CN187753

Overview
NameCN187753
Unique NameCN187753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN187753 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = -2 
Query:  417 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 590
            ++DGY W+KYGQK VK +KFP SYY+CT+ GC  K++V+R + D  V    Y+  H+H
Sbjct:  467 VNDGYNWQKYGQKKVKGSKFPLSYYKCTYLGCPSKRKVER-SLDGQVAEIVYKDRHNH 523
The following BLAST results are available for this feature:
BLAST of CN187753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRK19_ARATH9.112e-1150.00Probable WRKY transcription factor 19 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187753 ID=CN187753; Name=CN187753; organism=Citrus sinensis; type=EST; length=735bp
TTTTTTTTTTTTTCTTATGCAAATGTTTGATAGATAATAGTTCCTTTCAA
GGGCCTAGAAACTGAAGTAGATTAAAAAAAAACTCTAATAAAAAGAGAAC
AAAATAATGAACCAAATCACCAATGCAGGCAAGTTCTGTTTCTAAATTCT
AATGACTGCACACAGTACAACAAACTAAAAGGCATTGCCATAAAAATACA
ACATGTGTTCAAATTATACTAGAGAAGTATCCTGCCCAGTGCTCTGGAAA
TTTTATTTCGAGGGTTCAAGTTTATGGATGCTAGATAATTTACAACGTAT
TAAGAAGTATCTAGCCCTTTACTGCTGCTTGCTAGTTGAGGAGTGAATTA
ATAAGAAGTGTAGATTTGCATCTGGTTCAAGATGTGCTCGAAGTTATCAG
TTGATCTCTCGATGGGATGTGAATGCATTCCTTCGTAAGTTGTCACCACA
ACTCCTTCATCTTTGGTTAGTCGTTGAACTTGCTTCTTCACATTGCAGCC
TTGATGCGTGCATCGGTAGTAGCTTCTTGGAAACTTGTTGTTTTTAACAG
CTTTTTGGCCATACTTTCGCCATCTATAGCCATCATCAAGTATATCAACT
TGGCTTCGTGTTTGAAAAGCATATCTTGGCTTTCTCACCTTCTTCTCTCC
CTTTTTAATCTTTCCCATTTTCTCTCCGTTTTCAGACCCTGTTTCGTACA
ATAAAGAGCCCTCTATTTCCAGTTTTAAGTTCTAA
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