CK938529

Overview
NameCK938529
Unique NameCK938529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2063 contig Csv1_Contig2063:103..741. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: SRPG_SYNE7 (Cysteine synthase, plasmid OS=Synechococcus elongatus (strain PCC 7942) GN=srpG PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.125e-47
Identity = 100/163 (61.35%), Postives = 124/163 (76.07%), Query Frame = 1
Query:  154 DVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYV-LQQFENPANPKIHYETTGPEIWKGT 639
            D ++ IGKTPLV LNRIV G  A + AK+E   P  SVK RIG +MI DAE++GL+ PG+  LIEPTSGNTGI LAF+AAA+G  L +TMP +MSLERR +L A+GA+LVLT+  +GM GAV++AE+I    P+ YV LQQF NPANP IH +TTGPEIW+ T
Sbjct:   10 DNSQTIGKTPLVRLNRIVKGAPATVLAKIEGRNPAYSVKCRIGAAMIWDAEQRGLLGPGKE-LIEPTSGNTGIALAFVAAARGIPLTLTMPETMSLERRKLLAAYGAKLVLTEGVKGMTGAVRRAEDIAASDPDRYVLLQQFRNPANPAIHEQTTGPEIWEDT 171          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_ECOLI (Cysteine synthase A OS=Escherichia coli (strain K12) GN=cysK PE=1 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.054e-46
Identity = 101/168 (60.12%), Postives = 127/168 (75.60%), Query Frame = 1
Query:  139 SVIAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSY-VLQQFENPANPKIHYETTGPEIWKGT 639
            S I +D +  IG TPLV LNRI +G   RI AK+E   P  SVK RIG +MI DAE++G+++PG   L+EPTSGNTGI LA++AAA+GY+L +TMP +MS+ERR +L A GA LVLT+ A+GMKGA+QKAEEI    P  Y +LQQF NPANP+IH +TTGPEIW+ T
Sbjct:    2 SKIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVE-LVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDT 165          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_ECO57 (Cysteine synthase A OS=Escherichia coli O157:H7 GN=cysK PE=3 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.054e-46
Identity = 101/168 (60.12%), Postives = 127/168 (75.60%), Query Frame = 1
Query:  139 SVIAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSY-VLQQFENPANPKIHYETTGPEIWKGT 639
            S I +D +  IG TPLV LNRI +G   RI AK+E   P  SVK RIG +MI DAE++G+++PG   L+EPTSGNTGI LA++AAA+GY+L +TMP +MS+ERR +L A GA LVLT+ A+GMKGA+QKAEEI    P  Y +LQQF NPANP+IH +TTGPEIW+ T
Sbjct:    2 SKIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVE-LVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDT 165          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_SALTY (Cysteine synthase A OS=Salmonella typhimurium GN=cysK PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.377e-46
Identity = 101/168 (60.12%), Postives = 127/168 (75.60%), Query Frame = 1
Query:  139 SVIAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSY-VLQQFENPANPKIHYETTGPEIWKGT 639
            S I +D +  IG TPLV LNRI +G   RI AK+E   P  SVK RIG +MI DAE++G+++PG   L+EPTSGNTGI LA++AAA+GY+L +TMP +MS+ERR +L A GA LVLT+ A+GMKGA+QKAEEI    P  Y +LQQF NPANP+IH +TTGPEIW+ T
Sbjct:    2 SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVE-LVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDT 165          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_SALTI (Cysteine synthase A OS=Salmonella typhi GN=cysK PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.377e-46
Identity = 101/168 (60.12%), Postives = 127/168 (75.60%), Query Frame = 1
Query:  139 SVIAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSY-VLQQFENPANPKIHYETTGPEIWKGT 639
            S I +D +  IG TPLV LNRI +G   RI AK+E   P  SVK RIG +MI DAE++G+++PG   L+EPTSGNTGI LA++AAA+GY+L +TMP +MS+ERR +L A GA LVLT+ A+GMKGA+QKAEEI    P  Y +LQQF NPANP+IH +TTGPEIW+ T
Sbjct:    2 SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVE-LVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDT 165          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_NEIMB (Cysteine synthase OS=Neisseria meningitidis serogroup B GN=cysK PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.683e-44
Identity = 92/166 (55.42%), Postives = 120/166 (72.29%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVL-QQFENPANPKIHYETTGPEIWKGT 639
            IA  +TELIG TPLV LNR+ +G  A +A KLE   P SSVKDRI  +MI  AE+ G I    +V++E TSGNTG+GLA + AA+GY+L ITMP SMS ER+M+L AFGAEL+LT  A GM GA+ KA+ + D  P++Y + +QF+N ANP++H +TT  EIW+ T
Sbjct:    3 IANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVKDRIAEAMIEGAEKAGKINKN-TVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKERKMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTAEEIWRDT 167          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_BACSU (Cysteine synthase OS=Bacillus subtilis GN=cysK PE=1 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 4.898e-44
Identity = 94/161 (58.39%), Postives = 121/161 (75.16%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEI 627
            +A  +TELIG TP+V LNR+ D   A +  KLE M P SSVKDRIG +MI  AE++G ++ G ++ IEPTSGNTGIGLA +AAAKG + I+ MP +MS+ERR +L A+GAELVLT  A GMKGA++KAEE+ +K    +V QQF NP+NP+IH +TTG EI
Sbjct:    4 VANSITELIGNTPIVKLNRLADENSADVYLKLEYMNPGSSVKDRIGLAMIEAAEKEGKLKAGNTI-IEPTSGNTGIGLAMVAAAKGLKAILVMPDTMSMERRNLLRAYGAELVLTPGAEGMKGAIKKAEELAEK-HGYFVPQQFNNPSNPEIHRQTTGKEI 162          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_STRP6 (Cysteine synthase OS=Streptococcus pyogenes serotype M6 GN=cysK PE=1 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 5.416e-43
Identity = 92/161 (57.14%), Postives = 117/161 (72.67%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEI 627
            I K +TEL+G+TP++ LNR++    A +  KLE   P SSVKDRI  SMI  AE +GLI PG+ V+IEPTSGNTGIGLA++ AAKGYR+II MP +MSLERR ++ A+GAELVLT  A GMKGA+ K E +  +   +++  QF NPANP IH +TT  EI
Sbjct:    4 IYKTITELVGQTPIIKLNRLIPNEAADVYVKLEAFNPGSSVKDRIALSMIEAAEAEGLISPGD-VIIEPTSGNTGIGLAWVGAAKGYRVIIVMPETMSLERRQIIQAYGAELVLTPGAEGMKGAIAKTETLAIEL-GAWMPMQFNNPANPSIHEKTTAQEI 162          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_STAES (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysK PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.820e-42
Identity = 88/157 (56.05%), Postives = 116/157 (73.89%), Query Frame = 1
Query:  157 VTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEI 627
            VT++IG TP+V L  +VD   A I  KLE   P  SVKDRI  +MI  AE +G I+PG+++ +EPTSGNTGIGLAF+ AAKGY+ + TMP +MS ERR +L A+GAELVLT  +  MKGA++KA+E++++    +  QQFENPANP+IH  TTGPE+
Sbjct:    9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEE-HGYFEPQQFENPANPEIHELTTGPEL 163          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_STAEQ (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cysK PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.820e-42
Identity = 88/157 (56.05%), Postives = 116/157 (73.89%), Query Frame = 1
Query:  157 VTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEI 627
            VT++IG TP+V L  +VD   A I  KLE   P  SVKDRI  +MI  AE +G I+PG+++ +EPTSGNTGIGLAF+ AAKGY+ + TMP +MS ERR +L A+GAELVLT  +  MKGA++KA+E++++    +  QQFENPANP+IH  TTGPE+
Sbjct:    9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEE-HGYFEPQQFENPANPEIHELTTGPEL 163          
The following BLAST results are available for this feature:
BLAST of CK938529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
SRPG_SYNE72.125e-4761.35Cysteine synthase, plasmid OS=Synechococcus elonga... [more]
CYSK_ECOLI1.054e-4660.12Cysteine synthase A OS=Escherichia coli (strain K1... [more]
CYSK_ECO571.054e-4660.12Cysteine synthase A OS=Escherichia coli O157:H7 GN... [more]
CYSK_SALTY1.377e-4660.12Cysteine synthase A OS=Salmonella typhimurium GN=c... [more]
CYSK_SALTI1.377e-4660.12Cysteine synthase A OS=Salmonella typhi GN=cysK PE... [more]
CYSK_NEIMB1.683e-4455.42Cysteine synthase OS=Neisseria meningitidis serogr... [more]
CYSK_BACSU4.898e-4458.39Cysteine synthase OS=Bacillus subtilis GN=cysK PE=... [more]
CYSK_STRP65.416e-4357.14Cysteine synthase OS=Streptococcus pyogenes seroty... [more]
CYSK_STAES7.820e-4256.05Cysteine synthase OS=Staphylococcus epidermidis (s... [more]
CYSK_STAEQ7.820e-4256.05Cysteine synthase OS=Staphylococcus epidermidis (s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004441_F08 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938529 ID=CK938529; Name=CK938529; organism=Citrus sinensis; type=EST; length=639bp
GGGGGACAGNNNNTTTATTTGTTTTTCAATTTTCTACTGTTTTCCAGCTG
CCTTGACATTGTTTACGATTCTTCCCAGAGAAAGCTTTCACGTTCGCTTG
TAACTTGAAAAAAAGAAAAAAAAATGGTGGAGGAGAAGTCCGTGATTGCG
AAAGATGTCACTGAATTGATTGGTAAAACACCATTGGTGTATCTCAACCG
CATTGTGGATGGTTGCGTTGCTAGAATTGCTGCCAAGCTGGAGATGATGG
AACCCTGCTCTAGCGTCAAAGATAGAATTGGATACAGTATGATCGCTGAT
GCAGAGGAGAAGGGTCTCATTAGACCAGGCGAGAGTGTCCTGATTGAGCC
TACCAGCGGTAATACTGGCATAGGGTTGGCATTCATGGCAGCTGCTAAGG
GTTACAGACTTATAATTACCATGCCTGCTTCAATGAGTCTTGAAAGAAGA
ATGGTTCTCCTAGCTTTTGGAGCTGAGCTTGTGCTCACTGATCCTGCCAG
GGGCATGAAGGGAGCTGTTCAGAAGGCAGAAGAGATAAGGGACAAGACAC
CGAATTCCTATGTCCTTCAGCAGTTTGAAAACCCAGCAAACCCAAAGATC
CACTACGAGACTACCGGACCAGAGATCTGGAAAGGCACC
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