
WRKY1_MAIZE9.112e-1145.90Protein WRKY1 OS=Zea mays PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187753 ID=CN187753; Name=CN187753; organism=Citrus sinensis; type=EST; length=735bp
TTTTTTTTTTTTTCTTATGCAAATGTTTGATAGATAATAGTTCCTTTCAA
GGGCCTAGAAACTGAAGTAGATTAAAAAAAAACTCTAATAAAAAGAGAAC
AAAATAATGAACCAAATCACCAATGCAGGCAAGTTCTGTTTCTAAATTCT
AATGACTGCACACAGTACAACAAACTAAAAGGCATTGCCATAAAAATACA
ACATGTGTTCAAATTATACTAGAGAAGTATCCTGCCCAGTGCTCTGGAAA
TTTTATTTCGAGGGTTCAAGTTTATGGATGCTAGATAATTTACAACGTAT
TAAGAAGTATCTAGCCCTTTACTGCTGCTTGCTAGTTGAGGAGTGAATTA
ATAAGAAGTGTAGATTTGCATCTGGTTCAAGATGTGCTCGAAGTTATCAG
TTGATCTCTCGATGGGATGTGAATGCATTCCTTCGTAAGTTGTCACCACA
ACTCCTTCATCTTTGGTTAGTCGTTGAACTTGCTTCTTCACATTGCAGCC
TTGATGCGTGCATCGGTAGTAGCTTCTTGGAAACTTGTTGTTTTTAACAG
CTTTTTGGCCATACTTTCGCCATCTATAGCCATCATCAAGTATATCAACT
TGGCTTCGTGTTTGAAAAGCATATCTTGGCTTTCTCACCTTCTTCTCTCC
CTTTTTAATCTTTCCCATTTTCTCTCCGTTTTCAGACCCTGTTTCGTACA
ATAAAGAGCCCTCTATTTCCAGTTTTAAGTTCTAA
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