CN187744

Overview
NameCN187744
Unique NameCN187744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.252e-51
Identity = 103/174 (59.20%), Postives = 124/174 (71.26%), Query Frame = 1
Query:  190 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKEAAWGLARYAAISQDNGLV 708
            G Y +EL+  A  IA+PG+ ILA DES  T GKR  SI ++N E+NR+A R+LL TTPG   Y+SG ILFEETLYQ T DGK FVD +++  ++PGIKVDKG V L G+N E+  QGLDGLA R  +YY  GARFAKWR V+ I P  PS LA+ E A GLARY  I Q+NGLV
Sbjct:    6 GKYADELIANASYIATPGKVILAADESTGTIGKRFPSINVENVESNRRALRELLFTTPGALPYLSGVILFEETLYQKTADGKPFVDAMKDGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCAQYYTAGARFAKWRAVLKIGPTEPSPLAILENANGLARYGIICQENGLV 179          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.595e-49
Identity = 100/173 (57.80%), Postives = 124/173 (71.68%), Query Frame = 1
Query:  196 YTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVK--EAAWGLARYAAISQDNGLV 708
            Y +EL+  A  I +PG+GILA DES  T GKRLASI ++N ETNR+A R+LL T P +  Y+SG ILFEETLYQST  GK FVD L E  ++PGIKVDKG V L G++ E+  QGLDGL +R  +YY+ GARFAKWR V+ I     +L++   E A+GLARYA I Q+NGLV
Sbjct:    8 YHDELIANAAYIGTPGKGILAADESTGTIGKRLASINVENVETNRRALRELLFTAPNVLQYLSGVILFEETLYQSTAAGKPFVDVLNEAGVLPGIKVDKGTVELAGTDGETTTQGLDGLGARCAKYYEAGARFAKWRAVLKIGPNEPSLSILSIENAYGLARYAVICQENGLV 180          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.046e-48
Identity = 99/174 (56.90%), Postives = 121/174 (69.54%), Query Frame = 1
Query:  190 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKEAAWGLARYAAISQDNGLV 708
            G Y +EL+K A  I +PG+GILA DES  T GKR ASI ++N E NR++ R+LL  TPG   Y+SG ILFEETLYQ T DGK FVD L+E  ++PGIKVDKG + + G+  E+  QG D L  R  +YY+ GARFAKWR V+ I P  PS LA+   A GLARYA I Q+NGLV
Sbjct:    6 GKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFCTPGALQYLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTIEVAGTEKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLAIDLNAQGLARYAIICQENGLV 179          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.046e-48
Identity = 100/174 (57.47%), Postives = 122/174 (70.11%), Query Frame = 1
Query:  190 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKEAAWGLARYAAISQDNGLV 708
            G Y +EL+K A  I +PG+GILA DES  T GKRL+SI ++N E NR+A R+LL   PG   YISG ILFEETLYQ T DGK FVD L+E  ++PGIKVDKG + + G++ E+  QG D L  R  +YY+ GARFAKWR V+ I P  PS LA+   A GLARYA I Q+NGLV
Sbjct:    6 GKYKDELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEENRRALRELLFCCPGALQYISGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTIEVVGTDKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLAIDLNAQGLARYAIICQENGLV 179          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.577e-47
Identity = 98/175 (56.00%), Postives = 124/175 (70.86%), Query Frame = 1
Query:  196 YTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTP-GLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCG---PSALAVKEAAWGLARYAAISQDNGLV 708
            + +EL+ TAK I +PG+GILA DES  T G R   I L+N E NR+AYR+LL+ T  G+ ++I G IL+EETLYQ   DG+ F D LRE+ I  GIKVDKG+VP+PG++ E+  QGLDGLA R  +YY+ GARFAKWR V+ I      PS L++ E A  LARYAAI Q+NGLV
Sbjct:    5 FADELIATAKAIVAPGKGILAADESTNTIGARFKKINLENNEENRRAYRELLIGTGNGVNEFIGGIILYEETLYQKMADGRLFTDVLREQKIHIGIKVDKGVVPIPGTDGETSTQGLDGLAERCKKYYEAGARFAKWRAVLKIDLAKNCPSQLSITENAHTLARYAAICQENGLV 179          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.365e-47
Identity = 99/173 (57.23%), Postives = 122/173 (70.52%), Query Frame = 1
Query:  196 YTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLG-DYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCG-PSALAVKEAAWGLARYAAISQDNGLV 708
            Y +EL+  A  I +PG+GILA DES  T GKRL+SI ++N E+NRQA R+LL T   L   Y+SG ILFEETLYQ T  GK FVD L E  ++PGIKVDKG V L G++ E+  QGLDGL +R  +YY+ GARFAKWR V+ I    PS  ++ E A+GLARYA I Q+NGLV
Sbjct:    8 YHDELIANAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRQALRELLFTASWLFLQYLSGVILFEETLYQKTAAGKPFVDVLNEAGVLPGIKVDKGTVELAGTDGETTTQGLDGLGARCRKYYEAGARFAKWRAVLKIGANEPSEHSIHENAYGLARYAVICQENGLV 180          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.849e-46
Identity = 99/172 (57.56%), Postives = 117/172 (68.02%), Query Frame = 1
Query:  202 EELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCG---PSALAVKEAAWGLARYAAISQDNGLV 708
            EEL  TA+ +   G+GILA DES  T  KR  +I L+NT  NR +YR LL  T GLG +ISGAILFEETL+Q    G   V+ L  ENI+PGIKVDKGLV +P ++ E   QGLDGLA R  EYYK GARFAKWRTV+ I      P+ L++ E AWGLARYA+I Q N LV
Sbjct:   20 EELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGTKGLGKFISGAILFEETLFQKNEAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIHETAWGLARYASICQQNRLV 191          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.849e-46
Identity = 99/172 (57.56%), Postives = 117/172 (68.02%), Query Frame = 1
Query:  202 EELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCG---PSALAVKEAAWGLARYAAISQDNGLV 708
            EEL  TA+ +   G+GILA DES  T  KR  +I L+NT  NR +YR LL  T GLG +ISGAILFEETL+Q    G   V+ L  ENI+PGIKVDKGLV +P ++ E   QGLDGLA R  EYYK GARFAKWRTV+ I      P+ L++ E AWGLARYA+I Q N LV
Sbjct:   20 EELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGTKGLGKFISGAILFEETLFQKNEAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIHETAWGLARYASICQQNRLV 191          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.859e-46
Identity = 93/170 (54.71%), Postives = 120/170 (70.59%), Query Frame = 1
Query:  202 EELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCG-PSALAVKEAAWGLARYAAISQDNGLV 708
            E+L +TA+ + +PG+GI+AIDES +T  KR + +G++NTE NR+AYR+LLLTTP L DYISGAILF+ET+ Q T DG  F   + +  I+PGIKVDKG  PL G   E   +GLDGL +R  EYY  GARFAKWR V++I    PS   ++  A  LARYAA+ Q+ GLV
Sbjct:    4 EQLAETAQAMVAPGKGIIAIDESTSTIAKRFSGVGIENTEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDGVPFAKYMADHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANAHALARYAALCQEQGLV 173          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.289e-46
Identity = 93/170 (54.71%), Postives = 120/170 (70.59%), Query Frame = 1
Query:  202 EELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCG-PSALAVKEAAWGLARYAAISQDNGLV 708
            E+L +TA+ + +PG+GI+AIDES +T  KR AS+G++N E NR+AYR+LLLTTP L DYISGAILF+ET+ Q T DG  F + +    I+PGIKVDKG  PL G   E   +GLDGL +R  EYY  GARFAKWR V++I    PS   ++  +  LARYAA+ Q+ GLV
Sbjct:    4 EQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDGVPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANSHALARYAALCQEQGLV 173          
The following BLAST results are available for this feature:
BLAST of CN187744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF_SPIOL2.252e-5159.20Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_CICAR3.595e-4957.80Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ORYSJ1.046e-4856.90Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF_MAIZE1.046e-4857.47Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_DICDI2.577e-4756.00Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF2_PEA3.365e-4757.23Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_PLAFA2.849e-4657.56Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF_PLAF72.849e-4657.56Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF1_XANCP4.859e-4654.71Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANAC8.289e-4654.71Probable fructose-bisphosphate aldolase class 1 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0004P01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187744 ID=CN187744; Name=CN187744; organism=Citrus sinensis; type=EST; length=710bp
GTTGTTCTTAGAAGGCCACGAAAAGTCGGATCCTCGAAATAATCACAAGC
AACAATGGCCTGGGCAAGTTTTGCGAAGCTAAATGCTGCGTCGTCTCAGT
GGATCGGTCAACAGTCCTTCACTCAACGCACCGGATCTTCTTCTTCGACT
CGATTCGCGACTCGCCGCGTCTCCGTCCCGATCCGAGCTGGCGCTTACAC
TGAGGAACTCGTCAAAACAGCTAAAACAATTGCATCACCTGGTCGCGGTA
TTCTAGCAATTGATGAATCAAATGCAACCTGTGGGAAGAGGTTGGCATCG
ATTGGATTGGACAATACAGAGACCAATAGACAGGCTTACAGGCAACTTTT
GCTGACCACTCCAGGCCTTGGTGATTATATTTCTGGTGCCATTCTTTTTG
AGGAGACACTGTACCAATCAACTACAGATGGAAAAAAGTTTGTGGACTGC
TTGCGTGAGGAAAATATCGTGCCTGGCATTAAAGTTGACAAGGGTTTGGT
TCCTCTACCAGGATCAAACAATGAATCGTGGTGCCAAGGCTTGGATGGAT
TGGCATCAAGATCCACTGAATACTACAAGCAAGGTGCTCGATTTGCTAAG
TGGAGGACAGTTGTTAGCATTCCATGTGGTCCTTCTGCTCTGGCTGTGAA
AGAAGCTGCATGGGGCCTTGCACGATATGCTGCTATTTCTCAGGATAATG
GACTTGTGCC
back to top