CN187740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 107.842 bits (268), Expect = 5.990e-23 Identity = 52/102 (50.98%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 421 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 5.990e-23 Identity = 52/102 (50.98%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 421 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 5.990e-23 Identity = 52/102 (50.98%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 421 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 5.990e-23 Identity = 52/102 (50.98%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 421 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.823e-23 Identity = 49/119 (41.18%), Postives = 80/119 (67.23%), Query Frame = 1 Query: 370 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 ++ ++T ++ +V +D + LKP V ++K S ++D LP DS + + D+KP Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+GVL+YGPPG GKT++A+A A Sbjct: 102 IVASTTGSNYYVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVA 220
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 421 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 +D ++KP V + DSY ++ LP++ D V M V++ P Y +GGLEKQI+E+ E I LP+ H E F+ LG+ PKG+LLYGPPGTGKTL+ARA A Sbjct: 99 IDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVA 200
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 52/102 (50.98%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 421 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 +D K+ P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A Sbjct: 115 IDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22 Identity = 51/102 (50.00%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 421 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 V P ++ G VG +++ Y I LP + D V M+V+EKP Y D+GG ++QI+ L E + LP+ ERF KLG+ PPKG++LYGPPGTGKTL ARA A Sbjct: 133 VSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVA 234
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.973e-22 Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 409 VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 VVGL V P ++ G VGV++ Y I LP D V M V+EKP Y+D+GG + QI++L E + LP+ ERF LG+ PPKG+LLYGPPGTGKTL ARA A Sbjct: 156 VVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVA 264
BLAST of CN187740 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.883e-22 Identity = 51/99 (51.52%), Postives = 71/99 (71.72%), Query Frame = 1 Query: 430 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 726 D L+ GD V +N DS+ + L E D+R +AMEVDE P+ Y DIGGL+ Q++E+ EA+ P+ + E+F +GV PP GVLL+GPPGTGKT++A+A A Sbjct: 110 DTLEVGDRVAIN-DSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVA 207 The following BLAST results are available for this feature:
BLAST of CN187740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 159
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187740 ID=CN187740; Name=CN187740; organism=Citrus sinensis; type=EST; length=728bpback to top |