CN187741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_GEMAT (Pseudouridine-5'-phosphate glycosidase OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=psuG PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.155e-41 Identity = 97/224 (43.30%), Postives = 135/224 (60.27%), Query Frame = 3 Query: 102 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPRE 773 V EAL G A+VALES++++ G+ P N E A+ + V GA+P AI G P +GL E+LER + +K + RD+ +A +GATTV+AT+ ++ G+ VF TGGIGGVHR + D S+DL EL RTPV V+ AG KSILD+P TLE LET GV V T+E P FF+ ++G ++ R+D PE AR + L S +++ P P + Sbjct: 14 VFEALERGAALVALESSVLAQGLEPPYNREAARRMTEAVTAVGAIPVITAISRGTPTLGLDDEDLERFLQRDG-VRKVSARDLGIAMADGADGATTVAATLALCALGGLEVFATGGIGGVHR--DAPFDESADLIELSRTPVIVVCAGAKSILDLPATLERLETLGVPVVGCGTDELPGFFSLSTGLRLTSRLDRPEQIARAWRAHRALGRESAMLVVQPPPAD 234
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_CORA7 (Pseudouridine-5'-phosphate glycosidase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=psuG PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.746e-39 Identity = 90/230 (39.13%), Postives = 133/230 (57.83%), Query Frame = 3 Query: 84 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPRE 773 ++ S EV ALS+G ++ LES ++SHG+PYP+N E + I+R+NG VPA I + C+G S +++E L K K + RDIA +A GATT SA++ + GI +F T G+GGVHR T+D+S+DL E+ V+SAG+K LDIP+T E LE+ GV V + T+EFPAF+ SG+ + P + A +++ G +I V +E Sbjct: 6 IEYSDEVQNALSNGLPILGLESNVLSHGLPYPRNLEMFNACDEIIRSNGVVPALTFIRDKRICIGASPKDVELLTD-DPKPIKVSARDIALCIAQGKVGATTASASIAICELAGIRIFSTAGLGGVHRDFSETLDVSADLHEISSRKTIVVSAGVKKFLDIPKTSEVLESLGVPVVGFGTSEFPAFYCRKSGAFLESFSQDPIEIATAAATHIETVGPGGFLILVAPSKE 234
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_THEMA (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga maritima GN=psuG PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.615e-38 Identity = 88/225 (39.11%), Postives = 133/225 (59.11%), Query Frame = 3 Query: 102 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREH 776 + + G VV +E+T+ HG+P + E + + I R G A I IL+G G+S EELE + + G A K R+I VVA N ATTVSAT+F + +GI V VTGG GGVH +D+S DLTE+ + ++S+GIKSILD+ T E LET + + ++TNEFP FF+ SG +VP R+++ E+ ++ + +++L L++ P+P E+ Sbjct: 3 IESRIEKGKPVVGMETTVFVHGLPRKEAIELFRRAKEISREKGFQLAVIGILKGKIVAGMSEEELEAMMREG--ADKVGTREIPIVVAEGKNAATTVSATIFLSRRIGIEVVVTGGTGGVH---PGRVDVSQDLTEMSSSRAVLVSSGIKSILDVEATFEMLETLEIPLVGFRTNEFPLFFSRKSGRRVP-RIENVEEVLKIYESMKEMELEKTLMVLNPVPEEY 221
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_THELT (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=psuG PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.334e-38 Identity = 93/215 (43.26%), Postives = 129/215 (60.00%), Query Frame = 3 Query: 132 VVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREH 776 ++ALEST+I+HG+P+P N +TA E+E + G TI I+ G VGLS EE+ ++A K +I +A + ATTVSATM A + I VF TGGIGGVH+ + D+S DL EL RT + V+SAG KSILD+ T+E LET + V YKT+E PAF+ +++ + RVDS E+ A + K L +++ PIP EH Sbjct: 4 ILALESTVIAHGLPFPINIDTAVELEELAAETGCSAKTIGIIAGQIKVGLSREEIVQIASR-KDVLKIGTAEIPFALAKKMWAATTVSATMRIAHLNNIKVFATGGIGGVHKIDQ--WDVSQDLAELSRTRMIVVSAGPKSILDLRSTVEMLETFQITVVGYKTDELPAFYCKSTSIHIN-RVDSFEEIASIFLFKEKFNLPGAVLVFNPIPDEH 214
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_THESQ (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga sp. (strain RQ2) GN=psuG PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.634e-37 Identity = 88/225 (39.11%), Postives = 133/225 (59.11%), Query Frame = 3 Query: 102 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREH 776 + + G VV +E+T+ HG+P + E + + I R G A I IL+G G+S EELE + + G A K R+I VVA N ATTVSAT+F + +GI V VTGG GGVH +D+S DLTE+ + ++S+GIKSILD+ T E LET + + ++T+EFP FF+ SG +VP RV++ E+ ++ + +++L L++ P+P E+ Sbjct: 3 IESRIEKGKPVVGMETTVFVHGLPRKEAIELFRRAKEISREKGFQLAVIGILKGKIVAGMSEEELEAMMREG--ADKVGTREIPIVVAEGKNAATTVSATIFLSRRIGIEVVVTGGTGGVH---PGRVDVSQDLTEMSSSRAILVSSGIKSILDVEATFEMLETLEIPLIGFRTDEFPLFFSRKSGRRVP-RVENVEEVLKIYETMKEIELEKTLMVLNPVPEEY 221
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_THEP1 (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=psuG PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.640e-37 Identity = 88/225 (39.11%), Postives = 131/225 (58.22%), Query Frame = 3 Query: 102 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREH 776 + + G+ VV +E+T+ HG+P + E + + I R G I IL+G VG+S EELE + + G A K R+I VA N ATTVSAT+F + +GI V VTGG GGVH +D+S DLTE+ + ++S+GIKSILD+ T E LET + + +KT+EFP FF+ SG +VP RV+S E+ ++ + ++ L++ P+P E+ Sbjct: 3 IESRIEKGNPVVGMETTVFVHGLPRKEAIELFRRAKEISREKGFQLVVIGILKGKIIVGMSEEELETMMREG--ADKIGTREIPIAVAKGKNAATTVSATIFLSRRIGIEVVVTGGTGGVH---PGRVDVSQDLTEMASSRTILVSSGIKSILDVEATFEMLETLEIPLVGFKTDEFPLFFSRKSGRRVP-RVESVEEVLKIYETMREIGFEKTLMVLNPVPEEY 221
BLAST of CN187741 vs. ExPASy Swiss-Prot
Match: PSUG_THENN (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=psuG PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.691e-34 Identity = 87/225 (38.67%), Postives = 127/225 (56.44%), Query Frame = 3 Query: 102 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVISAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGLVIGVPIPREH 776 V L V +E+T+ HG+P + E ++ + I G A + +L+G +G++ +EL + GS +K R+I +A N ATTVSAT+F GI V VTGG GGVH G +DIS DLTE+ + + ++S+GIKSILD+ T E LET + V + T+EFP FF+ SG KV RV++ E+ R+ +LKL L++ P+P EH Sbjct: 3 VENRLEKEKPAVGMETTVFVHGLPRKEAIELFRKAKKISEEMGFQLAVVGVLKGKIILGMNEDELTIMMNEGS--EKIGTREIPIALAKGMNAATTVSATIFLCKRFGIDVVVTGGTGGVHPGG---VDISQDLTEMASSRIILVSSGIKSILDVDATFEMLETLEIPVVGFMTDEFPLFFSRKSGKKVK-RVENVEEILRIYRTMEELKLEKTLMVLNPVPEEH 221 The following BLAST results are available for this feature:
BLAST of CN187741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187741 ID=CN187741; Name=CN187741; organism=Citrus sinensis; type=EST; length=778bpback to top |