CN187750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB_ACRCO (Tubulin beta chain OS=Acremonium coenophialum GN=TUB2 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.207e-23 Identity = 49/139 (35.25%), Postives = 83/139 (59.71%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 SVPE+T +F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 285 SVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPP--------RDLKMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB2_WHEAT (Tubulin beta-2 chain OS=Triticum aestivum GN=TUBB2 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.207e-23 Identity = 48/139 (34.53%), Postives = 82/139 (58.99%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 +VPE+T +++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT + A + N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 285 TVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPT--------GLSMASTFVGNSTSIQEMFRRVSEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB_USTVI (Tubulin beta chain OS=Ustilago violacea PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 54/139 (38.85%), Postives = 83/139 (59.71%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 +V E+T +F+ +MMA DPRHG+Y+ +RG V K+V + +I+ K + FV+W P + V P G ++ +V I NNT++ E+F R+ FD+M+ +RAF+HWY GEGM+E EFSEA ++ Sbjct: 285 TVAELTAQMFDAKNMMAASDPRHGRYLTVAAYFRGKVSMKEVEDQMVSIQQKNSQYFVEWIPNN----VQSAHCEVAPRG----LKMSVTFIGNNTSIQELFKRVGDHFDVMFRRRAFLHWYTGEGMDEMEFSEASANM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB_NEUCR (Tubulin beta chain OS=Neurospora crassa GN=tub-2 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 50/139 (35.97%), Postives = 83/139 (59.71%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 SVPE+T +F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + + N+TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 285 SVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTAIQELFKRIGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB_METAN (Tubulin beta chain OS=Metarhizium anisopliae PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 49/139 (35.25%), Postives = 83/139 (59.71%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 SVPE+T +F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 285 SVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPP--------RGLKMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB_EPITY (Tubulin beta chain OS=Epichloe typhina GN=TUBB PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 49/139 (35.25%), Postives = 83/139 (59.71%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 SVPE+T +F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 285 SVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPP--------RGLKMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB_CEPAC (Tubulin beta chain OS=Cephalosporium acremonium GN=TUB2 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 49/139 (35.25%), Postives = 84/139 (60.43%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 SVPE+T +F+P +MMA D R+G+Y+ C ++RG V K+V + +++K + FV+W P + + PP ++ + I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 285 SVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQSKNSSYFVEWIPNNIQTALCAIPP--------RGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB3_CHICK (Tubulin beta-3 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 48/139 (34.53%), Postives = 83/139 (59.71%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 +VP++T +F+ +MMA C+P HG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP ++ + I N+TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 285 TVPDLTQQMFDAKNMMAACEPGHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB_CICAR (Tubulin beta chain OS=Cicer arietinum GN=TUBB PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.059e-23 Identity = 47/139 (33.81%), Postives = 82/139 (58.99%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 +VPE+T +++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP ++ + I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 287 TVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPP--------KNLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 417
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB_ASPPA (Tubulin beta chain OS=Aspergillus parasiticus GN=benR PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.059e-23 Identity = 50/139 (35.97%), Postives = 83/139 (59.71%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 SVPE+T +F+P +MMA D R+G+Y+ C ++RG V K+V + I++K FV+W P + + PP ++ + I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 285 SVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQTYFVEWIPNNIQTALCSIPP--------RGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415 The following BLAST results are available for this feature:
BLAST of CN187750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187750 ID=CN187750; Name=CN187750; organism=Citrus sinensis; type=EST; length=726bpback to top |