CN187751
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA2_STYLE (Tubulin alpha-2 chain OS=Stylonychia lemnae PE=3 SV=1) HSP 1 Score: 333.569 bits (854), Expect = 1.847e-91 Identity = 162/210 (77.14%), Postives = 176/210 (83.81%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 VGN+ EL+CLEHGI PDG MPS+ TIG DAFNTFFSET G+HVPR VF+DL PTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLD +RKL+D CTGLQGFLVFN+V VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAV+LDNEA+YDICRR+LDIE +T Sbjct: 16 VGNACWELFCLEHGIQPDGQMPSNKTIGGGDDAFNTFFSETGTGKHVPRCVFLDLGPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDGIRKLADQCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYT 225 HSP 2 Score: 23.8682 bits (50), Expect = 1.847e-91 Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLI+Q+ Sbjct: 224 YTNLNRLIAQV 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBAD_PHYPO (Tubulin alpha-1A chain OS=Physarum polycephalum GN=ALTA PE=1 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 1.187e-90 Identity = 159/210 (75.71%), Postives = 177/210 (84.29%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 VGN+ ELYCLEHGI PDG MPSD ++G DAFNTFFSET AG+HVPRAVF+DLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDLCLDRVRKL+D CTGLQGFLVF++V VDYGKKSKL F +YPSPQVSTAVVEPYNSVLSTHSLLEHTDVA +LDNEAIYDIC+R+LDI+ +T Sbjct: 16 VGNACWELYCLEHGIQPDGQMPSDKSVGYGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLCLDRVRKLADQCTGLQGFLVFHSVGGGTGSGFGSLLLERLSVDYGKKSKLDFCVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAFMLDNEAIYDICKRALDIDRPTYT 225 HSP 2 Score: 23.483 bits (49), Expect = 1.187e-90 Identity = 8/11 (72.73%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRL++Q+ Sbjct: 224 YTNLNRLVAQV 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA_TOXGO (Tubulin alpha chain OS=Toxoplasma gondii PE=3 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 2.635e-90 Identity = 160/210 (76.19%), Postives = 175/210 (83.33%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 +GN+ EL+CLEHGI PDG MPSD TIG DAFNTFFSET AG+HVPR VF+DLEPTV+DEVRTG+YR LFHPEQLISGKEDAANNFARGHYT+GKEIVDL LDR+RKL+DNCTGLQGFL+FNAV VDYGKKSKL F +PSPQVSTAVVEPYNSVLSTHSLLEHTDVAV+LDNEAIYDICRR+LDIE +T Sbjct: 16 IGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCVFLDLEPTVVDEVRTGTYRHLFHPEQLISGKEDAANNFARGHYTIGKEIVDLSLDRIRKLADNCTGLQGFLMFNAVGGGTGSGLGCLLLERLSVDYGKKSKLNFCSWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 23.8682 bits (50), Expect = 2.635e-90 Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLI+Q+ Sbjct: 224 YTNLNRLIAQV 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA_NEOCA (Tubulin alpha chain OS=Neospora caninum GN=TUBA PE=2 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 2.635e-90 Identity = 160/210 (76.19%), Postives = 175/210 (83.33%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 +GN+ EL+CLEHGI PDG MPSD TIG DAFNTFFSET AG+HVPR VF+DLEPTV+DEVRTG+YR LFHPEQLISGKEDAANNFARGHYT+GKEIVDL LDR+RKL+DNCTGLQGFL+FNAV VDYGKKSKL F +PSPQVSTAVVEPYNSVLSTHSLLEHTDVAV+LDNEAIYDICRR+LDIE +T Sbjct: 16 IGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCVFLDLEPTVVDEVRTGTYRHLFHPEQLISGKEDAANNFARGHYTIGKEIVDLSLDRIRKLADNCTGLQGFLMFNAVGGGTGSGLGCLLLERLSVDYGKKSKLNFCSWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 23.8682 bits (50), Expect = 2.635e-90 Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLI+Q+ Sbjct: 224 YTNLNRLIAQV 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA_EUPVA (Tubulin alpha chain OS=Euplotes vannus PE=3 SV=1) HSP 1 Score: 328.946 bits (842), Expect = 4.485e-90 Identity = 159/210 (75.71%), Postives = 176/210 (83.81%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 VGN+ EL+CLEHGI PDG MPSD TIG DAFNTFFSET AG+HVPRAV VDLEPTV DE+RTG+YRQLFHPEQ+ISGKEDAANNFARGHYT+GKEIVDL LDR+RKL+DNCTGLQGF+ F++V VDYGKKSKL FT+YPSPQVSTAVVEPYNSVLSTHSLLEHTDVAV+LDNEA+YDICRR+LDIE +T Sbjct: 16 VGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVLVDLEPTVCDEIRTGTYRQLFHPEQIISGKEDAANNFARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFIGFHSVGGGTGSGLGSLLLERLSVDYGKKSKLCFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYT 225 HSP 2 Score: 23.8682 bits (50), Expect = 4.485e-90 Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLI+Q+ Sbjct: 224 YTNLNRLIAQV 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA_PLAFK (Tubulin alpha chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 2.883e-89 Identity = 156/210 (74.29%), Postives = 174/210 (82.86%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 VGN+ EL+CLEHGI PDG MPSD DAFNTFFSET AG+HVPR VFVDLEPTV+DEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKE++D+CLDR+RKL+DNCTGLQGFL+F+AV VDYGKKSKL F +PSPQVSTAVVEPYNSVLSTHSLLEHTDVA++LDNEAIYDICRR+LDIE +T Sbjct: 16 VGNACWELFCLEHGIQPDGQMPSDKASRANDDAFNTFFSETGAGKHVPRCVFVDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEVIDVCLDRIRKLADNCTGLQGFLMFSAVGGGTGSGFGCLMLERLSVDYGKKSKLNFCCWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAIMLDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 23.8682 bits (50), Expect = 2.883e-89 Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLI+Q+ Sbjct: 224 YTNLNRLIAQV 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBAE_PHYPO (Tubulin alpha-2B chain OS=Physarum polycephalum GN=ALTBE PE=2 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 9.248e-89 Identity = 155/209 (74.16%), Postives = 177/209 (84.69%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANF 628 VGN+ ELYCLEHGI PDG MPSD ++G DAFNTFFSETS+G+HVPRA+F+DLEPTVIDE+RTG+YRQLFHPEQLI+GKEDAANN+ARGHYTVGKE+VDLCLDRVRKL+D C+GLQGFLVF++V VDYGKKSKL F +YPSPQVSTAVVEPYNSVLSTH LLEHTDVA +LDNEAIYD+C+RSLDIE ++ Sbjct: 16 VGNACWELYCLEHGIKPDGQMPSDKSVGGGDDAFNTFFSETSSGKHVPRAIFLDLEPTVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELVDLCLDRVRKLADQCSGLQGFLVFHSVGGGTGSGFGSLLLERLSVDYGKKSKLDFCVYPSPQVSTAVVEPYNSVLSTHGLLEHTDVAFMLDNEAIYDLCKRSLDIERPSY 224
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBAN_PHYPO (Tubulin alpha-1B chain OS=Physarum polycephalum GN=ALTBN PE=2 SV=2) HSP 1 Score: 324.324 bits (830), Expect = 3.514e-88 Identity = 153/209 (73.21%), Postives = 178/209 (85.17%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANF 628 VGN+ ELYCLEHGI+PDG MPSD ++G DAFNTFFSETS+G+HVPRA+++DLEPTVIDE+RTG+YRQLFHPEQLI+GKEDAANN+ARGHYTVGKEIVDLCLDRVRKL+D C+GLQGFLVF++V VDYGKKSKL F +YPSPQVSTAVVEPYNSVLSTH LLEHTDVA +LDNEAIYD+C++SLDI+ ++ Sbjct: 16 VGNACWELYCLEHGINPDGQMPSDKSVGGGDDAFNTFFSETSSGKHVPRAIYLDLEPTVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLCLDRVRKLADQCSGLQGFLVFHSVGGGTGSGFGSLLLERLSVDYGKKSKLDFCVYPSPQVSTAVVEPYNSVLSTHGLLEHTDVAFMLDNEAIYDLCKKSLDIDRPSY 224
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA_PLAYO (Tubulin alpha chain OS=Plasmodium yoelii yoelii GN=PY01155 PE=2 SV=2) HSP 1 Score: 321.242 bits (822), Expect = 9.131e-88 Identity = 153/210 (72.86%), Postives = 173/210 (82.38%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 VGN+ EL+CLEHGI PDG MP D DAFNTFFSET AG+HVPR VFVDLEPTV+DEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKE++D+CLDR+RKL+DNCTGLQGFL+F+AV VDYGKKSKL F +PSPQVSTAVVEPYNSVLSTHSLLEHTDVA++LDNEAIYDIC+++LDIE +T Sbjct: 16 VGNACWELFCLEHGIQPDGQMPPDQAGRANDDAFNTFFSETGAGKHVPRCVFVDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEVIDVCLDRIRKLADNCTGLQGFLMFSAVGGGTGSGFGCLMLERLSVDYGKKSKLNFCCWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAIMLDNEAIYDICKKNLDIERPTYT 225 HSP 2 Score: 23.8682 bits (50), Expect = 9.131e-88 Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLI+Q+ Sbjct: 224 YTNLNRLIAQV 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA1C_BOVIN (Tubulin alpha-1C chain OS=Bos taurus GN=TUBA1C PE=1 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 2.027e-87 Identity = 153/210 (72.86%), Postives = 174/210 (82.86%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 +GN+ ELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANN+ARGHYT+GKEI+DL LDRVRKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIE +T Sbjct: 16 IGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 24.2534 bits (51), Expect = 2.027e-87 Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRL+SQI Sbjct: 224 YTNLNRLMSQI 234 The following BLAST results are available for this feature:
BLAST of CN187751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187751 ID=CN187751; Name=CN187751; organism=Citrus sinensis; type=EST; length=670bpback to top |