CX675507

Overview
NameCX675507
Unique NameCX675507
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675507 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.513e-28
Identity = 79/234 (33.76%), Postives = 124/234 (52.99%), Query Frame = -1
Query:  140 SFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-----YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 826
            +F +R F  I+ IK A+E +CP  VSC+DI+ L+ RD V   GGP   + TGRRDG  S  E   + LP    S+  +L  F   G++    VALLG+H+VG   C   V R+         DP+++P     + + C  A+P   A    ++   TP+  DN ++  I + KG++++D  +A+D  T   V + A + + F ++F+ A+  +   + LTG+ GEIR  C   N
Sbjct:   91 NFSVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLRNTC--AVPGGFAA-LDQSMPVTPVSFDNLFFGQIRERKGILLIDQLIASDPATSGVVLQYASNNELFKRQFAIAMVKMGAVDVLTGSAGEIRTNCRAFN 321          
BLAST of CX675507 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.513e-28
Identity = 75/237 (31.65%), Postives = 121/237 (51.05%), Query Frame = -1
Query:  140 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-YPEVDPALNPDHVPH-------MLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKM---AKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 817
            +R F  I+ IK  +E  CP  VSC+DIL L+ RD V   GGP+  +  GRRD  K+      Q++P  N S+  ++  F   G++   L+AL G+H++G+  CV    R+  P ++     D           +  +C D+  D +       D  TP   DN+Y+ N+L+ +GL++ D+ L ++       +K+   A +QD FF +F  ++  +   N LTG +GEIR+ C   N
Sbjct:  102 LRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRIVQPNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPL---DIKTPAYFDNHYFINLLEGRGLLISDNVLVSEDHEGEIFQKVWEYAVNQDLFFIDFVESMLKMGNINVLTGIEGEIRENCRFVN 335          
BLAST of CX675507 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.894e-28
Identity = 72/229 (31.44%), Postives = 115/229 (50.22%), Query Frame = -1
Query:  152 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIP--DPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 817
            +R F  IE+IK  +E  CP  VSCADI+ L+ R+ VV  GGP+ P+  GRRD   +  +     LP   +++  +  +F  +G+D   +V L G+H++G   C  + HRL+      + DP L       +L K  D  P  D    +    D  + +  DN YY N+++N GL+  D  L TD      VK  +++   F ++F+ ++  +     +TG+ G IR  C
Sbjct:  120 VRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSA--LLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTAAALVKSYSENPYLFSRDFAVSMVKMGNIGVMTGSDGVIRGKC 346          
BLAST of CX675507 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 7.698e-28
Identity = 83/243 (34.16%), Postives = 121/243 (49.79%), Query Frame = -1
Query:  128 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 814
            R F  I+ +K AVE  CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + F  +G++ +  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +   CP    +      V  D  TP + DN YY N+ + KGL+  D +L     ATD  T P V+  A S   FF  F  A+  +    PLTGT+G+IR  C + N    LHD
Sbjct:  105 RGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP---LNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQELFSSPNATD--TIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNSNSLLHD 342          
BLAST of CX675507 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.005e-27
Identity = 74/231 (32.03%), Postives = 115/231 (49.78%), Query Frame = -1
Query:  140 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 817
            +R F  I++ K  +E  C GVVSCADI+  + RD V   GG    +  GRRDGR S A      LP    ++  + + F+  G+    +V L G+H++GR+HC    +RLY        DP L+P +   +  +CP    +   V  V  +  +P + D  YY ++L N+GL   D  L TD  T   V++ A +   +  +F+ A+  + +   L G  G+IR  C + N
Sbjct:  133 LRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKTQCPQGSTNTNLV--VPMNPSSPSITDVGYYVDVLRNRGLFTSDQTLLTDTTTATQVRQNAGNPFLWKNKFASAMVKMGQLGVLIGEAGQIRANCRVIN 361          
BLAST of CX675507 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.313e-27
Identity = 79/238 (33.19%), Postives = 118/238 (49.58%), Query Frame = -1
Query:  140 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP----DAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD----KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 814
            R F  I+ IK AVE  CPGVVSCADIL L+ RD VV  GGP   +  GR+DG  +        LP   + +  ++ +F A+ ++   +VAL G+H+ G+  C    +RL+        D  L    + ++   CP      I  P        DR T    DNNY++N+L+ KGL+  D  L +       T+  V+  ++SQ  FF++F+ A  ++   N   G  GE+R  C + N
Sbjct:  100 RGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANN-LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCPLGGNSNITAPL-------DRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCA--MIRMGNISNGASGEVRTNCRVIN 327          
BLAST of CX675507 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.715e-27
Identity = 78/235 (33.19%), Postives = 116/235 (49.36%), Query Frame = -1
Query:  140 GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPD------HVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 820
            G   F  +++IK A+E  CPGVVSCADIL L+   GVV   GP   +  GR+D   +        +P   ++++V++ +F   G+D   LVAL G+H+ GR  C     RL+   + + NPD       +  +   CP          +   D  TP   DN+Y+ N+  N+GL+  D +L   +   T   V + A SQ  FF +F  ++  L   +PLTGT G+IR  C   N
Sbjct:   93 GAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLF-NFNGSGNPDLTVDATFLQTLQGICPQG--GNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFFDDFVSSMIKLGNISPLTGTNGQIRTDCKRVN 324          
BLAST of CX675507 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.715e-27
Identity = 76/233 (32.62%), Postives = 113/233 (48.50%), Query Frame = -1
Query:  140 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK--RTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 817
            +R F+ I+ IK  +E+ CP  VSCADIL L+ R   +  GGP   L  GRRD R +        +P  N ++  +L  F   G++   LV+L G H++G   C     RLY      + D  L   +   +   CP    D         D  +P   DN Y++ +L  KGL+  D  L T    +T   VK  A+ +  FF++F++++  +    PLTG  GEIRK C++ N
Sbjct:  117 VRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNNISPL---DLASPARFDNTYFKLLLWGKGLLTSDEVLLTGNVGKTGALVKAYAEDERLFFQQFAKSMVNMGNIQPLTGFNGEIRKSCHVIN 346          
BLAST of CX675507 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.925e-27
Identity = 76/235 (32.34%), Postives = 119/235 (50.64%), Query Frame = -1
Query:  140 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD----KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 817
            +R F  I+ IK AVE  CPGVVSCADIL L+ RD V   GGP   +  GR+DG  +        LP   + +  ++ +FAA+G++   +VAL G+H+ G+  C    +RL+        D  L    +  +   CP      K       DR +    DNNY++N+L+ KGL+  D  L +       T+  V+  ++SQ  FF++F+   +++   + + G  GE+R  C + N
Sbjct:   99 VRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSANN-LPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPL---DRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFT--CSMIRMGSLVNGASGEVRTNCRVIN 327          
BLAST of CX675507 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.112e-26
Identity = 73/232 (31.47%), Postives = 120/232 (51.72%), Query Frame = -1
Query:  140 GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVAL-LGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTR----PYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 820
            G+  F  I+  K  +ER CPGVVSCADI+ L+ RD +    GP+  + TGRRDG  +  +  +  LPD  DS++ +  +F   G+    LV L  G+H++G T C  ++ RL  + DP +NP+    +  KCP           +  D  +  V DN  ++NI + +G+++ D  L  D   +     Y++    S+  F  +F++A+  +       G +GEIR++C+  N
Sbjct:   93 GVAGFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHAKN-LPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIGTTACFFVIPRLDAQ-DPTINPEFFQILRSKCPQG---GDVNVRIPLDWDSQFVFDNQIFQNIKNGRGVILSDSVLYQDNNMKKIIDSYLETNQSSKANFAADFTKAMIKMGAIGVKIGAEGEIRRLCSATN 319          
The following BLAST results are available for this feature:
BLAST of CX675507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER28_ARATH4.513e-2833.76Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER20_ARATH4.513e-2831.65Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER10_ARATH5.894e-2831.44Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER1A_ARMRU7.698e-2834.16Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER5_VITVI1.005e-2732.03Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER59_ARATH1.313e-2733.19Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PERX_TOBAC1.715e-2733.19Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER9_ARATH1.715e-2732.62Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PERN_ARMRU2.925e-2732.34Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER13_ARATH1.112e-2631.47Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62F12_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62F12-L24-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675507 ID=CX675507; Name=CX675507; organism=Citrus sinensis; type=EST; length=826bp
TTTTAGAAAAACCATCTTATTGGGAGCTCATCTCACACTCTTTTCTTCCT
CATAGAAGAAACAAGGAAGAAAAATTTGGAGCTATTAACTTGTTGTAGCT
AATACAGCTGTTAGCTAGCTAGGACTTGTCGTGGAGCTTGTTGGCAAGAT
TGCAAACCTTTCGGATCTCACCCTTTGTACCTGTGAGAGGGTTGTTCTCA
GAAAGGAGAGTAATGGCTCTTGAAAATTCCTTGAAGAAGTAGTCTTGACT
CTTGGCCATCTTCTTAACATAAGGTCTTGTCCTCTTGTCGGTGGCTAGCT
GATGATCAACCATCATCAAGCCCTTGTTGTCCAATATGTTCCTATAGTAG
TTGTTGTCCAGCACCATGGGTGTGCCACGGTCATTCCTCACATACTGAAC
AGCCTTGGGGTCTGGGATTGCATCAGGACACTTATGGAGCATATGCGGAA
CATGGTCAGGGTTCAGTGCAGGGTCAACTTCTGGGTACAGACGGTGCACC
AGCTTCACACAATGAGTTCTGCCAACACTGTGAGATCCTAGCAGAGCAAC
AAGTCCAGGGGCGTCAATGCCGATGGCTGCAAACCTCTCAAGAACAACAG
ACATGCTGTCATTGTGATCTGGGAGATACTGCTCAAGTATCTCTGCTCTG
CTTTTTCTACCATCTCTTCTTCCTGTCTTGAGAGGAATGTAAGGGCCTCC
GAGCGCAACAACGCCATCTCTACCGGACAGGACAAGGATATCAGCACAGG
ACACAACACCAGGGCACTCTCTTTCAACAGCTTCTTTGATGTTCTCAATG
TACCTGAAGTTCCTCATACCAAAGCT
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