CN187743

Overview
NameCN187743
Unique NameCN187743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 111.309 bits (277), Expect = 3.927e-24
Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A  T+T LRR VPPAVPG+ FL GGQSE EA+LNLNA+N+ P   PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  G Y   G+   A + +++  + Y
Sbjct:  250 AMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGDGGAAAQSLYIANHAY 363          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.698e-24
Identity = 61/115 (53.04%), Postives = 72/115 (62.61%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGES-EEAKKGMFVKGYTY 612
            A  T+T LRR VP AVPGI FL GGQSE +A+LNLNA+NQ P   PW +SFSY RALQ +VLK W G P N  AA+K    RA  N LA  G Y   G S   A + +F+  + Y
Sbjct:  250 AMATVTALRRTVPSAVPGITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.748e-24
Identity = 57/112 (50.89%), Postives = 78/112 (69.64%), Query Frame = -1
Query:  277 TLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAPN--PWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESE-EAKKGMFVKGYTY 603
            T+T L+R VP AVPG++FL GGQSE +ATLNLNA+NQ     PW ++FSY RALQ + L  W G+ EN  AAQ+ LL RA+ NSLA +G Y+ +  ++  A + +FV  ++Y
Sbjct:  255 TVTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.143e-23
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEG-ESEEAKKGMFVKGYTY 612
            A  T+T LRR VPPAVPG+ FL GGQSE EA++NLNA+N  P   PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA LG Y   G +S  A + ++V  + Y
Sbjct:   23 AMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.492e-23
Identity = 60/116 (51.72%), Postives = 76/116 (65.52%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYS--AEGESEEAKKGMFVKGYTY 612
            A+YT+T LRR VPPA+PGI+FL G Q E +ATLNLNAMN+     PW ++FS+  ALQ + +K W G+PEN   AQ   L R KAN  A LG Y+  A G+S  A + + V GY Y
Sbjct:  244 AEYTVTALRRTVPPAIPGIVFLSGIQREEQATLNLNAMNKLDVLKPWTLTFSFGGALQQSAIKAWAGKPENVAKAQAKFLTRCKANKDATLGKYTGWASGDS-AAFENLVVIGYRY 358          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 1.492e-23
Identity = 55/115 (47.83%), Postives = 74/115 (64.35%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGE-SEEAKKGMFVKGYTY 612
            A  T+T LRR VPPAVPG+ FL GGQSE EA+ NLNA+N+ P   PW ++FSY RALQ + L  W+G+ +N EAA +  + RA+ N LA  G Y   GE    A + +++  + Y
Sbjct:  250 AMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.949e-23
Identity = 56/114 (49.12%), Postives = 73/114 (64.04%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A  T+T LRR VPPAV G+ FL GGQSE EA++NLNA+N  P   PW ++FSY RALQ + L  W+G  EN +AA +  L RA+AN LA  G Y + G    A + ++V  + Y
Sbjct:  250 AMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDGSAGQSLYVANHAY 363          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.545e-23
Identity = 55/111 (49.55%), Postives = 73/111 (65.77%), Query Frame = -1
Query:  277 TLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 603
            T+  L+R VPPAVPGI FL GGQSE++AT NLN +N+   P PW ++FS+ RALQ +VL TW+G+ EN  AAQ+ LL  AKAN  A +G +     +    K +FV  + Y
Sbjct:  253 TVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGDKSLFVANHAY 363          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 2.545e-23
Identity = 55/115 (47.83%), Postives = 74/115 (64.35%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEA-KKGMFVKGYTY 612
            A  T+T LRR VP +VPGI FL GGQSE EA+++LNA+NQ P   PW ++FSY RALQ + L  WQG+  N  A Q+  + RAK N LA  G Y   G +++A ++ ++   Y Y
Sbjct:  250 AMATVTALRRTVPASVPGICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.324e-23
Identity = 54/114 (47.37%), Postives = 77/114 (67.54%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A+YT+  L R +PPA+PG+ FL GG SEV A+  LNAMN  P   PW ++FSYARALQ++ +K W G+    EA +++ + RAK NSLAQLG Y+   + ++  + ++V G TY
Sbjct:  260 AEYTVKTLARVIPPALPGVTFLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKYN-RADDDKDSQSLYVAGNTY 372          
The following BLAST results are available for this feature:
BLAST of CN187743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOC_MOUSE3.927e-2447.37Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALF2_LAMJA6.698e-2453.04Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALF1_CAEEL8.748e-2450.89Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALDOC_CHICK1.143e-2348.70Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALF_ARATH1.492e-2351.72Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALDOC_PANTR1.492e-2347.83Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALDOC_CARAU1.949e-2349.12Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALF_SCHMA2.545e-2349.55Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALDOB_SPAAU2.545e-2347.83Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALF_TRYBB3.324e-2347.37Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187743 ID=CN187743; Name=CN187743; organism=Citrus sinensis; type=EST; length=612bp
AAAANANAANGANTCCCTTTAAAGAGCCCCCCTTTCGCTGGGCTACAGTT
TGTAAAATCTTTTCTTATCTCACAGGTTTTATTCAACCTCTCTAGTTATT
AGGTGGGTAAAAGAAAATGAAAAAACTTCTAATACAAATCTTGTCCGTAT
CAATCGCTTGCCCCCAAAAAAATTTTAAAAAAAGGGAAGGAACCAAAACA
AAAGCAAGTGCGCAATGACACAAGTGTCATGAGTTGCCTCAGGCAGGCTC
AAACTGCATAGTATATTATTGGCTTAGTAAGTGTAGCCCTTGACAAACAT
TCCTTTCTTGGCTTCCTCGCTTTCACCTTCTGCGGAGTACGTCCCAAGCT
GCGCCAAGGAATTTGCCTTTGCACGCACCAATAGTGACTTTTGTGCAGCT
TCAGTATTCTCAGGACGACCTTGCCATGTCTTAAGAACAGTGTTCTGAAG
TGCACGGGCATAAGAAAAGGACACGTGCCAGGGGTTGGGGGCTTGGTTCA
TCGCATTCAAGTTCAATGTTGCTTCCACTTCTGATTGTCCTCCAAACAAA
AACATGATTCCTGGGACTGCAGGGGGTACTCTCCTCCTGAGCATTGTAAG
TGTATATTTAGC
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