CN187740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.077e-28 Identity = 62/134 (46.27%), Postives = 89/134 (66.42%), Query Frame = 1 Query: 325 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 G +D ++RK V+K+ST + + VDPD + PG V +N+ + I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ PPKGVLLYGPPGTGKTL+A+A A Sbjct: 73 GTILDRVNERKA---VVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVA 203
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.378e-27 Identity = 73/197 (37.06%), Postives = 105/197 (53.30%), Query Frame = 1 Query: 136 RLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 R L+ ++R L+ + +R EL P G ++E+L+ ED A +++ + + ++ + LKPG V +++ + I++ LPSE D V EV E+PT YNDIGGL+KQ+QEL EAI LP+ H E F+K+G+ PPKGVLLYGPPG GKTLMA+A A Sbjct: 26 RQLELQVRTLEADKERLERELSRLRMEMSRLRQP-------PAFAGTLIELLD---EDRA------------------IVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKALA 194
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.350e-27 Identity = 61/134 (45.52%), Postives = 89/134 (66.42%), Query Frame = 1 Query: 325 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 G +D ++RK V+K+ST + + VDP+ + PG V +N+ + I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ PPKGVLLYGPPGTGKTL+A+A A Sbjct: 73 GTILDKVNERKA---VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVA 203
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.350e-27 Identity = 61/134 (45.52%), Postives = 89/134 (66.42%), Query Frame = 1 Query: 325 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 G +D ++RK V+K+ST + + VDP+ + PG V +N+ + I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ PPKGVLLYGPPGTGKTL+A+A A Sbjct: 73 GTILDKVNERKA---VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVA 203
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.350e-27 Identity = 61/134 (45.52%), Postives = 89/134 (66.42%), Query Frame = 1 Query: 325 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 G +D ++RK V+K+ST + + VDP+ + PG V +N+ + I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ PPKGVLLYGPPGTGKTL+A+A A Sbjct: 73 GTILDRVNERKA---VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVA 203
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.009e-27 Identity = 58/120 (48.33%), Postives = 82/120 (68.33%), Query Frame = 1 Query: 367 VVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 V +K++T + +D +L+PG V +N+ ++ I+D LPSE D V MEV+EKP Y IGGLE+Q++E+ E + LP+ E F+K+G+ PPKGVLLYGPPGTGKTL+A+A A Sbjct: 87 VAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVA 206
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 5.235e-27 Identity = 70/194 (36.08%), Postives = 106/194 (54.64%), Query Frame = 1 Query: 145 DNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 D +R+L+E+++ EL+ PY+ +++IL DG V++++S+ + + V +D KLKPG LV + + I++ LP D+ VK+ EV EKP Y+DIGGL +QI E+ E I LP+ + E F+++G+ PPKGVLLYGPPGTGKTL+A+A A Sbjct: 17 DPIVRLLEEKIESLTKELEKLRQDLNWYKGELEKLLAPPYIEAIVLDILP---------DGK------------VIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQRGSTIVEVLPEREDAYVKSFEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVA 189
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.166e-26 Identity = 71/200 (35.50%), Postives = 104/200 (52.00%), Query Frame = 1 Query: 127 RASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 R R L+ ++R L+ + +R EL P G ++E+L+ +D A +++ + + ++ DKLKPG V +++ + I++ LP+E D V EV EKP Y DIGGLE+Q+ EL EA+ LP+ H E F+K+G+ PPKGVLLYGPPG GKTLMA+A A Sbjct: 22 RRIRQLELQVRTLEADKERLERELSRLRTEMSRLRQP-------PAFAGTVIEVLD---DDRA------------------IVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAVA 193
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.166e-26 Identity = 69/236 (29.24%), Postives = 118/236 (50.00%), Query Frame = 1 Query: 52 MATAMVEDPNLEDD-----------QLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 MATAMV DP + + S DD+ + L ++ ++ + + EL + +P ++G +E+++ N ++ ++T ++ ++ ++ + LKP VG+++ S ++D LP E DS + + EKP YNDIGG + Q QE+ EA+ LP+TH E ++++G+ PP+GVLLYGPPGTGKT++A+A A Sbjct: 1 MATAMVLDPKPAEKLPATRPETSITDVPSDGEDDLYARLKSLQRQLEFIEIQEEYVKDELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNN---------------------AIVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVA 215
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.523e-26 Identity = 73/212 (34.43%), Postives = 116/212 (54.72%), Query Frame = 1 Query: 91 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 D + ++ D V+ RLL+ +I+ L+ E++ EL+ + P L+ +V L++ P+ V++++S+ + + V +D +KPG V +N+ IL+ LP + D VK ME+ EKP Y++IGGLE+QI+EL E + LP+ E F+++GV PPKGVLLYGPPGTGKT++A+A A Sbjct: 6 DTIRDASSSDEVQLVRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLS--------PPLIEAVV--LDVLPDGR------------------VLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVA 189 The following BLAST results are available for this feature:
BLAST of CN187740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 159
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187740 ID=CN187740; Name=CN187740; organism=Citrus sinensis; type=EST; length=728bpback to top |