CN187750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB2_DAUCA (Tubulin beta-2 chain OS=Daucus carota GN=TUBB2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 47/139 (33.81%), Postives = 80/139 (57.55%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 +VPE+T +++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP + + I N+T++ E+F R+ +F M+ +AF+HWY GEGM+E EF+EA ++ Sbjct: 285 TVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMSSTFIGNSTSIQEMFRRVSEQFTAMFRPKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB1_TRIVE (Tubulin beta-1 chain OS=Trichoderma virens PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 48/139 (34.53%), Postives = 82/139 (58.99%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 SVPE+T + +P +MMA D R+G+Y+ C ++RG V K+V + +I+ K + FV+W P + + PP ++ + + N+TA+ E+F R+ +F M+ ++AF+HWY EGM+E EF+EA ++ Sbjct: 285 SVPELTQQMLDPKNMMAASDFRNGRYLTCSTIFRGKVAMKEVEDQMRSIQNKNSTYFVEWIPNNIQTALCSIPP--------KGLKISSTFVGNSTAIQEIFRRVGEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB1_SUIBO (Tubulin beta-1 chain OS=Suillus bovinus GN=TUBB1 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 51/142 (35.92%), Postives = 80/142 (56.34%), Query Frame = -1 Query: 301 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 726 +VPE+T +F+ +MMA DPRHG+Y+ ++RG V K+V + ++ K + FV+W P PP V+ AV + N+TA+ E+F R+ F M+ ++AF+HWY EGM+E EF+EA ++ L Sbjct: 285 TVPELTQQMFDAKNMMAASDPRHGRYLTVAAVFRGKVSMKEVEEQMQNVQNKNSAYFVEWIPNNVLSAQCDIPP--------RGVKMAVTFLGNSTAIQELFKRVSDHFTAMFKRKAFLHWYTQEGMDEMEFTEAESNMQDL 418
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB_COPC7 (Tubulin beta chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_04743 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.334e-22 Identity = 50/142 (35.21%), Postives = 81/142 (57.04%), Query Frame = -1 Query: 301 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 726 +VPE+T +F+ +MMA DPRHG+Y+ ++RG V K+V + ++ K + FV+W P PP ++ AV + N+TA+ E+F R+ +F M+ ++AF+HWY EGM+E EF+EA ++ L Sbjct: 285 TVPELTQQMFDAKNMMAASDPRHGRYLTVAAVFRGKVSMKEVEEQMQNVQNKNSAYFVEWIPNNVLTAQCDIPP--------RGLKMAVTFLGNSTAIQELFKRVSDQFTAMFKRKAFLHWYTQEGMDEMEFTEAESNMQDL 418
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB3_GOSHI (Tubulin beta-3 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.334e-22 Identity = 46/139 (33.09%), Postives = 80/139 (57.55%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 +VPE+T +++ +MM DPRHG+Y+ M+RG + K+ + + ++ K + FV+W P K + PP + A + N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 285 TVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEADEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB_UNCNE (Tubulin beta chain OS=Uncinula necator PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22 Identity = 46/139 (33.09%), Postives = 83/139 (59.71%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 +VPE+T +++P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + + N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 285 TVPELTQQMYDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSAYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB_CANAL (Tubulin beta chain OS=Candida albicans GN=TUB2 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22 Identity = 48/139 (34.53%), Postives = 81/139 (58.27%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 +VPE+T +F+ +MMA DPR+G+Y+ +RG V K+V+ + I+T+ + FVDW P + + PP + + I N+T++ E+F R+ +F M+ ++AF+HWY EGM+E EF+EA ++ Sbjct: 285 TVPELTQQMFDAKNMMAASDPRNGRYLTVAAFFRGKVSVKEVDDEMHKIQTRNSSYFVDWIPNNVQTAVCSVPP--------KDLDMSATFIGNSTSIQELFKRVGDQFSAMFRRKAFLHWYTSEGMDEMEFTEAESNM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB2_ERYPI (Tubulin beta-2 chain OS=Erysiphe pisi GN=TUB2 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22 Identity = 46/139 (33.09%), Postives = 83/139 (59.71%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 +VPE+T +++P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + + N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 285 TVPELTQQMYDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSAYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB_PLESA (Tubulin beta chain OS=Pleurotus sajor-caju PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.276e-22 Identity = 50/142 (35.21%), Postives = 81/142 (57.04%), Query Frame = -1 Query: 301 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 726 +VPE+T +F+ +MMA DPRHG+Y+ ++RG V K+V + ++ K + FV+W P PP + AV + N+TA+ E+F R++ +F M+ ++AF+HWY EGM+E EF+EA ++ L Sbjct: 285 TVPELTQQMFDAKNMMAASDPRHGRYLTVAAVFRGKVSMKEVEEQMQNVQNKNSAYFVEWIPNNVLTAQCDIPP--------RGCKMAVTFLGNSTAIQELFKRVNDQFAAMFKRKAFLHWYTQEGMDEMEFTEAESNMQDL 418
BLAST of CN187750 vs. ExPASy Swiss-Prot
Match: TBB_LEIME (Tubulin beta chain OS=Leishmania mexicana PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.276e-22 Identity = 47/139 (33.81%), Postives = 80/139 (57.55%), Query Frame = -1 Query: 310 SVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 726 SV ++T +F+ +MM DPRHG+Y+ ++RG + K+V+ + ++ K + F++W P K I PP ++ +V I NNT + E+F R+ +F M+ ++ F+HWY GEGM+E EF+EA ++ Sbjct: 287 SVADVTQQMFDAKNMMQAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFIEWIPNNIKSSICDIPP--------KGLKMSVTFIGNNTCIQEMFRRVGEQFTGMFRRKRFLHWYTGEGMDEMEFTEAESNM 417 The following BLAST results are available for this feature:
BLAST of CN187750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187750 ID=CN187750; Name=CN187750; organism=Citrus sinensis; type=EST; length=726bpback to top |