CX675506

Overview
NameCX675506
Unique NameCX675506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_METMJ (D-tyrosyl-tRNA(Tyr) deacylase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=dtdA PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 8.279e-13
Identity = 78/253 (30.83%), Postives = 107/253 (42.29%), Query Frame = 1
Query:    7 MVILIVATTIDPASINPAN---ALLAMPG-WKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLR-LLKKIALSHNLVPE-FEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDP 744
            M I ++ +  D   +N  N    LLA  G W   P  +    +F     R++ H   I EE D D             ++F+S+H +V   PALTVH  G     EG  L  GG PG  AP  P    W+  +L  +A      PE + ++ E THHGP   S P++F+EIGST   W    A + +A  I                 E  +   LLG GG HYA R  +I L       H++    +   DP
Sbjct:    1 MRIALINSQQDVGGVNIKNHLQTLLAAGGRW---PLAEQHELTFYEVAGRLI-HQDRIDEEVDADL------------ILFISRHASVHPTPALTVHVTG---NYEGADL--GGEPGRLAPAAP---AWMHAILGNLAAR---APEGYRVSYEVTHHGPTALSTPSLFVEIGSTATEWADPAAGRAVAESI--------------LAAEPQETIDLLGFGGTHYAVRQTEIALSSRGAFGHMVPTRQIGAVDP 212          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_SULAC (D-tyrosyl-tRNA(Tyr) deacylase OS=Sulfolobus acidocaldarius GN=dtdA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.412e-12
Identity = 61/202 (30.20%), Postives = 97/202 (48.02%), Query Frame = 1
Query:  127 VNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSL 729
            V + ++ L +    I+ED++D R++         ++  SKH + S  PALTVH  G P  +       GG P       PR+     + ++I   + L    + TLE THHGP   K P +F+E+GS   YW  +   +++  L+  E  L   D V +   E    ++++G GG HYAP      L + V + H++S Y L
Sbjct:   13 VGETIKKLGYKFEEIDEDEVDFRFERGDA-----IVIFSKHQSSSKTPALTVHYPGNPSSQ-----VLGGEPEKLGVAFPRL--LTAIFREI---NKLDIPVQKTLEATHHGPTYQKVPIVFVEVGSDPTYWGNE---KIVKSLV--ESTLSAIDKVSSLYCE----EIIVGFGGPHYAPYFSK--LGEKVCIGHIISKYYL 188          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_METB6 (D-tyrosyl-tRNA(Tyr) deacylase OS=Methanoregula boonei (strain 6A8) GN=dtdA PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.412e-12
Identity = 62/169 (36.69%), Postives = 79/169 (46.75%), Query Frame = 1
Query:  220 VGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP-RIGPWLRLLKKIALSHNLVPE-FEITLEGTHHGPV-TSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLS 717
            V  VIFLS+H++V+  P LTVH  G     E      GG P   AP  P  +   LR L +        PE + ++ E THHGP   S P+ F+EIGSTE+ W    A + +A  +   LG     AV            L+GIGG HYAPR   I L       H+ S
Sbjct:   58 VNLVIFLSRHSSVNPVPVLTVHATGNFGAAE-----LGGSPRTLAPAAPAMMQATLRALARYC------PEGYRVSYEVTHHGPTGLSHPSFFVEIGSTEKEWVDPVAGRAVAEAV---LGADPAGAV-----------PLIGIGGTHYAPRETAIALSSRGAFGHIAS 201          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_PICTO (D-tyrosyl-tRNA(Tyr) deacylase OS=Picrophilus torridus GN=dtdA PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.844e-12
Identity = 60/239 (25.10%), Postives = 108/239 (45.19%), Query Frame = 1
Query:   16 LIVATTIDPASINPANALLAMPGWK---PGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGY 723
            LI+A+ +D AS+  A  ++ +  +       + +D  K     ++ +  HN   ++ D L               IFLS+H++ +   +LTVH IG  + R+ E      +   +AP    +   LR +K++         + IT E THHGP T   + F+EIG++ E W      +++A  + +              +   + +  +GIGGGHYAP+  D    +D+ + H++  Y
Sbjct:    3 LIIASRMDEASMLMAEKIIDLYDFNRLNENEYQKDGFKLMFIDDLHIY-HNMEKLDFDTL---------------IFLSRHSSSAGVKSLTVHSIG--NYRKAELGGYDNKTVLSAPYE--MSSSLRSIKELYNDDG----YNITFEATHHGPYTKNRSYFIEIGTSGEDWHNDKILEIMARSVIE--------------KNVKRFRSGIGIGGGHYAPKISDYFFNNDINIGHIIPKY 203          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_CENSY (D-tyrosyl-tRNA(Tyr) deacylase OS=Cenarchaeum symbiosum GN=dtdA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12
Identity = 57/204 (27.94%), Postives = 94/204 (46.08%), Query Frame = 1
Query:  166 IIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPV-TSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDPSQSKVDSESK 774
            II+   +   W     E  G V FLS+H A S + ALT H  G  +  E +    GG     A P P  G   R +++++        F+IT+E THHGP    KP++F+E+G+TE+ W  +     +A L+ +               + +K   ++ +GG HY  +  D++LK +         Y+L    P ++ V+ + K
Sbjct:   40 IIDSPAISADWIGGEYEYDGYV-FLSRHGAESGKLALTCHSTG--NFAEAQ---FGGSDREVAIPYP--GFQRRYMRRLSERREKFNGFDITIEATHHGPTGLDKPSIFVEVGTTEKQWNDKGLCGAVAELVRETA-----------EEQDEKTPFVICVGGTHYPEKFTDVLLKGE---------YALGTVVPKRALVNLDDK 215          
BLAST of CX675506 vs. ExPASy Swiss-Prot
Match: DTDA_METKA (D-tyrosyl-tRNA(Tyr) deacylase OS=Methanopyrus kandleri GN=dtdA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.009e-12
Identity = 52/172 (30.23%), Postives = 81/172 (47.09%), Query Frame = 1
Query:  229 VIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQ---GGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKD-DVWVAHLLSGYSL 729
            ++F S+H + + +P+LTVH   VP    G P P+   GG+P      +P  G    LL+          ++++  E THHGP     P  F+EIGS EE W  ++A +  A  I   +             +    K ++G GGGHYAP H D  L +  +   H++  Y++
Sbjct:   74 IVFASRHESRTKKPSLTVH---VP----GNPTPEAKFGGKPLEVCTADPA-GMKAALLELKRFRDKRGLDYDVCYEVTHHGPRDPGAPCFFIEIGSDEERWTDEEAGEACARAILAAV-------------DPPDVKAVVGYGGGHYAPAHTDAALSNRKLAYGHIVPDYAV 224          
The following BLAST results are available for this feature:
BLAST of CX675506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
DTDA_METMJ8.279e-1330.83D-tyrosyl-tRNA(Tyr) deacylase OS=Methanoculleus ma... [more]
DTDA_SULAC1.412e-1230.20D-tyrosyl-tRNA(Tyr) deacylase OS=Sulfolobus acidoc... [more]
DTDA_METB61.412e-1236.69D-tyrosyl-tRNA(Tyr) deacylase OS=Methanoregula boo... [more]
DTDA_PICTO1.844e-1225.10D-tyrosyl-tRNA(Tyr) deacylase OS=Picrophilus torri... [more]
DTDA_CENSY4.109e-1227.94D-tyrosyl-tRNA(Tyr) deacylase OS=Cenarchaeum symbi... [more]
DTDA_METKA7.009e-1230.23D-tyrosyl-tRNA(Tyr) deacylase OS=Methanopyrus kand... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62F11_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62F11-L22-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675506 ID=CX675506; Name=CX675506; organism=Citrus sinensis; type=EST; length=780bp
CGCGAAATGGTGATCCTAATAGTAGCCACAACGATCGATCCGGCCTCCAT
TAACCCGGCCAACGCCCTTTTGGCCATGCCCGGCTGGAAACCCGGTCCCT
TCTTCCAGGACGATATGAAGAGCTTCGTGAATCAAGAAGTGAGAGTGTTA
CAACACAACAAAAGCATCATAGAAGAGGACGATCTAGACAAGCGTTGGCA
GGAGGCTACCGGCGAAGTCGTTGGCGAAGTTATATTTTTGAGCAAACACA
CTGCCGTTTCGAATCGCCCCGCGCTTACAGTTCATCCAATCGGAGTGCCT
CATTTGCGTGAAGGAGAGCCGCTGCCACAAGGTGGGAGGCCAGGCTGGGC
CGCGCCGCCTAATCCTAGGATAGGCCCGTGGCTCAGACTTTTAAAGAAAA
TTGCTCTCTCTCATAATTTAGTTCCTGAATTTGAGATTACATTAGAGGGT
ACTCACCATGGACCTGTGACTAGTAAGCCAACTATGTTCCTAGAGATTGG
TAGTACAGAAGAATACTGGAAGAGACAGGACGCTGCTCAAGTCATTGCTC
TATTAATTTGGGATGAACTTGGACTTGGAGGAGGCGATGCTGTAGGAAAC
TGGAATAGGGAGAGTGACAAGAACAAGGTTCTTCTTGGAATCGGAGGAGG
ACATTATGCACCTCGGCATATGGACATAGTTCTGAAAGATGATGTTTGGG
TAGCTCACCTACTTTCTGGATATTCCTTGCCTATGGAAGATCCAAGCCAG
TCAAAAGTGGATTCAGAATCGAAAGAAATT
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