CN187738

Overview
NameCN187738
Unique NameCN187738
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN187738_ssr55 microsatellite CN187738_ssr55:55..66. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1814 contig Csv1_Contig1814:17..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN187738 vs. ExPASy Swiss-Prot
Match: KAD_STRPM (Adenylate kinase OS=Streptococcus pyogenes serotype M28 GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22
Identity = 67/213 (31.46%), Postives = 105/213 (49.30%), Query Frame = 3 
Query:  207 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAVFTPK 737
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+++R  V +    P++++Y   G V  I+  + + +VF D  KA+   K
Sbjct:    6 IGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKALLELK 212
[Close]
BLAST of CN187738 vs. ExPASy Swiss-Prot
Match: KAD_STRPF (Adenylate kinase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22
Identity = 67/213 (31.46%), Postives = 105/213 (49.30%), Query Frame = 3 
Query:  207 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAVFTPK 737
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+++R  V +    P++++Y   G V  I+  + + +VF D  KA+   K
Sbjct:    6 MGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKALLELK 212
[Close]
BLAST of CN187738 vs. ExPASy Swiss-Prot
Match: KAD_STRPD (Adenylate kinase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22
Identity = 67/213 (31.46%), Postives = 105/213 (49.30%), Query Frame = 3 
Query:  207 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAVFTPK 737
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+++R  V +    P++++Y   G V  I+  + + +VF D  KA+   K
Sbjct:    6 IGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKALLELK 212
[Close]
BLAST of CN187738 vs. ExPASy Swiss-Prot
Match: KAD_STRPC (Adenylate kinase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22
Identity = 67/213 (31.46%), Postives = 105/213 (49.30%), Query Frame = 3 
Query:  207 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAVFTPK 737
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+++R  V +    P++++Y   G V  I+  + + +VF D  KA+   K
Sbjct:    6 IGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKALLELK 212
[Close]
BLAST of CN187738 vs. ExPASy Swiss-Prot
Match: KAD_STRPB (Adenylate kinase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22
Identity = 67/213 (31.46%), Postives = 105/213 (49.30%), Query Frame = 3 
Query:  207 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAVFTPK 737
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+++R  V +    P++++Y   G V  I+  + + +VF D  KA+   K
Sbjct:    6 IGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKALLELK 212
[Close]
BLAST of CN187738 vs. ExPASy Swiss-Prot
Match: KAD_STRP8 (Adenylate kinase OS=Streptococcus pyogenes serotype M18 GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22
Identity = 67/213 (31.46%), Postives = 105/213 (49.30%), Query Frame = 3 
Query:  207 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAVFTPK 737
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+++R  V +    P++++Y   G V  I+  + + +VF D  KA+   K
Sbjct:    6 IGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKALLELK 212
[Close]
BLAST of CN187738 vs. ExPASy Swiss-Prot
Match: KAD_STRP3 (Adenylate kinase OS=Streptococcus pyogenes serotype M3 GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22
Identity = 67/213 (31.46%), Postives = 105/213 (49.30%), Query Frame = 3 
Query:  207 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAVFTPK 737
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+++R  V +    P++++Y   G V  I+  + + +VF D  KA+   K
Sbjct:    6 MGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKALLELK 212
[Close]
BLAST of CN187738 vs. ExPASy Swiss-Prot
Match: KAD_STRP1 (Adenylate kinase OS=Streptococcus pyogenes serotype M1 GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22
Identity = 67/213 (31.46%), Postives = 105/213 (49.30%), Query Frame = 3 
Query:  207 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAVFTPK 737
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+++R  V +    P++++Y   G V  I+  + + +VF D  KA+   K
Sbjct:    6 MGLPGAGKGTQAAKIVEEFGIAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLVERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKALLELK 212
[Close]
BLAST of CN187738 vs. ExPASy Swiss-Prot
Match: KAD_SHIF8 (Adenylate kinase OS=Shigella flexneri serotype 5b (strain 8401) GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22
Identity = 68/201 (33.83%), Postives = 101/201 (50.25%), Query Frame = 3 
Query:  207 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 704
            LG PG+GKGTQ   I+E +G   +S GD+LRA +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205
[Close]
BLAST of CN187738 vs. ExPASy Swiss-Prot
Match: KAD_SHIBS (Adenylate kinase OS=Shigella boydii serotype 4 (strain Sb227) GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22
Identity = 68/201 (33.83%), Postives = 101/201 (50.25%), Query Frame = 3 
Query:  207 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 704
            LG PG+GKGTQ   I+E +G   +S GD+LRA +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205
The following BLAST results are available for this feature:
BLAST of CN187738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_STRPM3.400e-2231.46Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRPF3.400e-2231.46Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRPD3.400e-2231.46Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRPC3.400e-2231.46Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRPB3.400e-2231.46Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRP83.400e-2231.46Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRP33.400e-2231.46Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRP13.400e-2231.46Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_SHIF83.400e-2233.83Adenylate kinase OS=Shigella flexneri serotype 5b ... [more]
KAD_SHIBS3.400e-2233.83Adenylate kinase OS=Shigella boydii serotype 4 (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004O22_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187738 ID=CN187738; Name=CN187738; organism=Citrus sinensis; type=EST; length=789bp
AGTGAACATTGGCAATTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATA
TTCTTCTCTCTCTCTCCAAACAAAACAACGCTCGCAATTCGCTAAGATCG
GTTATTCAGACTGAGTTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTC
CTGTCAAGGAAGCAGATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTT
TTTGTTTTGGGTGGACCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACAT
TGTTGAACACTTTGGATACACCCATCTCAGTGCTGGTGATCTTCTCAGAG
CCGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATT
AAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAA
AGCAATGGAGGAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCA
GAAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCA
GAATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCAT
TTTGAATAGGAATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGA
AGCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTAT
GAAGCTAAGGGTAAAGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGA
GGTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGCTG
CTGCTTAGGTCTTCTCTGTCCAGAGTATCAGATTTAATA
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