CX675506

Overview
NameCX675506
Unique NameCX675506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_METBF (D-tyrosyl-tRNA(Tyr) deacylase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=dtdA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.971e-15
Identity = 74/249 (29.72%), Postives = 115/249 (46.18%), Query Frame = 1
Query:   13 ILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQ----EVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRL-LKKIALSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMED 741
            I I+ +  D AS N    LL +  WK     ++   S   +    + R++   ++ + +D LD++ + A G     +IF SKH +     +LTVH  G P     + +  GG P   A  +P     + + +K++A    L  ++++TLE THHGP   S P+++ EIGSTE  WK  +A +V A  I          AV        K  V +G GGGHYA R   ++ +  +   H    Y L   D
Sbjct:   25 ITIICSAPDLASQNIKTQLLNLIEWKLLEIPENSEFSAARESQDGKFRLVDIEETHVFQDGLDRKLENA-GLPASLIIFASKHRSKEEISSLTVHCTGNP----SDDVRLGGCPKSLAVSSPAAMKSILVEMKRLAEQKGL--KYDVTLEVTHHGPTELSVPSLYAEIGSTEVQWKDPEAGEVAAKAIL---------AV-----SLVKVPVAVGFGGGHYAMRQTKLLFETGISFGHNFPKYKLEFVD 252          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_HALWD (D-tyrosyl-tRNA(Tyr) deacylase OS=Haloquadratum walsbyi (strain DSM 16790) GN=dtdA PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.509e-14
Identity = 68/242 (28.10%), Postives = 119/242 (49.17%), Query Frame = 1
Query:   10 VILIVATTIDPASINPANALLAMPGWKPG-PFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSL 729
            +I +V ++ D AS+  ++ L  +  W+       D+ + + + E+R +  ++  +E ++  + +   T +++    FLS+H+  +  P LT H  G        P   GG PG  A   P I   L      A       ++++ +E THHGP T   P++F+E+GS++  W   D A  +A  I   L L G DA  N     + ++ ++G GGGHYAPR   I+ + D  V H+ + ++L
Sbjct:    1 MIGLVVSSADTASVTISDQLHELVEWESHRDAAGDEYEQYDDFEMRTI--DEWHLEAENASELFS-TTPQIIA---FLSRHSGDTG-PLLTTHFTG-----NFGPAEYGGEPGSFAQACPMIQQTLLE----AFDRYAPSKYDVGIECTHHGPTTVGAPSLFVELGSSKAEWNDPDGAHAVAQAI---LELSGEDAPAN----VETDRTVVGFGGGHYAPRFERIIRETDWVVGHIGADWAL 219          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_METTP (D-tyrosyl-tRNA(Tyr) deacylase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=dtdA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.971e-14
Identity = 72/247 (29.15%), Postives = 113/247 (45.75%), Query Frame = 1
Query:   13 ILIVATTIDPASINPANALLAMPGWKPGP---FFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKI--ALSHNLVPEFEITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPM 735
            ++I+ ++ DPAS N A+ LL +  W       F +      +  E+  L++ + +++   L  R           +IF S+H +    P L  H  GV  +REG    +  RP   A            LKK+  AL  +    F ++ E THHGPV  + P++F EIGS E++W    A   +A  I +         + ++   +D+  VLLGIGGGHY  R  +++L   V   H+ S Y   M
Sbjct:    4 VVIICSSSDPASSNIASRLLELAEWDEEGTLRFHRSYCMLCIEGELVGLRNLEDMLDRIGLSPRL----------IIFASRHISKEAVPWLGGHFTGV--VREGSF--ELSRPAPYA------------LKKLLMALQRHAPSTFRLSAEATHHGPVDLRTPSLFAEIGSCEQHWIDPAAGAAVARAILE---------LESYEAHADET-VLLGIGGGHYVQRQTELILSRPVAFGHMFSKYQASM 214          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_METVS (D-tyrosyl-tRNA(Tyr) deacylase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=dtdA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.361e-14
Identity = 55/167 (32.93%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  232 IFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPE-----FEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELG-LGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHL 711
            +FLSKH + S +P LTVH  G  +L +      GG P      NP       LL +    +N + E     FE++ E  HHGP   + P+ F+EIGS+E  W+  DAA++I   + D +  +  GD         ++ + ++G+GGGHY+P+   + LK++  V +L
Sbjct:   50 VFLSKHRSESKKPTLTVHTPG--NLTKDNS--HGGNPEEICHCNPVFNT---LLLQNIDKYNSMEEYQELGFEVSFEVLHHGPTDLNAPSAFVEIGSSEMQWQINDAAEIITNALIDTINAISYGDF--------EEKEKIIGLGGGHYSPKFTKLALKNEYHVGYL 201          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_METPE (D-tyrosyl-tRNA(Tyr) deacylase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=dtdA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.734e-14
Identity = 75/241 (31.12%), Postives = 112/241 (46.47%), Query Frame = 1
Query:    7 MVILIVATTIDPASIN---PANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPE-FEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLL 714
            M I +V + +DPA +        LLA P ++         +  ++ E   L+ +  +I ++ +D      TG     +IFLS+HT+    P LTVHP G P    GE L  GG  G  AP  P    W++ + +  +   LVP+ ++ + E THHGP T S P+ F+EIGST+  W    A   +A  +   L     D +            L+G GG HYAPR   + L+      H+L
Sbjct:    1 MKITLVNSRLDPAGVTIREQIQVLLADPEYQ---------REGIDWEF--LEIDGRLIHQERID------TGLNSDLLIFLSRHTSRRPVPVLTVHPTGNP----GEAL-LGGEAGSFAPAAP---GWMQAVLQNLV--RLVPDGYQASYEVTHHGPTTLSTPSFFVEIGSTDHEWSDPVAGAAVAEAV---LTAAPVDPIS-----------LIGFGGTHYAPRETAVALETRGAFGHIL 200          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_HALLT (D-tyrosyl-tRNA(Tyr) deacylase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=dtdA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.488e-14
Identity = 63/194 (32.47%), Postives = 96/194 (49.48%), Query Frame = 1
Query:  178 DDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPE-FEITLEGTHHGPV-TSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDA-----VGNWNRESDKN---KVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSL 729
            D+ +    + T E    + F+S+H+  +    LT H  G        P P GG P   A   P  G   R+++ +A      PE +++ +E THHGP  TS P++F+E+GS E  W   DAA+ +A  + D   L G DA      G    E D +   + ++G GGGHYAPR   IV + +  V H+ + ++L
Sbjct:   74 DETNDAASDDTDETPEFLAFVSRHSGETGE-LLTAHVTG-----NFGPAPYGGEPDTLARAAP--GAEKRVVEALAAH---APEGYDVGIECTHHGPTDTSVPSLFVELGSDEPQWTDADAARAVARAVLD---LRGTDADLVTDAGETTDEIDDDPHPRHVVGFGGGHYAPRFTRIVRETEWAVGHVGADWAL 253          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_CALMQ (D-tyrosyl-tRNA(Tyr) deacylase OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=dtdA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.780e-14
Identity = 63/243 (25.93%), Postives = 110/243 (45.27%), Query Frame = 1
Query:    7 MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRE-SDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLP 732
            M I ++ + +D ASI   + L  M  +K     + +   + +     L  +K I+  D+ D+ W       +  ++FLS+H   + +P +T H  G         +  GG+PG  A   PR+     L ++       +  + +TLE THHGP   KP +F+EIGST   W+   A + +A L++D L         N ++  +D     + IG  HY    ++ ++  +  V H++  Y  P
Sbjct:    1 MKIGLIVSRVDEASIGIWSMLKGMVKFK-----EINTNEYSSDLALALVSDKDIVYVDEADE-WARVND--IDLLLFLSRHEMKNPKPLITFHTPG----NWTNDVELGGKPGQVAISEPRV--LTNLFREAYRRIGELNGYSVTLEATHHGPFVDKPVVFVEIGSTSNEWRDPKAQEFLASLVFDLL--------NNTDKYINDGKDAAVSIGDLHYTTL-VNHIINGEYDVGHMVPKYIKP 220          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_THEAC (D-tyrosyl-tRNA(Tyr) deacylase OS=Thermoplasma acidophilum GN=dtdA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.277e-13
Identity = 67/248 (27.02%), Postives = 112/248 (45.16%), Query Frame = 1
Query:   16 LIVATTIDPASINPANALLAMPGW--KPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRI--GPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWN-RESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDP 744
            LIVA+  DPAS+   + L     +  K G     D    + ++ R + H+ S+  + D               ++ LS+H++ ++  +LT HP G      G     GG+P       PR+  G   R+++  + S      FE+T E THHGP+   P  ++EIG+TE  W   +A                 D+V N + R+ D     +G+GGGHYAP+  +   ++ V + H++S +     +P
Sbjct:    3 LIVASRSDPASVRMLDYLTEKYTFSEKGGVLNHGDFDLVIIED-RHIFHDMSLSGKYDY--------------LVVLSRHSSAADVKSLTAHPTG----NFGPSADLGGKPRTINISCPRVMSGTLRRMMESYSGSR-----FEVTFEATHHGPIFDIPNYYVEIGTTENEWNDPEALSTTV------------DSVMNPDVRDYD---AFVGVGGGHYAPKIKEYFRENSVNIGHIISKHDHDALEP 211          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_THEVO (D-tyrosyl-tRNA(Tyr) deacylase OS=Thermoplasma volcanium GN=dtdA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.668e-13
Identity = 62/238 (26.05%), Postives = 111/238 (46.64%), Query Frame = 1
Query:   16 LIVATTIDPASINPANALLAMPGWKP--GPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRI--GPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLS 717
            +++A+  DPAS+   + L      K   G  F  D + FV ++       + I  + +L   ++ A        + LS+H++ ++  +LT HP G      G     GGRP       P+   G   ++L+  + +     +F++T E THHGP+   P  ++EIG+TE  W   DA +               DAV N + +   N   + +GGGHYAP+ ++   ++++ + H++S
Sbjct:    3 VLIASKSDPASMQMLSYLEDNYDIKENSGRRFVKDFEIFVIED-------RHIFHDMNLGNNYEYA--------VVLSRHSSAADIKSLTAHPTG----NFGPKADLGGRPKTINVSCPKYMSGTLRQMLESYSGT-----KFQVTFEATHHGPIFDLPNYYVEIGTTENEWTDDDAKKTAV------------DAVINPDAKDFPN--FVAVGGGHYAPKILEYFRRNEINIGHIIS 202          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_METHJ (D-tyrosyl-tRNA(Tyr) deacylase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=dtdA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13
Identity = 61/233 (26.18%), Postives = 96/233 (41.20%), Query Frame = 1
Query:   40 PASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPE-FEITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLP 732
            P   +P   L++      G    +++ SF+  + R   H +    E+ L      +       ++FLS+H +   RP LTVH  G            GGRP    P     G    L+ ++ +     PE +E+  E THHGP     P+ F+E+GSTE+ W  + AA+ +A  + D L +     +            L G GG HYA R  +I         H++    +P
Sbjct:    3 PKEQSPTTLLISSRKDPAGSLIHEELYSFLEDDKRAHSHIRHWHAEERLIYLDGPSLPHDADRILFLSRHASERPRPVLTVHVTG-----NFGSADYGGRPNTLTPA--ATGLMHALINRLIIH---APEGYEVMYEATHHGPTDIPLPSCFIELGSTEKEWNDRIAARAVAQAVLDALLMDTSSVI-----------PLAGFGGTHYAQRQTEITKLTRGGFGHIMPTRDIP 214          
The following BLAST results are available for this feature:
BLAST of CX675506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
DTDA_METBF3.971e-1529.72D-tyrosyl-tRNA(Tyr) deacylase OS=Methanosarcina ba... [more]
DTDA_HALWD1.509e-1428.10D-tyrosyl-tRNA(Tyr) deacylase OS=Haloquadratum wal... [more]
DTDA_METTP1.971e-1429.15D-tyrosyl-tRNA(Tyr) deacylase OS=Methanosaeta ther... [more]
DTDA_METVS3.361e-1432.93D-tyrosyl-tRNA(Tyr) deacylase OS=Methanococcus van... [more]
DTDA_METPE5.734e-1431.12D-tyrosyl-tRNA(Tyr) deacylase OS=Methanosphaerula ... [more]
DTDA_HALLT7.488e-1432.47D-tyrosyl-tRNA(Tyr) deacylase OS=Halorubrum lacusp... [more]
DTDA_CALMQ9.780e-1425.93D-tyrosyl-tRNA(Tyr) deacylase OS=Caldivirga maquil... [more]
DTDA_THEAC1.277e-1327.02D-tyrosyl-tRNA(Tyr) deacylase OS=Thermoplasma acid... [more]
DTDA_THEVO1.668e-1326.05D-tyrosyl-tRNA(Tyr) deacylase OS=Thermoplasma volc... [more]
DTDA_METHJ2.846e-1326.18D-tyrosyl-tRNA(Tyr) deacylase OS=Methanospirillum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62F11_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62F11-L22-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675506 ID=CX675506; Name=CX675506; organism=Citrus sinensis; type=EST; length=780bp
CGCGAAATGGTGATCCTAATAGTAGCCACAACGATCGATCCGGCCTCCAT
TAACCCGGCCAACGCCCTTTTGGCCATGCCCGGCTGGAAACCCGGTCCCT
TCTTCCAGGACGATATGAAGAGCTTCGTGAATCAAGAAGTGAGAGTGTTA
CAACACAACAAAAGCATCATAGAAGAGGACGATCTAGACAAGCGTTGGCA
GGAGGCTACCGGCGAAGTCGTTGGCGAAGTTATATTTTTGAGCAAACACA
CTGCCGTTTCGAATCGCCCCGCGCTTACAGTTCATCCAATCGGAGTGCCT
CATTTGCGTGAAGGAGAGCCGCTGCCACAAGGTGGGAGGCCAGGCTGGGC
CGCGCCGCCTAATCCTAGGATAGGCCCGTGGCTCAGACTTTTAAAGAAAA
TTGCTCTCTCTCATAATTTAGTTCCTGAATTTGAGATTACATTAGAGGGT
ACTCACCATGGACCTGTGACTAGTAAGCCAACTATGTTCCTAGAGATTGG
TAGTACAGAAGAATACTGGAAGAGACAGGACGCTGCTCAAGTCATTGCTC
TATTAATTTGGGATGAACTTGGACTTGGAGGAGGCGATGCTGTAGGAAAC
TGGAATAGGGAGAGTGACAAGAACAAGGTTCTTCTTGGAATCGGAGGAGG
ACATTATGCACCTCGGCATATGGACATAGTTCTGAAAGATGATGTTTGGG
TAGCTCACCTACTTTCTGGATATTCCTTGCCTATGGAAGATCCAAGCCAG
TCAAAAGTGGATTCAGAATCGAAAGAAATT
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