CK938529

Overview
NameCK938529
Unique NameCK938529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2063 contig Csv1_Contig2063:103..741. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSKP_CAPAN (Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 2.944e-73
Identity = 131/165 (79.39%), Postives = 154/165 (93.33%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IA+DVT+LIG TP+VYLN IV GCVA IAAKLE+MEPC SVKDRIG+SMI+DAEEKGLI PG++VL+EPTSGNTGIGLAF+AA++GY+LI+TMPASMSLERR++L AFGAELVLTDPA+GMKGAV KAEEI + TP++Y+LQQF+NPANPKIHYETTGPEIW+ T
Sbjct:   67 IAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMISDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKGMKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDT 231          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSKP_SOLTU (Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.119e-72
Identity = 130/165 (78.79%), Postives = 152/165 (92.12%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IA+DVT+LIG TP+VYLN I  GCVA IAAKLE+MEPC SVKDRIG+SMI DAEEKGLI PG++VL+EPTSGNTGIGLAF+AA++GY+LI+TMPASMSLERR++L AFGAELVLTDPA+GMKGAV KAEEI + TP++Y+LQQF+NPANPKIHYETTGPEIW+ T
Sbjct:   69 IAEDVTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCSVKDRIGFSMIVDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKGMKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDT 233          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSKP_ARATH (Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 5.552e-72
Identity = 130/165 (78.79%), Postives = 150/165 (90.91%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IA +  +LIGKTP+VYLN +V GCVA +AAKLE+MEPC SVKDRIGYSMI DAEEKGLI PG+SVL+E TSGNTGIGLAF+AA+KGY+LI+TMPASMSLERR++L AFGAELVLT+PA+GM GA+QKAEEI  KTPNSY+LQQF+NPANPKIHYETTGPEIW+ T
Sbjct:   75 IADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLTEPAKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDT 239          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSKM_ARATH (Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3)

HSP 1 Score: 266.929 bits (681), Expect = 6.139e-71
Identity = 128/165 (77.58%), Postives = 149/165 (90.30%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IA +V++LIGKTP+VYLN I  GCVA IAAKLE+MEPC SVKDRIGYSM+ DAE+KG I PG+SVL+EPTSGNTGIGLAF+AA++GYRLI+TMPASMS+ERR++L AFGAELVLTDPA+GM GAVQKAEEI   TP++Y+LQQF+NPANPKIHYETTGPEIW  T
Sbjct:  113 IADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDT 277          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSKP_SPIOL (Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2)

HSP 1 Score: 264.618 bits (675), Expect = 3.047e-70
Identity = 126/165 (76.36%), Postives = 150/165 (90.91%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IA+DV++LIGKTP+VYLN +  G VA IAAKLE MEPC SVKDRIGYSMI DAE+KG+I PG++ L+EPTSGNTGIGLAF+AAA+GY++ +TMPASMS+ERR++L AFGAELVLTDPA+GMKGAV+KAEEI  KTP+SY+LQQF+NPANPKIHYETTGPEIW+ T
Sbjct:   67 IAEDVSQLIGKTPMVYLNNVSKGSVANIAAKLESMEPCCSVKDRIGYSMIDDAEQKGVITPGKTTLVEPTSGNTGIGLAFIAAARGYKITLTMPASMSMERRVILKAFGAELVLTDPAKGMKGAVEKAEEILKKTPDSYMLQQFDNPANPKIHYETTGPEIWEDT 231          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK4_ARATH (Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.054e-62
Identity = 113/165 (68.48%), Postives = 142/165 (86.06%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IA+DVT+LIG TP+VYLNR+ DGC+A IAAKLE MEPC SVKDRIG SMI +AE  G I P ++VL+EPT+GNTG+G+AF+AAAKGY+LI+TMPAS+++ERRM+L A GAE+VLT+P +G+KGAV KA+EI  KT N+Y+ QQF+N AN KIH+ETTGPEIW+ T
Sbjct:   99 IAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGAITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTNPEKGLKGAVDKAKEIVLKTKNAYMFQQFDNTANTKIHFETTGPEIWEDT 263          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_SYNY3 (Cysteine synthase OS=Synechocystis sp. (strain PCC 6803) GN=cysK PE=3 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 2.865e-52
Identity = 101/167 (60.48%), Postives = 134/167 (80.24%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRI--VDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IA ++TELIG+TPLV LNRI  ++GC A+I  KLE M P +SVKDRIG +MI  AE++GLI PG+++LIEPTSGNTGI LA +AAAKGY+LI+TMP +MS ERR +L A+GA+L LT  + GM G +++A+E+ +  PN+Y+LQQF+NPANP+IH +TT  EIW+ T
Sbjct:    3 IASNITELIGRTPLVRLNRIPLLEGCGAKIVVKLEGMNPAASVKDRIGINMINRAEQEGLIEPGKTLLIEPTSGNTGIALAMVAAAKGYQLILTMPETMSQERRAMLKAYGAKLELTPGSEGMGGCIRRAQELAESLPNAYMLQQFDNPANPQIHQQTTALEIWQDT 169          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_MYCTU (Cysteine synthase A OS=Mycobacterium tuberculosis GN=cysK PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.974e-50
Identity = 97/165 (58.79%), Postives = 125/165 (75.76%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IA+D+T+LIG+TPLV L R+ DG VA I AKLE   P +SVKDRIG +M+  AE+ GLI+P +++++EPTSGNTGI LA + AA+GYR ++TMP +MSLERRM+L A+GAEL+LT  A GM GA+ KAEE+       +V QQFENPANP IH  TT  E+W+ T
Sbjct:    3 IAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDT 166          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_MYCBO (Cysteine synthase A OS=Mycobacterium bovis GN=cysK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.974e-50
Identity = 97/165 (58.79%), Postives = 125/165 (75.76%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IA+D+T+LIG+TPLV L R+ DG VA I AKLE   P +SVKDRIG +M+  AE+ GLI+P +++++EPTSGNTGI LA + AA+GYR ++TMP +MSLERRM+L A+GAEL+LT  A GM GA+ KAEE+       +V QQFENPANP IH  TT  E+W+ T
Sbjct:    3 IAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDT 166          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_MYCLE (Cysteine synthase A OS=Mycobacterium leprae GN=cysK PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.127e-48
Identity = 94/165 (56.97%), Postives = 123/165 (74.55%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IA+DVT+L+G TPLV L R+ +G +A + AKLE   P +SVKDRIG +MI  AEE GLI+P ++V++EPTSGNTGI LA + AA+GY  ++TMP +MS+ERRM+L A+GAEL+LT  A GM GA+ KAEE+       ++ QQFENPANP IH  TT  E+W+ T
Sbjct:    3 IAEDVTQLVGNTPLVRLRRVTEGALADVVAKLESFNPANSVKDRIGVAMIDTAEEAGLIKP-DTVILEPTSGNTGIALAMVCAARGYHCVLTMPETMSIERRMLLRAYGAELILTPGADGMSGAIAKAEELAKSDKRYFIPQQFENPANPAIHAATTAEEVWRDT 166          
The following BLAST results are available for this feature:
BLAST of CK938529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSKP_CAPAN2.944e-7379.39Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_SOLTU1.119e-7278.79Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_ARATH5.552e-7278.79Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKM_ARATH6.139e-7177.58Cysteine synthase, mitochondrial OS=Arabidopsis th... [more]
CYSKP_SPIOL3.047e-7076.36Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSK4_ARATH3.054e-6268.48Probable cysteine synthase, chloroplastic OS=Arabi... [more]
CYSK_SYNY32.865e-5260.48Cysteine synthase OS=Synechocystis sp. (strain PCC... [more]
CYSK_MYCTU5.974e-5058.79Cysteine synthase A OS=Mycobacterium tuberculosis ... [more]
CYSK_MYCBO5.974e-5058.79Cysteine synthase A OS=Mycobacterium bovis GN=cysK... [more]
CYSK_MYCLE1.127e-4856.97Cysteine synthase A OS=Mycobacterium leprae GN=cys... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004441_F08 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938529 ID=CK938529; Name=CK938529; organism=Citrus sinensis; type=EST; length=639bp
GGGGGACAGNNNNTTTATTTGTTTTTCAATTTTCTACTGTTTTCCAGCTG
CCTTGACATTGTTTACGATTCTTCCCAGAGAAAGCTTTCACGTTCGCTTG
TAACTTGAAAAAAAGAAAAAAAAATGGTGGAGGAGAAGTCCGTGATTGCG
AAAGATGTCACTGAATTGATTGGTAAAACACCATTGGTGTATCTCAACCG
CATTGTGGATGGTTGCGTTGCTAGAATTGCTGCCAAGCTGGAGATGATGG
AACCCTGCTCTAGCGTCAAAGATAGAATTGGATACAGTATGATCGCTGAT
GCAGAGGAGAAGGGTCTCATTAGACCAGGCGAGAGTGTCCTGATTGAGCC
TACCAGCGGTAATACTGGCATAGGGTTGGCATTCATGGCAGCTGCTAAGG
GTTACAGACTTATAATTACCATGCCTGCTTCAATGAGTCTTGAAAGAAGA
ATGGTTCTCCTAGCTTTTGGAGCTGAGCTTGTGCTCACTGATCCTGCCAG
GGGCATGAAGGGAGCTGTTCAGAAGGCAGAAGAGATAAGGGACAAGACAC
CGAATTCCTATGTCCTTCAGCAGTTTGAAAACCCAGCAAACCCAAAGATC
CACTACGAGACTACCGGACCAGAGATCTGGAAAGGCACC
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