CN187740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 256.914 bits (655), Expect = 7.984e-68 Identity = 125/218 (57.34%), Postives = 163/218 (74.77%), Query Frame = 1 Query: 88 DDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEED-----GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 D ++ +++ ++ ++LLDNEIR+ + ELQR + E + LPYLV N+VE+++MN ++ E G N++LD+ GK V+KTS+RQT+FLP+VGLVDPDKLKP DLVGVNKDSYLILDTLPSE+DSRVKAMEVDEKPTE Y+D+GGL+KQI+ELVEAIVLPM ++F+ +G+R PKG L+YGPPGTGKTL+ARACA Sbjct: 19 DQEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEKIKNNRQLPYLVANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQTVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACA 236
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.034e-67 Identity = 126/212 (59.43%), Postives = 159/212 (75.00%), Query Frame = 1 Query: 91 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 D++ MTAD++ R ++LL+NE +VL+ E +LE+DS LP+LV N+VEI++M + E + KCVV+K STRQTIFL G+VD DKL+PGDLVG+NKDSY+ILDTLP EYDSRVKAME+DEKPTE+Y+DIGGL+KQIQELVEA+VLPMTHKERF+ +G++PPKGVL+YGPPGTGKTL+ARACA Sbjct: 24 DEIFQMTADEVNRKAKLLENETKVLRSEHISKHLEMDSIQKRIKENNDKLQVNTQLPHLVANVVEIIDMVLDGETQPS------------KCVVVKASTRQTIFLAYPGIVDVDKLRPGDLVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACA 223
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.759e-67 Identity = 123/213 (57.75%), Postives = 161/213 (75.59%), Query Frame = 1 Query: 88 DDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 + ++ + D++ +RLL+N+I+V+K E QR E + LPYLVGN+VEIL+M P++ ++ AN + ++ R GK V+KTSTRQTIFLP++GLV+P++L PGDL+GVNKDSYLI+D LPSEYDSRVKAMEVDEKPTE Y+DIGGL KQI+EL EAIVLPM ++F+KLGV+PPKG L++GPPGTGKTL+ARACA Sbjct: 28 EQEILAAGIDELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILDMQPDEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACA 240
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.320e-41 Identity = 88/199 (44.22%), Postives = 123/199 (61.81%), Query Frame = 1 Query: 136 RLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV--DEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 R+L++E R+L+ + ++ + LPYLVGN+VE+L+ E G V+ STR + +LP+ GL+ +L+PGDLV ++KD+ ++ + LP +YD +V M + D KP E Y DIGGLE+QI+EL EAIVL +TH ERF+KL ++PPKGVL+YGPPGTGKTLMARACA Sbjct: 26 RMLNSETRILQSRVNTIKHDISTKNASIAENMERIRLNKQLPYLVGNVVEVLD-------EHSG--------------VVNASTRMSSYLPITGLIPNSELRPGDLVALHKDTNIVFEKLPPDYDMKVGGMVLKSDAKPDETYEDIGGLERQIEELNEAIVLSLTHPERFEKLNIKPPKGVLMYGPPGTGKTLMARACA 203
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.775e-34 Identity = 85/221 (38.46%), Postives = 124/221 (56.11%), Query Frame = 1 Query: 70 EDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXL--PYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 ++ NL++D L +++ +R+ + E R+LK EL++ LE ++ P +VG +V D +RK VV+K+ST + + V V+PD L PG V +N+ + ++D LP D R KAMEVDE+P Y DIGGLEKQ+QE+ E + LP+ H E F+K+G+ PPKG+LLYGPPGTGKTL+A+A A Sbjct: 30 DNSNLKNDLLK----EELQEKARIAELESRILKLELEKKELERENLQLMKENEILRRELDRMRVPPLIVGTVV------------------DKVGERK---VVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVA 225
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.805e-31 Identity = 75/194 (38.66%), Postives = 109/194 (56.19%), Query Frame = 1 Query: 145 DNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 D EIR+LK++++ E S PY+ ++E+++ N VV+K+ST + + V VD LKPG +V +N I+D LP YD VKAMEV+E+P + D+GGLE+QI+E+ EA+VLP+ + F++LG+ PPKGVLL+GPPGTGKTL+A+A A Sbjct: 22 DVEIRILKDKVRSLTKEKISLQKELEYYKNEITKLLSPPYIEAVVLEVIDDNR---------------------VVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVA 194
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.874e-30 Identity = 79/200 (39.50%), Postives = 109/200 (54.50%), Query Frame = 1 Query: 127 RASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 R + L+ E+ + ++E EL P +VG + EIL+ DG V++K+ST V VD ++L+PG V +N+ S ++D LPSE DSRV AMEVDE P Y+DIGGL++QI+E+ E + P+ E F+K+GV PPKGVLLYGPPGTGKTL+A+A A Sbjct: 56 RRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEILD---------DGR------------VIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVA 234
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29 Identity = 61/120 (50.83%), Postives = 85/120 (70.83%), Query Frame = 1 Query: 367 VVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 V++++S + L+DPD LKPG +N+ S I+D LP+ YD+++ ME+ E P E Y +IGGLE QI+E+ EA+ LP+T + F+K+G+ PPKGVLLYGPPGTGKTL+ARA A Sbjct: 89 VIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVA 208
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29 Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 1 Query: 367 VVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 VV+++S + V V+P LK G +N+ S I++ LPS YDS+V ME+ + PTE Y DIGGLEKQI E+ EA+ LPMT + F+K+G+ PPKGVLLYGPPGTGKTL+A+A A Sbjct: 89 VVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVA 208
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.627e-28 Identity = 79/220 (35.91%), Postives = 114/220 (51.82%), Query Frame = 1 Query: 79 NLEDDQLSSMTADDIV----RASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 ++E+ + DD V R R L+ ++R L+ + +R EL P GN++E+L D +R +++ + + ++ DKLKPG V +++ + I++ LPSE D V EV E+P YNDIGGLEKQ+QEL EAI LP+ H E F+++G+ PPKGVLLYGPPG GKTLMA+A A Sbjct: 2 SIENTDVHPEGYDDYVTFLKRRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQP-------PAFAGNVIEVL-----------------DDER----AIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVA 193 The following BLAST results are available for this feature:
BLAST of CN187740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 159
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187740 ID=CN187740; Name=CN187740; organism=Citrus sinensis; type=EST; length=728bpback to top |