CN187741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_FERNB (Pseudouridine-5'-phosphate glycosidase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=psuG PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.784e-51 Identity = 108/228 (47.37%), Postives = 146/228 (64.04%), Query Frame = 3 Query: 90 ISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPRE 773 IS +V +AL G V+ALEST+I+HG+PYP N ETAK +E + NG VPATI IL+G VG+S E++ + L + K R+I + V + + ATTVSATM A + GI VF TGGIGGVH D+S D+TE+ ++ V V+SAG KSILD+ +T+E+LET V V YKTN+FP F+ S + RVDSPED A++ L + L++ PIP+E Sbjct: 3 ISEKVKKALEDGIPVIALESTVIAHGLPYPHNVETAKMLEEMALENGVVPATIGILKGEIIVGMSQEQINEM--LADEPLKIGTREIPYAVGMKKSAATTVSATMRIAKIAGIDVFATGGIGGVHIGD---WDVSQDITEMAKSDVIVVSAGCKSILDVKKTIEFLETFQVTVVGYKTNKFPIFYEGLSDFNLEHRVDSPEDIAKIFRAKKSLGIEGALLVANPIPQE 225
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_STRGG (Pseudouridine-5'-phosphate glycosidase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=psuG PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.749e-50 Identity = 108/208 (51.92%), Postives = 139/208 (66.83%), Query Frame = 3 Query: 90 ISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKA-QKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLI 710 +S EV ALS G VVALESTII+HG+P P+N A+E+E +VR+ GAVPAT+A+L+G +GL ++LER+A G A +K RD+A +A +GATTVSAT F A+ GI VF TGG+GGVHR D S+DL L RT + V+ AG+KSILD+P TL+ LET GV V Y T FP F+ +SG V V SPE+ A +I Sbjct: 25 LSAEVRAALSTGLPVVALESTIIAHGLPRPRNLSVARELEGLVRSAGAVPATVAVLDGRARIGLDGDQLERVA--GDPAVRKLGHRDLAPALAAGADGATTVSATAFLAARAGIGVFATGGLGGVHREWAENQDESADLRLLARTGITVVCAGVKSILDVPATLQRLETLGVPVVGYGTGHFPGFYLSSSGEPVDWTVHSPEEVAEVI 230
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_SALTO (Pseudouridine-5'-phosphate glycosidase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=psuG PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.749e-50 Identity = 114/239 (47.70%), Postives = 148/239 (61.92%), Query Frame = 3 Query: 60 IDSLAKNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGS-GLVIGVPIPRE 773 +D++ ++ EV++AL G VVALESTI+SHG+P P N A+E+E VR+ GAVPATI ++ G VGL EL RLA + A K + RD+A AT +GATTV+AT A+ GI VF TGG+GGVHR + D S+DLT L RTP+AV+ AG+KSILD TLE LET GV V Y+T FP F+ G + VDSPE A + + L S GLV+ P+P + Sbjct: 15 LDAVTTFHLRHGVEVADALRVGRPVVALESTIVSHGLPRPDNLRVAREIEQTVRDAGAVPATIGMVAGQLVVGLDDAELTRLATVDDVA-KLSVRDLAVAAATDADGATTVAATSAVAAAAGIRVFATGGLGGVHREAAQSFDESADLTTLARTPIAVVCAGVKSILDSGATLERLETLGVGVVGYRTRRFPGFYLTDGGFDLDWSVDSPEQVAAALAAQEQHGLHSGGLVVANPLPTD 252
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_SACEN (Pseudouridine-5'-phosphate glycosidase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=psuG PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.749e-50 Identity = 108/232 (46.55%), Postives = 144/232 (62.07%), Query Frame = 3 Query: 78 NLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPRE 773 +L IS EV +AL G VVALESTII+HG+P P+N A++ E +R+ G VPATI ++ G P VGL+ E++E LA A K + RD+ VA +G TTV+AT F A GI VF TGG+GGVH T D S+DL L TP+ ++SAG KSILD+ TLE LET + V Y+T FP F+ SG + VD+P++ A L++ L+L S L++ PIP E Sbjct: 4 SLPVISTEVRQALDAGRPVVALESTIITHGLPRPRNLAVARDAERQLRDAGVVPATIGVVAGTPTVGLTGEQIEELAA-DEAAVKISTRDLPVAVARGASGGTTVAATAFLARKAGIRVFATGGLGGVHHGAATTFDESADLVTLASTPLVLVSAGAKSILDLAATLERLETLNIPVVGYRTRRFPGFYVADSGHDLEHSVDTPQEVAALVEARDALELRSALLVANPIPPE 234
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_THEAB (Pseudouridine-5'-phosphate glycosidase OS=Thermosipho africanus (strain TCF52B) GN=psuG PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.430e-49 Identity = 108/229 (47.16%), Postives = 149/229 (65.07%), Query Frame = 3 Query: 90 ISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREH 776 IS +V +AL +VALEST+I+HG+PYP+N + A+E E IV NG VPATI IL+G VGLS E+L L + K R+I++ +A + + ATTVS+T AS+ GI VF TGGIGGVHR GE D+S D+ EL +T + V+SAG KSILDI +TLE+LET V YKT FP F+ S K+ +V++ ++ A + + KLKL S +++ PIP ++ Sbjct: 3 ISEKVQKALEENKPIVALESTVIAHGLPYPENLKVAQEFEDIVYENGCVPATIGILKGKVIVGLSKEQLIEL--VDDNPIKVGTREISYAIAMKKSAATTVSSTAKIASLAGIKVFATGGIGGVHR-GE--WDVSQDIIELSKTNIIVVSAGCKSILDIKKTLEFLETFQVLTVGYKTEYFPIFYNRLSKEKI-YKVENADEIANIFNEKNKLKLESAILVANPIPEDY 225
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_MYXXD (Pseudouridine-5'-phosphate glycosidase OS=Myxococcus xanthus (strain DK 1622) GN=psuG PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.575e-48 Identity = 103/230 (44.78%), Postives = 137/230 (59.57%), Query Frame = 3 Query: 84 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPRE 773 ++ S EV AL G +VALE+++++ G+PYP N A+ E +R GAVPA AI++G CVGL E+ RLA+ + K A RD A +ATR G TTVSAT A+ GI VF TGGIGGVHR DIS D+ L R PVAV+ AG KS+LD+P+T+E LET GV V T+E P+F++ SG + R D + AR+ + G++ VP P E Sbjct: 3 LRFSEEVRRALEAGQPLVALETSVVAQGLPYPDNLAAARACEEAIRRAGAVPAATAIIDGQLCVGLEEPEMRRLAEGKERLLKVASRDFAVAMATRATGGTTVSATCEMAAAAGIRVFSTGGIGGVHRGASEHFDISQDIAALARFPVAVVCAGAKSVLDLPKTMELLETAGVPVIGVGTDELPSFYSRGSGIPLEHRADDVDTAARIARARFESLKQGGVLYTVPPPEE 232
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_KOSOT (Pseudouridine-5'-phosphate glycosidase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=psuG PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.515e-46 Identity = 99/214 (46.26%), Postives = 135/214 (63.08%), Query Frame = 3 Query: 132 VVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPRE 773 +VALEST+I+HG+P+P NFETA +E V+ GA+P T+ I+ G +GL+ +E+E LAK K +IA +A R N ATTVSATM A GI VF TGGIGGVHR+ D+S D+ EL +T + V+ AG KSILD+ RT+E+LET V V Y+T+ P F T+ S KV R DSPE+ + + KL + +++ PIP + Sbjct: 6 IVALESTVIAHGLPWPTNFETAVSMENKVKEKGAIPKTLGIINGEIKIGLTEKEIEHLAK-AKNVMKIGTAEIAAAIALRRNAATTVSATMRLAKNAGIDVFATGGIGGVHRNVP--WDVSQDIMELSKTRMIVVCAGFKSILDVERTIEFLETFQVTVVGYQTDYMPLFHTKESEYKVNIRADSPEEIVAIFNEKEKLGIEGAILVANPIPEQ 216
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_FRAAA (Pseudouridine-5'-phosphate glycosidase OS=Frankia alni (strain ACN14a) GN=psuG PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.848e-44 Identity = 98/230 (42.61%), Postives = 139/230 (60.43%), Query Frame = 3 Query: 84 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPRE 773 + +S V +AL+ G VVALEST+I+HG+P P+N + A E+E + R G PATIA+++G+P VGL +L R+A + K + RD+ AT GATTV++T A+ VGI +F TGG+GGVHR + D S+DL L P+ V+SAG+KSILDI TLE LET G+ V Y+T+ FP F+ + + RV A + L L S +V+ P+P + Sbjct: 7 IVVSATVRDALAAGAPVVALESTLIAHGLPRPRNRDVAVELEELARARGVTPATIAVIDGVPRVGLDEPDLRRIAD-DANVIKLSVRDLPVACATGWTGATTVASTALLAARVGIRLFATGGLGGVHRGAGDSFDESADLVTLAAMPITVVSAGVKSILDIGATLERLETLGITVVGYRTSTFPGFYLPHTTYDLDWRVGDAGQVAATMAAADLLGLTSAIVVANPLPTD 235
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_THET2 (Pseudouridine-5'-phosphate glycosidase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=psuG PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.203e-42 Identity = 99/206 (48.06%), Postives = 131/206 (63.59%), Query Frame = 3 Query: 135 VALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVI 752 VALES +++HG+PYP N E A +E VR GA P TIA++ G VGLS EE+E LA G A+K + ++A ++A + TTV+AT+ A + GIPVF TGGIGGVH D S+DL L RTP+ V+S+G K+ILD+ TLE LET GV V Y+T+ PAFF+ S VP RVD+P + AR+ L LG L++ Sbjct: 6 VALESAVLTHGLPYPLNLEVALALEEAVREEGATPKTIALVRGEVRVGLSPEEMEALAAGG--AEKASLWNLAALLAQGRSAGTTVAATVHLAHLHGIPVFATGGIGGVH---PEPYDESADLVALSRTPILVVSSGPKAILDLRATLERLETLGVSVVGYRTDRLPAFFSPDSPFPVPARVDTPMEAARVYLRARALGLGGVLLV 206
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_ANAD2 (Pseudouridine-5'-phosphate glycosidase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=psuG PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.203e-42 Identity = 103/240 (42.92%), Postives = 146/240 (60.83%), Query Frame = 3 Query: 84 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHR--HGE---HTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNM-KLKLGSGLVIGVP----IPRE 773 V+++ EV AL+ G VVALE+++++ G+P P N E A+ A VR GAVPA +A++ G VG LERLA + K + RD+A + A + TTV+AT A++ GI VF TGGIGGVHR GE D+S+DL EL R PV V+SAG K+ILD+ T E LET GV V ++T+E PAF+++ SG + RV+ AR++ ++ L G+++ VP +PRE Sbjct: 5 VRLAEEVRAALAAGGPVVALETSVVAQGLPPPHNLEAARRCAAAVRAAGAVPAAVAVVAGAVVVGADDAALERLADPARRPAKASARDLAALCAAGRDAGTTVAATAAVAALAGIRVFATGGIGGVHRLAPGEPAAGAADVSADLAELARAPVCVVSAGPKAILDLAATAEALETLGVPVLGWRTSELPAFYSDGSGIALEHRVEDAAAAARVLRLHWDALGRREGVLLAVPPPEAVPRE 244 The following BLAST results are available for this feature:
BLAST of CN187741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187741 ID=CN187741; Name=CN187741; organism=Citrus sinensis; type=EST; length=778bpback to top |