CN187752

Overview
NameCN187752
Unique NameCN187752
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_THEEB (Acetylglutamate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=argB PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.906e-49
Identity = 106/181 (58.56%), Postives = 127/181 (70.17%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQ-KDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV +LSE+LP++Q F G+T VVKYGGAAMK  Q KD+                 RPV+VHGGGPEIN WL +  IEP F++GLRVTDA TM++V MVLVGRVNK +V+LIN+AG  AVGL G DG L  AR +     +GFVGEV  VD  VI  LV  G+IPVI+SVAAD+ GQ+YNINA
Sbjct:    7 RVRVLSEALPYLQAFAGRTFVVKYGGAAMKEEQLKDSVIRDIVFLSYVGI----RPVVVHGGGPEINTWLAKLNIEPQFKNGLRVTDAATMDVVEMVLVGRVNKEIVTLINQAGGQAVGLCGKDGNLIRAR-AKGEESIGFVGEVQGVDTRVITALVEKGYIPVISSVAADDTGQAYNINA 182          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_SYNR3 (Acetylglutamate kinase OS=Synechococcus sp. (strain RCC307) GN=argB PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.000e-48
Identity = 100/185 (54.05%), Postives = 130/185 (70.27%), Query Frame = 2
Query:  260 TPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            TP   RV++LSE+LP+IQ+FRG+ +V+KYGGAAM    +++                  PV+VHGGGPEIN WL R  IEPVF++GLRVT  +TM++V MVLVGRVNK +V+ +N+ G  AVGLSG DG L  AR +     LG VG+VA+VDP+VI PL++ G+IPVI+SVA +  GQ YNINA
Sbjct:    9 TPDVLRVEVLSEALPYIQRFRGRRVVIKYGGAAMV---REDLRDAVFRDVALLASVGVEPVVVHGGGPEINQWLNRLSIEPVFQEGLRVTCPDTMDVVEMVLVGRVNKQIVNGLNRVGGRAVGLSGADGGLVQAR-THGDGSLGLVGDVAQVDPSVIIPLLDQGYIPVISSVAPNHEGQPYNINA 189          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_PROMA (Acetylglutamate kinase OS=Prochlorococcus marinus GN=argB PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.528e-48
Identity = 99/180 (55.00%), Postives = 128/180 (71.11%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV +LSE+LP+IQKF G+ IV+KYGG+AM    K++                 +PV++HGGGPEIN WL +  I+  FRDGLR+TD+NTM+IV MVL+GRVNK +V+ INK GA+AVGL G+DG+L  ARP       G VGEVARV+  VIEPL+ +G+IPVI+SVA+   G +YNINA
Sbjct:   25 RVSVLSEALPYIQKFAGRRIVIKYGGSAMS---KESLKEAVFRDIALLSSVGAQPVIIHGGGPEINHWLTKLEIKSEFRDGLRITDSNTMDIVEMVLIGRVNKQIVNGINKVGASAVGLCGIDGKLIEARPW-GDGSYGLVGEVARVNADVIEPLIANGYIPVISSVASSVEGINYNINA 200          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_SYNS3 (Acetylglutamate kinase OS=Synechococcus sp. (strain CC9311) GN=argB PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.455e-47
Identity = 102/180 (56.67%), Postives = 128/180 (71.11%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV +LSE+LP+IQ+F G+ IVVKYGGAAM   +  +                 +PV+VHGGGPEIN WLKR  I   FRDGLRVTDA TM++V MVLVGRVNK +V+ +N+ GA+AVGLSG DGRL  ARP       G VG+VARV+P V+EPL+  G++PVI+SVAA+  G+S+NINA
Sbjct:    6 RVSVLSEALPYIQRFAGRRIVVKYGGAAMVHAELRDAVFRDIALLASVGV---QPVVVHGGGPEINTWLKRLDIRSEFRDGLRVTDAETMDVVEMVLVGRVNKQIVNGLNRLGASAVGLSGSDGRLVEARPW-GDGNHGLVGDVARVNPDVLEPLLARGYVPVISSVAANPEGESHNINA 181          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_GLOVI (Acetylglutamate kinase OS=Gloeobacter violaceus GN=argB PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.455e-47
Identity = 102/197 (51.78%), Postives = 134/197 (68.02%), Query Frame = 2
Query:  233 AATAVTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNS---AKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            A +  T   +PA+ RV +L+E+LP+IQ+F GKTIVVKYGGAAM    K+N                 +PV+VHGGGPEIN WL+R  I   F  GLRVTD  TME+V MVL G+VNKS+V +IN+AG +AVGL G DG +  ARP  ++     +GFVG++  V+P +I+ L+  GHIPV++SVA+DE GQ+YNINA
Sbjct:    5 APSCFTAIISPAD-RVQVLAEALPYIQRFAGKTIVVKYGGAAMV---KENLRDLVIRDIVFLATVGIKPVVVHGGGPEINSWLERLNIPVQFVGGLRVTDKITMEVVEMVLAGKVNKSIVQMINQAGGSAVGLCGRDGSIIEARPHQSAQLQPDIGFVGDIQSVNPKLIQSLLKEGHIPVLSSVASDENGQAYNINA 197          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_SYNJB (Acetylglutamate kinase OS=Synechococcus sp. GN=argB PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.101e-46
Identity = 103/202 (50.99%), Postives = 135/202 (66.83%), Query Frame = 2
Query:  209 KSSRSLTSAATAVTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            +++ SL+ A  +  D  T    R  IL E+LP+IQ+++G+ IV+KYGGAAM   ++                   RPVLVHGGGPEIN WL++  I   F DGLRVTDA TME+V MVLVG+VNK +V LI+ AG +AVGL G DG L  AR S   A++GFVGEV+ ++P +++ L+  G IPVI+SVAADE GQ+YNINA
Sbjct:    2 QTNSSLSEATGSACDPLT----RAQILIEALPYIQQYQGRVIVIKYGGAAMVHQER---RAEVLRDIVFLACVGIRPVLVHGGGPEINSWLQKLDIPFKFVDGLRVTDAATMEVVEMVLVGKVNKQIVQLISLAGGSAVGLCGRDGNLIKAR-SQGRAEIGFVGEVSSINPQLLQTLLEGGQIPVISSVAADETGQAYNINA 195          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_SYNPW (Acetylglutamate kinase OS=Synechococcus sp. (strain WH7803) GN=argB PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.679e-46
Identity = 99/180 (55.00%), Postives = 129/180 (71.67%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV +LSE+LP+IQ+F G+ IVVKYGGAAM   +  +                 +PV+VHGGGPEIN WLKR  I+P FR+GLRVTDA TM++V MVLVGRVNK +V+ +N+ GA AVGLSG DG L  AR   + +  G VG+VARV+P V+EPL++ G++PVI+SVAA+  G ++NINA
Sbjct:   14 RVSVLSEALPYIQRFAGRRIVVKYGGAAMVHAELQSAVFRDLALLRSVGV---QPVVVHGGGPEINHWLKRLDIDPEFREGLRVTDAATMDVVEMVLVGRVNKQIVNGLNRLGARAVGLSGSDGCLVEARAWGDGSH-GLVGDVARVNPDVLEPLLDRGYVPVISSVAANAEGVAHNINA 189          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_PORUM (Acetylglutamate kinase OS=Porphyra umbilicalis GN=argB PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.112e-46
Identity = 104/180 (57.78%), Postives = 125/180 (69.44%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV +LS+ +  +QKF  + IV+KYGGAAMK NQK                   RP+LVHGGGPEINFWL +  I P F +G+RVTD  TM+IV MVLVGRVNK LV+ INK G  +VGLSG DG L T+RPS +   LGFVGEV  VD  ++E L+N+ +IPVIASVAAD+ GQSYNINA
Sbjct:    7 RVKVLSD-VTILQKFSSRIIVIKYGGAAMK-NQK--LKDHVISDLVFLSFIGLRPILVHGGGPEINFWLDQLKILPKFENGVRVTDQPTMDIVEMVLVGRVNKDLVASINKQGGKSVGLSGKDGLLITSRPS-DKPNLGFVGEVQNVDTNLLEILINNNYIPVIASVAADKQGQSYNINA 181          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_PORPU (Acetylglutamate kinase OS=Porphyra purpurea GN=argB PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.112e-46
Identity = 104/180 (57.78%), Postives = 125/180 (69.44%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV +LS+ +  +QKF  + IV+KYGGAAMK NQK                   RP+LVHGGGPEINFWL +  I P F +G+RVTD  TM+IV MVLVGRVNK LV+ INK G  +VGLSG DG L T+RPS +   LGFVGEV  VD  ++E L+N+ +IPVIASVAAD+ GQSYNINA
Sbjct:    7 RVKVLSD-VTILQKFSSRIIVIKYGGAAMK-NQK--LKDHVISDLVFLSFIGLRPILVHGGGPEINFWLDQLKILPKFENGVRVTDQPTMDIVEMVLVGRVNKDLVASINKQGGKSVGLSGKDGLLITSRPS-DKPNLGFVGEVQNVDTNLLEILINNNYIPVIASVAADKQGQSYNINA 181          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_SYNJA (Acetylglutamate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=argB PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.982e-46
Identity = 98/180 (54.44%), Postives = 125/180 (69.44%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            R  IL E+LP+IQ+++G+ IV+KYGGAAM   ++                   RPVLVHGGGPEIN WL++  I   F DGLRVTDA TME+V MVLVG+VNK +V LI+ AG +AVGL G DG L  AR S   A++GFVGEV+ ++P +++ L+  G IPVI+SVAADE GQ+YNINA
Sbjct:    8 RAQILIEALPYIQQYQGRVIVIKYGGAAMVHQER---RAEVLRDIVFLACVGIRPVLVHGGGPEINSWLQKLDIPFKFVDGLRVTDAATMEVVEMVLVGKVNKQIVQLISLAGGSAVGLCGRDGNLIRAR-SQGRAEIGFVGEVSSINPQLVQTLLEGGQIPVISSVAADETGQAYNINA 183          
The following BLAST results are available for this feature:
BLAST of CN187752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_THEEB5.906e-4958.56Acetylglutamate kinase OS=Thermosynechococcus elon... [more]
ARGB_SYNR35.000e-4854.05Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]
ARGB_PROMA8.528e-4855.00Acetylglutamate kinase OS=Prochlorococcus marinus ... [more]
ARGB_SYNS31.455e-4756.67Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]
ARGB_GLOVI1.455e-4751.78Acetylglutamate kinase OS=Gloeobacter violaceus GN... [more]
ARGB_SYNJB2.101e-4650.99Acetylglutamate kinase OS=Synechococcus sp. GN=arg... [more]
ARGB_SYNPW4.679e-4655.00Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]
ARGB_PORUM6.112e-4657.78Acetylglutamate kinase OS=Porphyra umbilicalis GN=... [more]
ARGB_PORPU6.112e-4657.78Acetylglutamate kinase OS=Porphyra purpurea GN=arg... [more]
ARGB_SYNJA7.982e-4654.44Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187752 ID=CN187752; Name=CN187752; organism=Citrus sinensis; type=EST; length=814bp
ATGGAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGG
CCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGTCACAG
CTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCCGTCTT
CAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCGCACCG
AAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCGTAACT
GACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAATCTCT
TCCCTTCATTCAGAAATTCCGCGGAAAGACCATCGTCGTCAAATACGGCG
GCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCGTCGTA
AAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCGTCCTGTCTTGGTCCA
CGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAATCGAGC
CCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGGAGATC
GTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCTCTCAT
CAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGGGCGCC
TCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCGTTGGT
GAAGTAGCCCGCGTGGACCCCACGGTCATTGAGCCTCTGGTAAACAGTGG
ACACATACCAGTGATTGCTTCTGTGGCTGCGGATGAGTTTGGGCAATCTT
ATAACATCAATGCG
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