CN187751
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA_TORMA (Tubulin alpha chain OS=Torpedo marmorata PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.644e-87 Identity = 151/210 (71.90%), Postives = 174/210 (82.86%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 +GN+ ELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIE +T Sbjct: 16 IGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 25.409 bits (54), Expect = 2.644e-87 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLISQI Sbjct: 224 YTNLNRLISQI 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA1B_RAT (Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tuba1b PE=1 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.644e-87 Identity = 151/210 (71.90%), Postives = 174/210 (82.86%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 +GN+ ELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIE +T Sbjct: 16 IGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 25.409 bits (54), Expect = 2.644e-87 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLISQI Sbjct: 224 YTNLNRLISQI 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA1B_PIG (Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.644e-87 Identity = 151/210 (71.90%), Postives = 174/210 (82.86%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 +GN+ ELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIE +T Sbjct: 16 IGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 25.409 bits (54), Expect = 2.644e-87 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLISQI Sbjct: 224 YTNLNRLISQI 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA1B_PANTR (Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1B PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.644e-87 Identity = 151/210 (71.90%), Postives = 174/210 (82.86%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 +GN+ ELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIE +T Sbjct: 16 IGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 25.409 bits (54), Expect = 2.644e-87 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLISQI Sbjct: 224 YTNLNRLISQI 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA1B_MOUSE (Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b PE=1 SV=2) HSP 1 Score: 318.161 bits (814), Expect = 2.644e-87 Identity = 151/210 (71.90%), Postives = 174/210 (82.86%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 +GN+ ELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIE +T Sbjct: 16 IGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 25.409 bits (54), Expect = 2.644e-87 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLISQI Sbjct: 224 YTNLNRLISQI 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA1B_MERUN (Tubulin alpha-1B chain OS=Meriones unguiculatus GN=TUBA1B PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.644e-87 Identity = 151/210 (71.90%), Postives = 174/210 (82.86%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 +GN+ ELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIE +T Sbjct: 16 IGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 25.409 bits (54), Expect = 2.644e-87 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLISQI Sbjct: 224 YTNLNRLISQI 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA1B_MACFA (Tubulin alpha-1B chain OS=Macaca fascicularis GN=TUBA1B PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.644e-87 Identity = 151/210 (71.90%), Postives = 174/210 (82.86%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 +GN+ ELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIE +T Sbjct: 16 IGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 25.409 bits (54), Expect = 2.644e-87 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLISQI Sbjct: 224 YTNLNRLISQI 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA1B_HUMAN (Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B PE=1 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.644e-87 Identity = 151/210 (71.90%), Postives = 174/210 (82.86%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 +GN+ ELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIE +T Sbjct: 16 IGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 25.409 bits (54), Expect = 2.644e-87 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLISQI Sbjct: 224 YTNLNRLISQI 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA1B_CRIGR (Tubulin alpha-1B chain OS=Cricetulus griseus GN=TUBA1B PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.644e-87 Identity = 151/210 (71.90%), Postives = 174/210 (82.86%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 +GN+ ELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIE +T Sbjct: 16 IGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 25.409 bits (54), Expect = 2.644e-87 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLISQI Sbjct: 224 YTNLNRLISQI 234
BLAST of CN187751 vs. ExPASy Swiss-Prot
Match: TBA1B_BOVIN (Tubulin alpha-1B chain OS=Bos taurus PE=1 SV=2) HSP 1 Score: 318.161 bits (814), Expect = 2.644e-87 Identity = 151/210 (71.90%), Postives = 174/210 (82.86%), Query Frame = 2 Query: 2 VGNSPLELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIEEANFT 631 +GN+ ELYCLEHGI PDG MPSD TIG D+FNTFFSET AG+HVPRAVFVDLEPTVIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIE +T Sbjct: 16 IGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 225 HSP 2 Score: 25.409 bits (54), Expect = 2.644e-87 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 628 YTNLNRLISQI 660 YTNLNRLISQI Sbjct: 224 YTNLNRLISQI 234 The following BLAST results are available for this feature:
BLAST of CN187751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187751 ID=CN187751; Name=CN187751; organism=Citrus sinensis; type=EST; length=670bpback to top |