CN187743

Overview
NameCN187743
Unique NameCN187743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 3.324e-23
Identity = 55/115 (47.83%), Postives = 74/115 (64.35%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGE-SEEAKKGMFVKGYTY 612
            A  T+T LRR VPPAVPG+ FL GGQSE EA+LNLNA+N+   P PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  G Y   GE    A + +++  + Y
Sbjct:  250 AMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 4.342e-23
Identity = 59/115 (51.30%), Postives = 72/115 (62.61%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAK-KGMFVKGYTY 612
            A  T+T L R VP AVPGI FL GG SE +ATLNLNA+N  P   PW +SFSY RALQ + L  W G+ EN +A Q++ + RA ANS A  G Y   G S+ A  + +F   YTY
Sbjct:  250 AMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQYVHMGSSDSASTQSLFTASYTY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 9.672e-23
Identity = 54/115 (46.96%), Postives = 73/115 (63.48%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGE-SEEAKKGMFVKGYTY 612
            A  T+T LRR VPPAVPG+ FL GGQSE EA+ NLNA+N+   P PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  G Y   GE    A + +++  + Y
Sbjct:  250 AMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.814e-22
Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 612
            A  T+T LRR VPPAV G+ FL GGQSE EA++NLN++N  P   PW ++FSY RALQ + L  W+G   N +AA +  + RA+AN LA  G Y + G    A + ++V  + Y
Sbjct:  250 AMATVTALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCGAAGQSLYVANHAY 363          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.675e-22
Identity = 58/115 (50.43%), Postives = 70/115 (60.87%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAK-KGMFVKGYTY 612
            A  T+T L R VP AVPGI FL GG SE +ATLNLNA+N  P   PW +SFSY RALQ + L  W G+ EN +  Q++ + RA ANS A  G Y   G S  A  + +F   YTY
Sbjct:  250 AMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 8.188e-22
Identity = 57/115 (49.57%), Postives = 70/115 (60.87%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGES-EEAKKGMFVKGYTY 612
            A  T+T L R VP AVPGI FL GG SE +ATLNLNA+N+   P PW +SFSY RALQ + L  W G+  N +A Q++ + RA AN  A  G Y   G S   A + +F   YTY
Sbjct:  250 AMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAMANCQAAQGQYVHTGSSGAAATQSLFTASYTY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOB_RABIT (Fructose-bisphosphate aldolase B OS=Oryctolagus cuniculus GN=ALDOB PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.397e-21
Identity = 57/115 (49.57%), Postives = 69/115 (60.00%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAK-KGMFVKGYTY 612
            A  T+T L R VP AVPGI FL GG SE +ATLNLNA+N  P   PW +SFSY RALQ + L  W G+ EN +A Q++ + RA  N  A  G Y   G S  A  + +F   YTY
Sbjct:  250 AMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRAVVNCQAAKGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOB_HUMAN (Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.397e-21
Identity = 58/115 (50.43%), Postives = 69/115 (60.00%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAK-KGMFVKGYTY 612
            A  T+T L R VP AVPGI FL GG SE +ATLNLNA+N  P   PW +SFSY RALQ + L  W G+  N EA Q++ + RA AN  A  G Y   G S  A  + +F   YTY
Sbjct:  250 AMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 1.824e-21
Identity = 58/115 (50.43%), Postives = 69/115 (60.00%), Query Frame = -1
Query:  277 AKYTLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAK-KGMFVKGYTY 612
            A  T+T L R VP AVPGI FL GG SE +ATLNLNA+N  P   PW +SFSY RALQ + L  W G+  N EA Q++ + RA AN  A  G Y   G S  A  + +F   YTY
Sbjct:  250 AMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAVANHQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN187743 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 102.064 bits (253), Expect = 2.382e-21
Identity = 56/111 (50.45%), Postives = 69/111 (62.16%), Query Frame = -1
Query:  277 TLTMLRRRVPPAVPGIMFLFGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGTYSAEGESEEAKKGMFVKGYTY 603
            T+  LRR VP AV G+ FL GGQSE EAT+NL+A+N  P   PW ++FSY RALQ +VL+ W G+ EN  A Q  LL RAKAN  A  G Y A G +      +FV  + Y
Sbjct:  252 TVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVA-GSAGAGSGSLFVANHAY 361          
The following BLAST results are available for this feature:
BLAST of CN187743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOC_MACFA3.324e-2347.83Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOB_SHEEP4.342e-2351.30Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALDOC_HUMAN9.672e-2346.96Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]
ALDCB_DANRE2.814e-2246.49Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDOB_BOVIN3.675e-2250.43Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALDOB_MOUSE8.188e-2249.57Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALDOB_RABIT1.397e-2149.57Fructose-bisphosphate aldolase B OS=Oryctolagus cu... [more]
ALDOB_HUMAN1.397e-2150.43Fructose-bisphosphate aldolase B OS=Homo sapiens G... [more]
ALDOB_PONAB1.824e-2150.43Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALF_DROME2.382e-2150.45Fructose-bisphosphate aldolase OS=Drosophila melan... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0004P01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187743 ID=CN187743; Name=CN187743; organism=Citrus sinensis; type=EST; length=612bp
AAAANANAANGANTCCCTTTAAAGAGCCCCCCTTTCGCTGGGCTACAGTT
TGTAAAATCTTTTCTTATCTCACAGGTTTTATTCAACCTCTCTAGTTATT
AGGTGGGTAAAAGAAAATGAAAAAACTTCTAATACAAATCTTGTCCGTAT
CAATCGCTTGCCCCCAAAAAAATTTTAAAAAAAGGGAAGGAACCAAAACA
AAAGCAAGTGCGCAATGACACAAGTGTCATGAGTTGCCTCAGGCAGGCTC
AAACTGCATAGTATATTATTGGCTTAGTAAGTGTAGCCCTTGACAAACAT
TCCTTTCTTGGCTTCCTCGCTTTCACCTTCTGCGGAGTACGTCCCAAGCT
GCGCCAAGGAATTTGCCTTTGCACGCACCAATAGTGACTTTTGTGCAGCT
TCAGTATTCTCAGGACGACCTTGCCATGTCTTAAGAACAGTGTTCTGAAG
TGCACGGGCATAAGAAAAGGACACGTGCCAGGGGTTGGGGGCTTGGTTCA
TCGCATTCAAGTTCAATGTTGCTTCCACTTCTGATTGTCCTCCAAACAAA
AACATGATTCCTGGGACTGCAGGGGGTACTCTCCTCCTGAGCATTGTAAG
TGTATATTTAGC
back to top