CN187750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBA1_NAEGR (Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=TBA1 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 1.896e-77 Identity = 136/144 (94.44%), Postives = 141/144 (97.92%), Query Frame = -1 Query: 295 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 726 SV EITN+ FEP+SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDW PTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN+TA+AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 287 SVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBA13_NAEGR (Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUBA13 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 1.896e-77 Identity = 136/144 (94.44%), Postives = 141/144 (97.92%), Query Frame = -1 Query: 295 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 726 SV EITN+ FEP+SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDW PTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN+TA+AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 287 SVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBA2_STYLE (Tubulin alpha-2 chain OS=Stylonychia lemnae PE=3 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.476e-77 Identity = 135/144 (93.75%), Postives = 140/144 (97.22%), Query Frame = -1 Query: 295 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 726 SV EITN+ FEP+SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINYQPPTVVP GDLAKV RAVCMISN+TA+AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 286 SVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPSGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 429
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBA1_CHLRE (Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii GN=TUBA1 PE=1 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.476e-77 Identity = 133/144 (92.36%), Postives = 140/144 (97.22%), Query Frame = -1 Query: 295 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 726 SV EITNA FEP+SMM KCDPRHGKYMACCLMYRGDVVPKDVNA+VATIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN+TA+ E+FSR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 287 SVAEITNAAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBAD_PHYPO (Tubulin alpha-1A chain OS=Physarum polycephalum GN=ALTA PE=1 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 4.224e-77 Identity = 133/144 (92.36%), Postives = 141/144 (97.92%), Query Frame = -1 Query: 295 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 726 +V EITN+VFEP++MMAKCDPRHGKYMACCLMYRGDVVPKDVNA+VA IKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM+SN TA+AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 287 TVAEITNSVFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNASVAVIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBA_PLAYO (Tubulin alpha chain OS=Plasmodium yoelii yoelii GN=PY01155 PE=2 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 2.096e-76 Identity = 133/144 (92.36%), Postives = 140/144 (97.22%), Query Frame = -1 Query: 295 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 726 SV EITN+ FEP++MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLAKV RAVCMISN+TA+AEVFSR+D KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 287 SVSEITNSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRMDQKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBA_PLAFK (Tubulin alpha chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.096e-76 Identity = 133/144 (92.36%), Postives = 140/144 (97.22%), Query Frame = -1 Query: 295 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 726 SV EITN+ FEP++MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLAKV RAVCMISN+TA+AEVFSR+D KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 287 SVSEITNSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRMDQKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBA_EUPOC (Tubulin alpha chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.096e-76 Identity = 134/144 (93.06%), Postives = 140/144 (97.22%), Query Frame = -1 Query: 295 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 726 SV EITN+ FEP+SMMAKCDPRHGKYMACC+MYRGDVVPKDVNAAVATIKTKRT+QFVDW PTGFKCGINYQPPTVVPGGDLAKV RAVCMISN+TA+AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 287 SVAEITNSSFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBA_TRYCR (Tubulin alpha chain OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 2.738e-76 Identity = 133/144 (92.36%), Postives = 141/144 (97.92%), Query Frame = -1 Query: 295 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 726 SV EI+NAVFEP+SMM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDW PTGFKCGINYQPPTVVPGGDLAKVQRAVCMI+N+TA+AEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 287 SVSEISNAVFEPASMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBA_TRYBR (Tubulin alpha chain OS=Trypanosoma brucei rhodesiense PE=3 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 2.738e-76 Identity = 133/144 (92.36%), Postives = 141/144 (97.92%), Query Frame = -1 Query: 295 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 726 SV EI+NAVFEP+SMM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDW PTGFKCGINYQPPTVVPGGDLAKVQRAVCMI+N+TA+AEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 287 SVSEISNAVFEPASMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430 The following BLAST results are available for this feature:
BLAST of CN187750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187750 ID=CN187750; Name=CN187750; organism=Citrus sinensis; type=EST; length=726bpback to top |