CN187752

Overview
NameCN187752
Unique NameCN187752
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_ERYLH (Acetylglutamate kinase OS=Erythrobacter litoralis (strain HTCC2594) GN=argB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.716e-35
Identity = 84/201 (41.79%), Postives = 113/201 (56.22%), Query Frame = 2
Query:  245 VTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAK-----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            +T T+     + ++L E+LP+ Q++ G+T VVKYGG AM   +                     PV+VHGGGP+I   LKR G+E  F DGLRVTD  T E+  MVL G +NK LV  I +AG  A+G+SG DG L TA     + +           LGFVGE   VD T+++  V++G IPV+A + A E G +YNINA
Sbjct:    1 MTATEKTELAKAEVLIEALPYFQRYAGRTFVVKYGGHAMGDPKAAREFAEDIVLLKAVGI---NPVVVHGGGPQIGAMLKRLGVESTFVDGLRVTDKATAEVAEMVLSGAINKELVGWIAQAGGKAMGVSGKDGSLVTATKLERTTRDPESQIEQILDLGFVGEPTHVDTTILDTAVSAGMIPVVAPIGAGEDGHTYNINA 198          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_NOVAD (Acetylglutamate kinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=argB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.854e-35
Identity = 85/196 (43.37%), Postives = 109/196 (55.61%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP----------------SPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            + + L+E+LP++Q++ GKT VVKYGG AM   +                     PV+VHGGGP+I   LK  GIE  F DGLRVTD  T E+  MVL G +NK LVS I +AG  A+G+SG DG +  AR                  P    LGFVGE  R+D TVI+ +  +G IPVIA +   E G++YNINA
Sbjct:   12 KAETLTEALPYLQRYAGKTFVVKYGGHAMGDPE---LAQDFAEDIVLLKAVGINPVVVHGGGPQIGRMLKALGIESRFVDGLRVTDKQTAEVAEMVLAGAINKELVSWIARAGGKAIGISGKDGGMVIARKVEAKKAPKAVADAESGDPIVVDLGFVGEPDRIDTTVIDTICKAGMIPVIAPIGVGEDGETYNINA 204          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_NOCSJ (Acetylglutamate kinase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=argB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.854e-35
Identity = 84/193 (43.52%), Postives = 111/193 (57.51%), Query Frame = 2
Query:  251 DTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPS-----PNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            D   P   +   L+ +LP+++++ GK +VVKYGG AM     +                  +PV+VHGGGP+I+  L R GI   FR GLRVT    M++V MVLVG+V + LV LIN+ G  AVG SG D  LFTA P+          LG VGEVARV P  +  L+ +G IPV++SVA D  GQ +N+NA
Sbjct:    9 DPSKPDPAKARTLAAALPWLKRYHGKIVVVKYGGNAMTD---ETLKRAFAEDIAFLRFAGFKPVVVHGGGPQISTMLDRLGIRSEFRGGLRVTTPEAMDVVRMVLVGQVQRELVGLINEHGPLAVGCSGEDAGLFTAEPANTVIDGEEVDLGLVGEVARVRPESVLDLIEAGRIPVVSSVAPDADGQVHNVNA 198          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_MARAV (Acetylglutamate kinase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=argB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.854e-35
Identity = 85/188 (45.21%), Postives = 109/188 (57.98%), Query Frame = 2
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            +LS  LP+IQ+F GKT+V+KYGG AM   + ++                  P++VHGGGP+I   L+R  I+  F +G+RVTDA TM++V MVL G+VNK +VSLIN  G TAVGL+G D  L  AR             P    +G VGEVA V+  VI+ L  S  IPVIA +     G SYNINA
Sbjct:    6 VLSRGLPYIQRFTGKTVVIKYGGNAM---ENEDLKSSFARDVVLMKLVGINPIVVHGGGPQIGELLERLNIQSRFVNGMRVTDAETMDVVEMVLGGQVNKEIVSLINAHGGTAVGLTGKDANLIRARKLEVVNRSPELERPEIIDIGHVGEVASVNVDVIDMLTRSNVIPVIAPIGVGPDGASYNINA 190          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_BORPD (Acetylglutamate kinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=argB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.854e-35
Identity = 85/203 (41.87%), Postives = 119/203 (58.62%), Query Frame = 2
Query:  245 VTDTQTPAE-----FRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAK--------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            +TDT  PA       +  +LSE+LP+I++F GKTIVVKYGG AM    ++                   PV+VHGGGP+I+  L+R G +  F  G+RVTDA TME+V  VL G+V + +V +IN+ G  AVGL+G DG L  AR    + K        +GFVG++ +V+P V++ L +   IPVI+ +   E G +YNINA
Sbjct:    1 MTDTPDPAAVSSPAIKAAVLSEALPYIRRFHGKTIVVKYGGNAMT---EERLQRSFAHDVVLLKLVGLNPVVVHGGGPQIDDALRRIGKQGTFVQGMRVTDAETMEVVEWVLGGQVQQDIVMMINEVGGKAVGLTGKDGMLIQARKKLMANKENPQEPIDIGFVGDITQVEPAVVKALQDDQFIPVISPIGYGEDGTAYNINA 200          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_RHILW (Acetylglutamate kinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=argB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35
Identity = 84/197 (42.64%), Postives = 112/197 (56.85%), Query Frame = 2
Query:  257 QTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAK-----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            ++ +E +  +L+++LPF+Q++  KTIVVKYGG AM                         P++VHGGGP+I   L + GIE  F  GLRVTD  T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A  +  + K           LGFVGEV  VD T+++ L  S  IPVIA VA    G +YNINA
Sbjct:    3 ESESELQARLLAKALPFMQRYENKTIVVKYGGHAMG---NPELGKAFASDIALLKQSGVNPIVVHGGGPQIGAMLNKMGIESKFEGGLRVTDQKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKARKTVKDPDSNIERVLDLGFVGEVVEVDRTLLDLLARSEMIPVIAPVAPGRDGATYNINA 196          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_RHIE6 (Acetylglutamate kinase OS=Rhizobium etli (strain CIAT 652) GN=argB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35
Identity = 84/197 (42.64%), Postives = 112/197 (56.85%), Query Frame = 2
Query:  257 QTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAK-----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            ++ +E +  +L+++LPF+Q++  KTIVVKYGG AM                         P++VHGGGP+I   L + GIE  F  GLRVTD  T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A  +  + K           LGFVGEV  VD T+++ L  S  IPVIA VA    G +YNINA
Sbjct:    3 ESESEIQARLLAQALPFMQRYENKTIVVKYGGHAMG---NPELGKAFASDIALLKQSGVNPIVVHGGGPQIGAMLNKMGIESKFEGGLRVTDQKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKARKTIKDPDSNIERVLDLGFVGEVVEVDRTLLDLLARSEMIPVIAPVAPGRDGATYNINA 196          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_PSEPK (Acetylglutamate kinase OS=Pseudomonas putida (strain KT2440) GN=argB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35
Identity = 82/189 (43.39%), Postives = 112/189 (59.26%), Query Frame = 2
Query:  281 DILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            ++LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTD+ TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  AR            +P    +G VGEV  V+  ++  LV    IPVIA +     G+SYNINA
Sbjct:   13 EVLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDSATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRARKLTVSRQTPEMTTPEIIDIGHVGEVVSVNTDLLNMLVKGDFIPVIAPIGVGANGESYNINA 198          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_PSEPG (Acetylglutamate kinase OS=Pseudomonas putida (strain GB-1) GN=argB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35
Identity = 82/189 (43.39%), Postives = 112/189 (59.26%), Query Frame = 2
Query:  281 DILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            ++LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTD+ TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  AR            +P    +G VGEV  V+  ++  LV    IPVIA +     G+SYNINA
Sbjct:   13 EVLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDSATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRARKLTVSRQTPEMTTPEIIDIGHVGEVVSVNTDLLNMLVKGDFIPVIAPIGVGANGESYNINA 198          
BLAST of CN187752 vs. ExPASy Swiss-Prot
Match: ARGB_PSEPF (Acetylglutamate kinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=argB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35
Identity = 82/188 (43.62%), Postives = 112/188 (59.57%), Query Frame = 2
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINA 814
            +LSE+LP+I+++ GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNKS+V+LIN+ G +A+GL+G D  L  A+             P    +G VGEV  ++  ++  LV    IPVIA +   E G+SYNINA
Sbjct:   14 VLSEALPYIRRYVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFVDGMRVTDAATMDVVEMVLGGQVNKSIVNLINRHGGSAIGLTGKDAGLIRAKKLTVTRQTPEMTQPEIIDIGHVGEVVGINTELLNLLVKGNFIPVIAPIGVGENGESYNINA 198          
The following BLAST results are available for this feature:
BLAST of CN187752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_ERYLH3.716e-3541.79Acetylglutamate kinase OS=Erythrobacter litoralis ... [more]
ARGB_NOVAD4.854e-3543.37Acetylglutamate kinase OS=Novosphingobium aromatic... [more]
ARGB_NOCSJ4.854e-3543.52Acetylglutamate kinase OS=Nocardioides sp. (strain... [more]
ARGB_MARAV4.854e-3545.21Acetylglutamate kinase OS=Marinobacter aquaeolei (... [more]
ARGB_BORPD4.854e-3541.87Acetylglutamate kinase OS=Bordetella petrii (strai... [more]
ARGB_RHILW6.339e-3542.64Acetylglutamate kinase OS=Rhizobium leguminosarum ... [more]
ARGB_RHIE66.339e-3542.64Acetylglutamate kinase OS=Rhizobium etli (strain C... [more]
ARGB_PSEPK6.339e-3543.39Acetylglutamate kinase OS=Pseudomonas putida (stra... [more]
ARGB_PSEPG6.339e-3543.39Acetylglutamate kinase OS=Pseudomonas putida (stra... [more]
ARGB_PSEPF6.339e-3543.62Acetylglutamate kinase OS=Pseudomonas fluorescens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187752 ID=CN187752; Name=CN187752; organism=Citrus sinensis; type=EST; length=814bp
ATGGAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGG
CCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGTCACAG
CTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCCGTCTT
CAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCGCACCG
AAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCGTAACT
GACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAATCTCT
TCCCTTCATTCAGAAATTCCGCGGAAAGACCATCGTCGTCAAATACGGCG
GCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCGTCGTA
AAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCGTCCTGTCTTGGTCCA
CGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAATCGAGC
CCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGGAGATC
GTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCTCTCAT
CAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGGGCGCC
TCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCGTTGGT
GAAGTAGCCCGCGTGGACCCCACGGTCATTGAGCCTCTGGTAAACAGTGG
ACACATACCAGTGATTGCTTCTGTGGCTGCGGATGAGTTTGGGCAATCTT
ATAACATCAATGCG
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