CN187752

Overview
NameCN187752
Unique NameCN187752
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_PROM1 (Acetylglutamate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=argB PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.992e-42
Identity = 91/180 (50.56%), Postives = 117/180 (65.00%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV +LSE+LP+IQ+F  K IV+KYGG+AM      N                   V+VHGGGPEIN WL++ GI+PVF DGLR+TD  TM++V MVL GRVNK +VS IN  G  AVGL G+DG L  AR +      G VGEVA+V+  ++ PL+  G++PVI+SVA    G+S+NINA
Sbjct:   25 RVSVLSEALPYIQRFANKRIVIKYGGSAMADKTLQNAVFRDLALLSSVGVQI---VVVHGGGPEINQWLEKLGIKPVFLDGLRITDTETMDVVEMVLTGRVNKQIVSGINNHGRLAVGLCGIDGGLIEAR-TLGGGSHGLVGEVAKVNTKILSPLLEEGYVPVISSVANSSDGRSHNINA 200          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_CYACA (Acetylglutamate kinase OS=Cyanidium caldarium GN=argB PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.034e-41
Identity = 90/181 (49.72%), Postives = 113/181 (62.43%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSP-NSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            R  IL E+LP+IQ+FRG   V+KYGGAAMK                       + V VHGGGPEINFWL +  +E  F DG+R+TD  TM++V MVL G++NK LVSL+N  G   VGL G DG + TAR +   S  +G VGE+  VDP +I  L+   +IPVIASV ADE G++YNINA
Sbjct:    7 RTQILIEALPYIQQFRGAIFVIKYGGAAMKDLISKERLIADIVFLSCIGL---KLVCVHGGGPEINFWLNKMNVESKFHDGIRITDELTMQVVEMVLAGKINKELVSLLNNKGVKGVGLCGKDGTILTARKAQCGSIDMGLVGEIKSVDPYLILTLLKENYIPVIASVGADETGKTYNINA 184          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_PROMP (Acetylglutamate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=argB PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.532e-41
Identity = 88/180 (48.89%), Postives = 119/180 (66.11%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV ILSE+LP+IQ+F G+ IVVKYGG+ M+  +                     PV++HGGGPEIN WL +  I P F +GLRVTD  TMEIV MVL+GRVNK +V  INK G+ AVG+SG+DG L  +R   + +  G VGEV +++P +++PL+  G+IPVI+S+ +   G S+NINA
Sbjct:    7 RVSILSEALPYIQRFSGRKIVVKYGGSIMEDEKLKEAFFRDIALLSSVGVC---PVVIHGGGPEINRWLNKLEISPKFENGLRVTDEKTMEIVEMVLMGRVNKQIVRGINKTGSLAVGISGLDGNLIQSRELGDGSH-GLVGEVTQINPELLDPLIAKGYIPVISSIGSTADGISHNINA 182          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_THETN (Acetylglutamate kinase OS=Thermoanaerobacter tengcongensis GN=argB PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.731e-41
Identity = 87/180 (48.33%), Postives = 120/180 (66.67%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            +  IL E+LP+I+KF GKT+V+KYGG+AM      N                  PV+VHGGGPEI+ +LK+ GIE  F +GLRVTD  T EIV MVLVG++NK +VS+IN+ G  AVG+SG DG+L  A    ++  LG+VG++  V+  VIE L++ G+IPVIA V+  + G++YN+NA
Sbjct:   13 KAHILVEALPYIKKFSGKTVVIKYGGSAMLDC---NLKKMVMQDVVLMKFVGLNPVIVHGGGPEISSFLKKLGIESKFVNGLRVTDEKTAEIVEMVLVGKINKEIVSMINELGGMAVGISGKDGKLLKAEKDLSNGDLGYVGKIVEVNIEVIEMLIDRGYIPVIAPVSFGDDGKTYNVNA 189          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_PROM5 (Acetylglutamate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=argB PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.731e-41
Identity = 89/180 (49.44%), Postives = 117/180 (65.00%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV ILSE+LP+IQ F G+ IVVKYGG+ M+  +                     PV++HGGGPEIN WL +  I P F  GLRVTD  TMEIV MVL+GRVNK +V  INK G+ AVG+SG+DG L  +R   + +  G VGEV +++P ++EPL+  G+IPVI+S+ +   G S+NINA
Sbjct:    6 RVSILSEALPYIQSFSGRKIVVKYGGSIMEDEKLKKAFFRDIALLSSVGVC---PVVIHGGGPEINRWLSKLEISPKFEKGLRVTDDKTMEIVEMVLMGRVNKQIVRGINKTGSLAVGISGLDGNLIQSRELGDGSH-GLVGEVTQINPELLEPLIAKGYIPVISSIGSTTDGISHNINA 181          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_GRATL (Acetylglutamate kinase OS=Gracilaria tenuistipitata var. liui GN=argB PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.938e-40
Identity = 88/180 (48.89%), Postives = 121/180 (67.22%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            RV ILS++LPF+Q+F G+T+VVKYGG+AMK     +                 + V+VHGGGP IN WLK+  I+P F +G+RVTD +TME+V MVLVG+VNK LV+L+N++   AVGLSG D  L  A       K  + G+V +V+  ++  L++SG+IPV+ASVA+D  GQ+YNINA
Sbjct:    7 RVQILSDALPFVQRFHGRTLVVKYGGSAMKNVYLKSKIIEDILFLSYIGI---KVVIVHGGGPMINHWLKQVNIQPKFFNGIRVTDKDTMELVEMVLVGKVNKDLVTLLNRSSNLAVGLSGKDANLVVASSFFPDQKDNYTGKVQQVNIEIVNLLLSSGYIPVVASVASDLNGQAYNINA 183          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_SYNWW (Acetylglutamate kinase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=argB PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.837e-40
Identity = 88/180 (48.89%), Postives = 116/180 (64.44%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            + +IL E+LP+I+ F G+ +V+KYGGAAM   +                     P++VHGGGPEIN  L R GI+  F +G RVTDA TMEIV MVL G+VNK +V+ I+ +G  AVG+SG DG L  A P+  S K+GFVGEV  V+P +IE ++ +G+IPVIA +   E  QSYNINA
Sbjct:    8 KAEILVEALPYIKDFYGRRVVIKYGGAAMTDCELKQKVMQDIVLMKFVGM---HPIVVHGGGPEINQMLSRLGIQSEFVNGFRVTDAATMEIVEMVLGGKVNKEIVAGIHASGGKAVGISGKDGMLIQAHPADGSGKMGFVGEVQYVNPELIEKVIENGYIPVIAPIGIGEDQQSYNINA 184          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_THEP3 (Acetylglutamate kinase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=argB PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.458e-39
Identity = 84/180 (46.67%), Postives = 116/180 (64.44%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            +  +L E+LP+I+KF GKT+V+KYGG+AM      N                  P++VHGGGPEIN  L+R GIE  F +GLRVTD  TMEIV MVL GR+NK +VSLIN+ G  A+G+SG DGRL  A    ++  +G+VG++  V+  VI  ++  G+IPVIA  +  + G++YN+NA
Sbjct:   13 KAQVLIEALPYIKKFSGKTVVIKYGGSAMLDC---NLKRMVMQDIVLMKFVGLNPIVVHGGGPEINKMLERLGIESKFVNGLRVTDEATMEIVEMVLTGRINKEIVSLINELGGQAIGVSGKDGRLLKAEKDTSNGDIGYVGKIVDVNIDVITMMLEKGYIPVIAPTSFGDDGKTYNVNA 189          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_PELTS (Acetylglutamate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=argB PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.904e-39
Identity = 94/195 (48.21%), Postives = 118/195 (60.51%), Query Frame = 2
Query:  260 TPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLF----------TARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            TP E +  +L E+LP+I+KF GKTIV+KYGG AM     D+                  PV+VHGGGPEI   LKR G +  F  GLRVTD  TMEIV MVLVG++NK +VS IN+ G  AVGLSG D  LF          T      +A +GFVGE++RV+P ++  ++  G+IPVIA VA    G+SYNINA
Sbjct:    3 TPWE-KAAVLVEALPYIKKFYGKTIVIKYGGHAMLD---DSLKEAVLTDAVLMKYVGMHPVIVHGGGPEITEMLKRVGKDSRFVGGLRVTDGETMEIVEMVLVGKINKGIVSRINRIGGLAVGLSGKDAGLFQAVKKYRKVRTPEGREETADIGFVGEISRVNPQIVSTVIAEGYIPVIAPVAVGPEGESYNINA 193          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_THENN (Acetylglutamate kinase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=argB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.487e-39
Identity = 84/179 (46.93%), Postives = 114/179 (63.69%), Query Frame = 2
Query:  278 VDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            V++L E+LP+I++F GKT V+K+GG+AMK   ++                  +PV+VHGGGP I+  +K  GIEPVF++G RVTD  TMEIV MVLVG++NK +V  IN  G  AVG+ G D +L  A        LGFVG+V +V+P ++  L+ + +IPVIA V   E G SYNINA
Sbjct:    6 VNVLLEALPYIKEFYGKTFVIKFGGSAMK---EEKAKKAFIQDIILLKYTGIKPVIVHGGGPAISQMMKELGIEPVFKNGHRVTDERTMEIVEMVLVGKINKEIVMNINLHGGRAVGICGKDSKLIVAEKETKYGDLGFVGKVKQVNPEILHALIENDYIPVIAPVGIGEDGHSYNINA 181          
The following BLAST results are available for this feature:
BLAST of CN187752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_PROM16.992e-4250.56Acetylglutamate kinase OS=Prochlorococcus marinus ... [more]
ARGB_CYACA2.034e-4149.72Acetylglutamate kinase OS=Cyanidium caldarium GN=a... [more]
ARGB_PROMP4.532e-4148.89Acetylglutamate kinase OS=Prochlorococcus marinus ... [more]
ARGB_THETN7.731e-4148.33Acetylglutamate kinase OS=Thermoanaerobacter tengc... [more]
ARGB_PROM57.731e-4149.44Acetylglutamate kinase OS=Prochlorococcus marinus ... [more]
ARGB_GRATL2.938e-4048.89Acetylglutamate kinase OS=Gracilaria tenuistipitat... [more]
ARGB_SYNWW3.837e-4048.89Acetylglutamate kinase OS=Syntrophomonas wolfei su... [more]
ARGB_THEP31.458e-3946.67Acetylglutamate kinase OS=Thermoanaerobacter pseud... [more]
ARGB_PELTS1.904e-3948.21Acetylglutamate kinase OS=Pelotomaculum thermoprop... [more]
ARGB_THENN2.487e-3946.93Acetylglutamate kinase OS=Thermotoga neapolitana (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187752 ID=CN187752; Name=CN187752; organism=Citrus sinensis; type=EST; length=814bp
ATGGAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGG
CCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGTCACAG
CTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCCGTCTT
CAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCGCACCG
AAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCGTAACT
GACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAATCTCT
TCCCTTCATTCAGAAATTCCGCGGAAAGACCATCGTCGTCAAATACGGCG
GCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCGTCGTA
AAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCGTCCTGTCTTGGTCCA
CGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAATCGAGC
CCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGGAGATC
GTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCTCTCAT
CAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGGGCGCC
TCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCGTTGGT
GAAGTAGCCCGCGTGGACCCCACGGTCATTGAGCCTCTGGTAAACAGTGG
ACACATACCAGTGATTGCTTCTGTGGCTGCGGATGAGTTTGGGCAATCTT
ATAACATCAATGCG
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