CK938493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: SGTA_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus GN=Sgta PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 3.072e-16 Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 3 Query: 99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNE 407 A+ K +GN ++EAAV + +AI L+P N V + NR+AA++ L NY A+ D ++ + + P +SK Y R+G A L + EAV YKK L++DP+N+ Sbjct: 92 AERLKTEGNEQMKLENFEAAVHLYGKAIELNPANAVYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDND 194
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: TTC12_MACFA (Tetratricopeptide repeat protein 12 (Fragment) OS=Macaca fascicularis GN=TTC12 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.883e-15 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 3 Query: 96 MADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDP 398 +AD K KGN AF+ G+YE A+ H++E + D VLY+NR+ A+ L NY AL D + ++ +K Y +G A+L L++Y + YKK L+I+P Sbjct: 105 LADALKDKGNEAFAEGNYETAILHYSEGLEKLKDVKVLYTNRAQAYMKLKNYEKALVDCEWALKCDEKCTKAYFHMGRANLALKNYSVSRECYKKILEINP 205
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: PPP5_SOLLC (Serine/threonine-protein phosphatase 5 OS=Solanum lycopersicum GN=PP5 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.202e-14 Identity = 38/105 (36.19%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 90 ADMADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNN 404 A A+E K N AF Y A+ +T+AI L+ +N V Y+NR+ AH L Y A+ D + +E+ P +SKGY R GAA+L + + +A+ +++ + PN+ Sbjct: 11 ASRAEELKQLANEAFKGHKYSQAIDLYTQAIELNGENAVYYANRAFAHTKLEEYGSAIQDGTRAIEIDPRYSKGYYRRGAAYLAMGKFKDALKDFQQVKKLCPND 115
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: SGT_DICDI (Small glutamine-rich tetratricopeptide repeat-containing protein OS=Dictyostelium discoideum GN=sgt PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.875e-14 Identity = 45/189 (23.81%), Postives = 90/189 (47.62%), Query Frame = 3 Query: 96 MADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNP---------FGSAFAGPEMWA---KLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLY 626 +A++ K +GNA + G ++ A+ + +AI N + ++NR+A +++L N+ ++ D + ++ P++ K Y+R+G+A+ L + EA+ +Y K ++++PNNE P FGS + P + L +DP + +D D M + NP+ L ++ Sbjct: 144 IAEKLKNEGNAKLNEGKHQEALSCYNKAILYDNTNAIYFANRAATYSALQNFEKSIEDCLEAIKRNPNYGKAYTRMGSAYTSLGKFSEAMEAYNKAIELEPNNETFKASLANAERLAAAANNQAPAMPNIPGMPDLGGLDFGSLLSNPAIRGLANNLMSDPKMKEMMDNGD----MASLLNNPDLLKMF 328
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: PPP5_ARATH (Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana GN=PAPP5 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14 Identity = 37/102 (36.27%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNN 404 A+E K++ N AF Y +A+ +T+AI L+ +N V ++NR+ AH L Y A+ DA K +E+ +SKGY R GAA+L + + +A+ +++ + PN+ Sbjct: 13 AEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEYGSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDALKDFQQVKRLSPND 114
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: TTC12_HUMAN (Tetratricopeptide repeat protein 12 OS=Homo sapiens GN=TTC12 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.427e-13 Identity = 38/101 (37.62%), Postives = 60/101 (59.41%), Query Frame = 3 Query: 96 MADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDP 398 +AD K KGN AF+ G+YE A+ ++E + D VLY+NR+ A+ L +Y AL D + ++ +K Y +G A+L L++Y + YKK L+I+P Sbjct: 105 LADALKEKGNEAFAEGNYETAILRYSEGLEKLKDMKVLYTNRAQAYMKLEDYEKALVDCEWALKCDEKCTKAYFHMGKANLALKNYSVSRECYKKILEINP 205
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: PPP5_RAT (Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus GN=Ppp5c PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.179e-13 Identity = 36/103 (34.95%), Postives = 60/103 (58.25%), Query Frame = 3 Query: 99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNE 407 A+E K + N F + DYE A++ +++AI L+P N + Y NRS A+ Y AL DA + +EL + KGY R A+++ L + A+ Y+ + + PN++ Sbjct: 28 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPNDK 130
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: PPP5_MOUSE (Serine/threonine-protein phosphatase 5 OS=Mus musculus GN=Ppp5c PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.152e-13 Identity = 36/103 (34.95%), Postives = 60/103 (58.25%), Query Frame = 3 Query: 99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNE 407 A+E K + N F + DYE A++ +++AI L+P N + Y NRS A+ Y AL DA + +EL + KGY R A+++ L + A+ Y+ + + PN++ Sbjct: 28 AEELKTQANDYFKAKDYENAIKFYSQAIELNPGNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPNDK 130
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: TTC12_MOUSE (Tetratricopeptide repeat protein 12 OS=Mus musculus GN=Ttc12 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.082e-13 Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 3 Query: 96 MADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDP 398 +AD K KGN AF GDYE A+ ++E + D VLY+NR+ A L +Y AL D ++ + +K Y +G AH+ L++Y +A Y+K +I+P Sbjct: 104 LADALKEKGNEAFVRGDYETAIFFYSEGLGKLKDMKVLYTNRAQAFIKLGDYQKALVDCDWALKCDENCTKAYFHMGKAHVALKNYSKAKECYQKIEEINP 204
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: RPAP3_XENTR (RNA polymerase II-associated protein 3 OS=Xenopus tropicalis GN=rpap3 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.208e-12 Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 3 Query: 111 KAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNN 404 K KGN F SG Y+ A+ +T + P N VL +NR++A L YA A +D + L +++K Y+R GAA L L+D A Y+K L++D NN Sbjct: 136 KEKGNNYFKSGQYDEAIECYTRGMDADPYNAVLPTNRASAFFRLKKYAVAESDCNLAIALNHNYAKAYARRGAARLALKDLQGAKEDYEKVLELDVNN 233 The following BLAST results are available for this feature:
BLAST of CK938493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938493 ID=CK938493; Name=CK938493; organism=Citrus sinensis; type=EST; length=835bpback to top |