CN187743

Overview
NameCN187743
Unique NameCN187743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 7.912e-25
Identity = 59/115 (51.30%), Postives = 78/115 (67.83%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGES-EEAKKGMFVKGYTY 612
            A  T+T LRR VPPAV G+ FL GGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  G Y+  G+S   A + +F+  + Y
Sbjct:  250 AMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 1.350e-24
Identity = 60/112 (53.57%), Postives = 76/112 (67.86%), Query Frame = -1
Query:  277 TLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESE-EAKKGMFVKGYTY 603
            T+T L R VP AVPGI FL GGQSE EA+LNLNAMNQ+P   PW ++FSY RALQ + L  W G+ EN +AAQ++   RA+ NSLA  G Y   G+++  A + +F   YTY
Sbjct:  253 TVTTLLRTVPAAVPGICFLSGGQSEEEASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.350e-24
Identity = 60/115 (52.17%), Postives = 78/115 (67.83%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGES-EEAKKGMFVKGYTY 612
            A  T+T LRR VPPAV GI FL GGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  G Y+  G++   A + +FV  + Y
Sbjct:  250 AMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.350e-24
Identity = 60/115 (52.17%), Postives = 78/115 (67.83%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGES-EEAKKGMFVKGYTY 612
            A  T+T LRR VPPAV GI FL GGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  G Y+  G++   A + +FV  + Y
Sbjct:  250 AMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 1.763e-24
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = -1
Query:  277 TLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGES-EEAKKGMFVKGYTY 603
            T+T LRR VPPAV GI FL GGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  G Y+  G++   A + +FV  + Y
Sbjct:  253 TVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.302e-24
Identity = 55/114 (48.25%), Postives = 76/114 (66.67%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAPN--PWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A+ T+  L+R VP AVPG++FL GGQSE++AT NLNA+N+ P   PW +SFS+ RALQ + +  WQG+PEN +A Q   L  AKAN  A LG +  E ++   +K +FV  + Y
Sbjct:  250 ARATVEALQRTVPVAVPGVVFLSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAGQKSLFVANHAY 363          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.302e-24
Identity = 59/114 (51.75%), Postives = 74/114 (64.91%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A  TLT LRR VPPAVPGI FL GGQSE +A+++LNA+N+     PW ++FSY RALQ +VLK W G+ EN +AAQ  L+ RAK N  A  G Y   G    A + +FV  + Y
Sbjct:  250 AMATLTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKPTGTGAAAGESLFVANHAY 363          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.302e-24
Identity = 58/115 (50.43%), Postives = 78/115 (67.83%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGES-EEAKKGMFVKGYTY 612
            A  T+T LRR VPPAV G+ FL GGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  G Y+  G++   A + +F+  + Y
Sbjct:  250 AMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.007e-24
Identity = 59/114 (51.75%), Postives = 76/114 (66.67%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A+YT+  L+R VP AVP ++FL GGQSE EAT NLNAMN+     PW +SFS+ RALQ + LK W G+ EN E A+ + L R KANS A LGTY  +G++    + + VK Y Y
Sbjct:  244 AEYTVRTLQRTVPAAVPAVLFLSGGQSEEEATRNLNAMNKLSTKKPWSLSFSFGRALQASTLKAWAGKVENLEKARAAFLARCKANSEATLGTY--KGDAAADTESLHVKDYKY 355          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 3.007e-24
Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A  T+T LRR VPPAVPG+ FL GGQSE EA+LNLNA+N+   P PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  G Y   G+   A + ++V  + Y
Sbjct:  250 AMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGDGGAAAQSLYVANHAY 363          
The following BLAST results are available for this feature:
BLAST of CN187743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOA_MOUSE7.912e-2551.30Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOB_CHICK1.350e-2453.57Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALDOA_PANTR1.350e-2452.17Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALDOA_HUMAN1.350e-2452.17Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALDOA_PONAB1.763e-2452.68Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALF_ECHMU2.302e-2448.25Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]
ALF1_LAMJA2.302e-2451.75Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOA_RABIT2.302e-2450.43Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALF_MAIZE3.007e-2451.75Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALDOC_RAT3.007e-2448.25Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187743 ID=CN187743; Name=CN187743; organism=Citrus sinensis; type=EST; length=612bp
AAAANANAANGANTCCCTTTAAAGAGCCCCCCTTTCGCTGGGCTACAGTT
TGTAAAATCTTTTCTTATCTCACAGGTTTTATTCAACCTCTCTAGTTATT
AGGTGGGTAAAAGAAAATGAAAAAACTTCTAATACAAATCTTGTCCGTAT
CAATCGCTTGCCCCCAAAAAAATTTTAAAAAAAGGGAAGGAACCAAAACA
AAAGCAAGTGCGCAATGACACAAGTGTCATGAGTTGCCTCAGGCAGGCTC
AAACTGCATAGTATATTATTGGCTTAGTAAGTGTAGCCCTTGACAAACAT
TCCTTTCTTGGCTTCCTCGCTTTCACCTTCTGCGGAGTACGTCCCAAGCT
GCGCCAAGGAATTTGCCTTTGCACGCACCAATAGTGACTTTTGTGCAGCT
TCAGTATTCTCAGGACGACCTTGCCATGTCTTAAGAACAGTGTTCTGAAG
TGCACGGGCATAAGAAAAGGACACGTGCCAGGGGTTGGGGGCTTGGTTCA
TCGCATTCAAGTTCAATGTTGCTTCCACTTCTGATTGTCCTCCAAACAAA
AACATGATTCCTGGGACTGCAGGGGGTACTCTCCTCCTGAGCATTGTAAG
TGTATATTTAGC
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