CN187752

Overview
NameCN187752
Unique NameCN187752
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_PSEP1 (Acetylglutamate kinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=argB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35
Identity = 82/189 (43.39%), Postives = 112/189 (59.26%), Query Frame = 2
Query:  281 DILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            ++LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTD+ TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  AR            +P    +G VGEV  V+  ++  LV    IPVIA +     G+SYNINA
Sbjct:   13 EVLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDSATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRARKLTVSRQTPEMTTPEIIDIGHVGEVVSVNTDLLNMLVKGDFIPVIAPIGVGANGESYNINA 198          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_NITEC (Acetylglutamate kinase OS=Nitrosomonas eutropha (strain C91) GN=argB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35
Identity = 83/188 (44.15%), Postives = 114/188 (60.64%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            +V+IL+E+LP+I++F  KTIV+KYGG AM    ++                   PV+VHGGGP+I+  LKR G E VF  G+RVTDA TM+IV M+L G +NK +V+LIN+ G  AVGL+G DG    A+         +     +G VGE+  +DP++I+ L     IPVIA +   E G+SYNINA
Sbjct:   10 KVEILAEALPYIRRFHNKTIVIKYGGNAMT---EEILKQSFAKDVVLLKLVGMNPVIVHGGGPQIDSMLKRVGKEGVFIQGMRVTDAETMDIVEMILGGLINKEIVNLINRHGGQAVGLTGKDGMFIRAKRMLIKDKEDAEKWINIGQVGEIEYIDPSLIKLLDARDFIPVIAPIGVGEEGESYNINA 194          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_GEOUR (Acetylglutamate kinase OS=Geobacter uraniireducens (strain Rf4) GN=argB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35
Identity = 86/190 (45.26%), Postives = 108/190 (56.84%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAK----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            + + L E+LP+I++F GKTIV+KYGG AM     +                   PV+VHGGGP+IN  LKR+GI   F  G+RVTDA TM +V MVL G+VNK +V  IN+ G  AVGLSG DG L   R      K          +GFVG++  VD T++  L   G IPVIA V     G+SYNINA
Sbjct:    7 KANTLMEALPYIRRFSGKTIVIKYGGHAMAD---EALKKSFAMDVILLKYIGINPVIVHGGGPQINETLKRYGIVSEFVKGMRVTDAATMGVVEMVLTGQVNKEVVGYINQHGGRAVGLSGKDGGLLLCRKLLQEVKKDDGTIEKVDIGFVGDITDVDSTILVTLEAGGFIPVIAPVGVGAGGESYNINA 193          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_AZOSB (Acetylglutamate kinase OS=Azoarcus sp. (strain BH72) GN=argB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35
Identity = 87/204 (42.65%), Postives = 123/204 (60.29%), Query Frame = 2
Query:  233 AATAVTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMK-PNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR---------PSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            +A + T++ TPA  + +IL+E+LP+I++F  KTIV+KYGG AM  P+ KD                   PV+VHGGGP+I   L + G +  F  G+RVTDA TME+V MVL G+VNK +V+LIN+AG  AVGL+G D     A+         P+ +   +G VGE+  +DP++I  L     IPVIA +   + G++YNINA
Sbjct:    2 SAASSTESVTPA-LKAEILAEALPYIKRFFDKTIVIKYGGNAMTDPHLKD----CFARDVVLLKLVGLNPVVVHGGGPQIETLLAKVGKKGEFVQGMRVTDAETMEVVEMVLGGQVNKEIVNLINQAGGKAVGLTGKDASFIRAKKLLMQKLDAPAGDVIDVGQVGEITTIDPSLISFLDQGDFIPVIAPIGVGDNGETYNINA 200          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_RHIEC (Acetylglutamate kinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=argB PE=3 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 8.279e-35
Identity = 84/197 (42.64%), Postives = 112/197 (56.85%), Query Frame = 2
Query:  257 QTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAK-----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            ++ +E +  +L+++LPF+Q++  KTIVVKYGG AM                         P++VHGGGP+I   L + GIE  F  GLRVTD  T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A  +  + K           LGFVGEV  VD T+++ L  S  IPVIA VA    G +YNINA
Sbjct:    3 ESESEIQARLLAQALPFMQRYENKTIVVKYGGHAMG---NPELGKAFASDIALLKQSGVNPIVVHGGGPQIGAMLTKMGIESKFEGGLRVTDQKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKARKTIKDPDSNIERVLDLGFVGEVVEVDRTLLDLLARSEMIPVIAPVAPGRDGATYNINA 196          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_PSEPW (Acetylglutamate kinase OS=Pseudomonas putida (strain W619) GN=argB PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.279e-35
Identity = 82/189 (43.39%), Postives = 111/189 (58.73%), Query Frame = 2
Query:  281 DILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            ++LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  A+             P    +G VGEV  V+  ++  LV    IPVIA +     G+SYNINA
Sbjct:   13 EVLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAKKLTVSRQTPEMTQPEIIDIGHVGEVVSVNTDLLNMLVKGDFIPVIAPIGVGANGESYNINA 198          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_CLOD6 (Acetylglutamate kinase OS=Clostridium difficile (strain 630) GN=argB PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.279e-35
Identity = 84/179 (46.93%), Postives = 110/179 (61.45%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNIN 811
            + + L E+LP+I+K +GKTIVVKYGG+AMK   KD                    VLVHGGG EIN  L +  IE  F +GLR TD  TMEIV MVL G+VNK LV+ I+  G  AVGL G+D  +    P  N  +LGFVGE+ +V+  +IE  + SG+I VIA++   + G++YNIN
Sbjct:    6 KANTLIEALPYIEKHQGKTIVVKYGGSAMK---KDGLKESVMEDLVLMSYVGINIVLVHGGGAEINKMLAKVDIESKFVNGLRYTDEETMEIVKMVLAGKVNKDLVNKIHTKGGKAVGLCGIDNNMILCDPYKN-YELGFVGEIKKVNVELIESCLKSGYISVIATIGVGDDGETYNIN 180          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_CAMC5 (Acetylglutamate kinase OS=Campylobacter curvus (strain 525.92) GN=argB PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.279e-35
Identity = 83/177 (46.89%), Postives = 108/177 (61.02%), Query Frame = 2
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            ++  +LP+IQKFR K  VVKYGG+A   +   N                 + V+VHGGG +IN +L R  I+  F DGLRVTD   MEIV MVL G +NK + +L+NK GA A+G+SG D  L  AR   N+ K GFVGE+ RV+  V+  L+ +G IPV+A VA D+   SYNINA
Sbjct:   10 VIISALPYIQKFRNKIFVVKYGGSAQIDDTLKNDFVRDIALLQLVGC---KVVVVHGGGKKINSYLDRLHIKSEFVDGLRVTDKEAMEIVEMVLSGNINKEITALLNKNGARAIGVSGKDANLLKAR-ILNNGKYGFVGEIERVNTYVLNGLLENGLIPVVAPVATDDEANSYNINA 182          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_SYNAS (Acetylglutamate kinase OS=Syntrophus aciditrophicus (strain SB) GN=argB PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.081e-34
Identity = 85/197 (43.15%), Postives = 111/197 (56.35%), Query Frame = 2
Query:  257 QTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            + P E + +IL E+LP+I++F  +T+V+KYGG AM     D                   PV+VHGGGP+I  +LK+ G +  F  G+RVTD  TM IV MVLVG+VNK +V LIN AG  AVGLSG DG L  A              P    +G VG+V  ++  +I  LV  G IPVIA   A + G++YNINA
Sbjct:    5 EKPTE-KAEILLEALPYIRRFYNRTVVIKYGGHAMVD---DELKQSFAKDVLMMKYIGINPVVVHGGGPQIGSFLKKLGKDSKFIQGMRVTDEETMNIVEMVLVGKVNKEIVGLINHAGGKAVGLSGKDGSLIRAEKYYLSAEKAKDTPPEIIDIGLVGKVKEINADLITSLVRDGFIPVIAPTGAGDSGETYNINA 197          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_HYPNA (Acetylglutamate kinase OS=Hyphomonas neptunium (strain ATCC 15444) GN=argB PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.081e-34
Identity = 88/200 (44.00%), Postives = 115/200 (57.50%), Query Frame = 2
Query:  254 TQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAK-----------LGFVGEVARVDPTVIEPLV--NSGHIPVIASVAADEFGQSYNINA 814
            TQ+ A+F    LSE+LP+IQ++ G+TIVVKYGG AM      +                  PV+VHGGGP+I   L + GI   F+DGLRVTD  TME+V MVL G +NKS+V  IN+AG  AVGLSG DG L  A  +  + +           LGFVGE + VD +V+  L+  ++  IPV+A V     G  YN+NA
Sbjct:    3 TQSDAQFTARTLSEALPYIQRYAGQTIVVKYGGHAMGDA---SLALSFARDVVLLKALGLNPVIVHGGGPQIGKLLDKLGIVSEFKDGLRVTDEATMEVVEMVLSGPINKSIVRAINQAGGKAVGLSGADGNLLRAEKATRTTRDPDSHIEQIVDLGFVGEPSEVDISVLNALLQADAALIPVVAPVGVGADGARYNVNA 199          
The following BLAST results are available for this feature:
BLAST of CN187752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_PSEP16.339e-3543.39Acetylglutamate kinase OS=Pseudomonas putida (stra... [more]
ARGB_NITEC6.339e-3544.15Acetylglutamate kinase OS=Nitrosomonas eutropha (s... [more]
ARGB_GEOUR6.339e-3545.26Acetylglutamate kinase OS=Geobacter uraniireducens... [more]
ARGB_AZOSB6.339e-3542.65Acetylglutamate kinase OS=Azoarcus sp. (strain BH7... [more]
ARGB_RHIEC8.279e-3542.64Acetylglutamate kinase OS=Rhizobium etli (strain C... [more]
ARGB_PSEPW8.279e-3543.39Acetylglutamate kinase OS=Pseudomonas putida (stra... [more]
ARGB_CLOD68.279e-3546.93Acetylglutamate kinase OS=Clostridium difficile (s... [more]
ARGB_CAMC58.279e-3546.89Acetylglutamate kinase OS=Campylobacter curvus (st... [more]
ARGB_SYNAS1.081e-3443.15Acetylglutamate kinase OS=Syntrophus aciditrophicu... [more]
ARGB_HYPNA1.081e-3444.00Acetylglutamate kinase OS=Hyphomonas neptunium (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187752 ID=CN187752; Name=CN187752; organism=Citrus sinensis; type=EST; length=814bp
ATGGAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGG
CCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGTCACAG
CTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCCGTCTT
CAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCGCACCG
AAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCGTAACT
GACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAATCTCT
TCCCTTCATTCAGAAATTCCGCGGAAAGACCATCGTCGTCAAATACGGCG
GCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCGTCGTA
AAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCGTCCTGTCTTGGTCCA
CGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAATCGAGC
CCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGGAGATC
GTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCTCTCAT
CAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGGGCGCC
TCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCGTTGGT
GAAGTAGCCCGCGTGGACCCCACGGTCATTGAGCCTCTGGTAAACAGTGG
ACACATACCAGTGATTGCTTCTGTGGCTGCGGATGAGTTTGGGCAATCTT
ATAACATCAATGCG
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