CN187743

Overview
NameCN187743
Unique NameCN187743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.195e-26
Identity = 62/111 (55.86%), Postives = 78/111 (70.27%), Query Frame = -1
Query:  277 TLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMN--QAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 603
            T+T LRR VP AVPGI FL GGQSE++AT NLNA+N  Q   PW ++FSY RALQ +VLK W G+ EN  AAQK+LL R+KAN  A LG Y+ E  +  A + +FV  ++Y
Sbjct:  256 TVTALRRGVPAAVPGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKYAGEDAAGAAAESLFVAKHSY 366          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 9.346e-26
Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGE-SEEAKKGMFVKGYTY 612
            A+YT+  L+R VP AVP I+FL GGQSE EATLNLNAMN+     PW +SFS+ RALQ + LK W G+ EN E A+ + L R KANS A LGTY  +    E A + + VK Y Y
Sbjct:  244 AEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.346e-26
Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAPN--PWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGE-SEEAKKGMFVKGYTY 612
            A++T+  L+R VP AVP ++FL GGQSE EAT+NLNA+NQ     PW +SFS+ RALQ + LK W G+ EN + AQ +LL RAKANS A LGTY    +  E A + + VK Y Y
Sbjct:  245 AEHTVRALQRTVPAAVPAVVFLSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 9.346e-26
Identity = 60/115 (52.17%), Postives = 79/115 (68.70%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGES-EEAKKGMFVKGYTY 612
            A  T+T LRR VPPAVPG+ FL GGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  G Y+  G+S   A + +F+  + Y
Sbjct:  250 AMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.221e-25
Identity = 58/110 (52.73%), Postives = 76/110 (69.09%), Query Frame = -1
Query:  277 TLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQ-APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 603
            T+  LRR VPPA+PG++FL GGQSE EA++NLN++N   P+PW ++FSY RALQ +VL TWQG+ EN   A++ LL RA+ANSLA  G Y      E A   ++ K Y Y
Sbjct:  260 TVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAGGENAGASLYEKKYVY 369          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.221e-25
Identity = 58/110 (52.73%), Postives = 76/110 (69.09%), Query Frame = -1
Query:  277 TLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQ-APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 603
            T+  LRR VPPA+PG++FL GGQSE EA++NLN++N   P+PW ++FSY RALQ +VL TWQG+ EN   A++ LL RA+ANSLA  G Y      E A   ++ K Y Y
Sbjct:  260 TVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAGGENAGASLYEKKYVY 369          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.082e-25
Identity = 61/113 (53.98%), Postives = 73/113 (64.60%), Query Frame = -1
Query:  277 KYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 609
            +YT+  LRR VP AVPGI+FL GGQSE +ATLNLNAMN+     PW +SFS+ RALQ + LKTW G+ EN   AQ   L R KANS A LG Y     +  A + + VK Y Y
Sbjct:  245 EYTVNALRRTVPAAVPGIVFLSGGQSEEQATLNLNAMNKFDVVKPWTLSFSFGRALQQSTLKTWSGKKENVGKAQDVFLARCKANSEATLGKYGGGSGTGLASESLHVKDYKY 357          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.719e-25
Identity = 61/115 (53.04%), Postives = 76/115 (66.09%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAK-KGMFVKGYTY 612
            A  T+T LRR VP AVPGI FL GGQSE EA+LNLNAMNQ     PW +SFSY RALQ + L  W+G+  N +A+Q + + RAK NSLA  G Y   G++ +A  + +F   YTY
Sbjct:  250 AMATVTALRRTVPAAVPGICFLSGGQSEEEASLNLNAMNQLSLHRPWKLSFSYGRALQASALSAWKGQAANKKASQDAFVTRAKINSLASKGEYKPSGQAGQASTQSLFTASYTY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.058e-25
Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTY-SAEGESEEAKKGMFVKGYTY 612
            A++T+  L+R VP AVP ++FL GGQSE EA++NLNA+NQ     PW +SFS+ RALQ + LK W G+ EN +AAQ +LL RAKANS A LGTY  A      A + + VK Y Y
Sbjct:  245 AEHTVRALQRTVPAAVPAVVFLSGGQSEEEASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.912e-25
Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = -1
Query:  277 YTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQ-APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 606
            +T+  LRR VPPA+PG+ FL GGQSE +A++NLN++N   P+PW ++FSY RALQ +VL TWQG+ EN   A++ LL RA+ANSLA  G Y        A   ++ K Y Y
Sbjct:  248 FTVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPHPWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAGGSTAGASLYEKKYVY 358          
The following BLAST results are available for this feature:
BLAST of CN187743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF2_CAEEL4.195e-2655.86Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
ALF_ORYSJ9.346e-2653.91Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF_CICAR9.346e-2653.04Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALDOA_RAT9.346e-2652.17Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALF_PLAFA1.221e-2552.73Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF_PLAF71.221e-2552.73Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF1_PEA2.082e-2553.98Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALDOB_DANRE2.719e-2553.04Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]
ALF2_PEA6.058e-2553.04Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PLABA7.912e-2550.45Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187743 ID=CN187743; Name=CN187743; organism=Citrus sinensis; type=EST; length=612bp
AAAANANAANGANTCCCTTTAAAGAGCCCCCCTTTCGCTGGGCTACAGTT
TGTAAAATCTTTTCTTATCTCACAGGTTTTATTCAACCTCTCTAGTTATT
AGGTGGGTAAAAGAAAATGAAAAAACTTCTAATACAAATCTTGTCCGTAT
CAATCGCTTGCCCCCAAAAAAATTTTAAAAAAAGGGAAGGAACCAAAACA
AAAGCAAGTGCGCAATGACACAAGTGTCATGAGTTGCCTCAGGCAGGCTC
AAACTGCATAGTATATTATTGGCTTAGTAAGTGTAGCCCTTGACAAACAT
TCCTTTCTTGGCTTCCTCGCTTTCACCTTCTGCGGAGTACGTCCCAAGCT
GCGCCAAGGAATTTGCCTTTGCACGCACCAATAGTGACTTTTGTGCAGCT
TCAGTATTCTCAGGACGACCTTGCCATGTCTTAAGAACAGTGTTCTGAAG
TGCACGGGCATAAGAAAAGGACACGTGCCAGGGGTTGGGGGCTTGGTTCA
TCGCATTCAAGTTCAATGTTGCTTCCACTTCTGATTGTCCTCCAAACAAA
AACATGATTCCTGGGACTGCAGGGGGTACTCTCCTCCTGAGCATTGTAAG
TGTATATTTAGC
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