CK938490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPEA_PROM3 (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9303) GN=speA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.057e-13 Identity = 38/106 (35.85%), Postives = 60/106 (56.60%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAE 322 TCDS K+D+FIG + L E+ + Y +GMFL GAY+E +G +HNLFG + V + + G + + + G + +VL M+H PE++ E L+ +E Sbjct: 514 TCDSDGKLDRFIGNGQTKTLLEL--HNLRQNEAYMIGMFLAGAYQEVMGNLHNLFGSTNAVHIRMTTGGG-YQIDHVVRGNTNSEVLEAMEHNPEILLERLRLASE 616
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPEA_PROMM (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9313) GN=speA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.762e-12 Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV-LQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAE 322 TCDS K+D+FIG + L E+ + Y +GMFL GAY+E +G +HNLFG + V + L + G + V + G + +VL M+H PEL+ E L+ +E Sbjct: 514 TCDSDGKLDRFIGNGQTKTLLEL--HNLRQNEAYMIGMFLAGAYQEVMGNLHNLFGSTNAVHIRLTTAGG--YQVDHVVRGNTNSEVLEAMEHNPELLLERLRLASE 616
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPE1_AVESA (Arginine decarboxylase OS=Avena sativa GN=SPE1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.762e-12 Identity = 40/108 (37.04%), Postives = 63/108 (58.33%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHE-PELMFETLKHRAEE 325 TCDS K+DKFI ++PLH + + G YY+ + L GAY+EAL HNLFGGPS+VRV+ + F V A+ G + +++ + ++ + + ++ RA E Sbjct: 474 TCDSDGKVDKFIRDTETMPLHPLDP----KLGGYYVAVLLTGAYQEALSNKHNLFGGPSLVRVVGTGNGGAFNVEAALLGSTTEELIGTVSYDVKQDISSVIEERARE 577
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPEA_GLOVI (Biosynthetic arginine decarboxylase OS=Gloeobacter violaceus GN=speA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.696e-12 Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 2 Query: 5 TCDSAFKIDKFIG---GXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV-LQSD--GPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAEE 325 TCDS KID+FI L LH + PYYLGMFL GAY+E LG +HNLFG + V + L SD G + + + G + +VL +Q++ E M E+++ E+ Sbjct: 497 TCDSDGKIDQFIDLRDVKGVLELHPV-----RPEEPYYLGMFLNGAYQEILGDMHNLFGDTNTVHIHLASDEPGEQSYRLEHVVKGDTMTEVLKYVQYDHEAMLESIRRETEQ 604
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPEA1_SYNY3 (Biosynthetic arginine decarboxylase 1 OS=Synechocystis sp. (strain PCC 6803) GN=speA1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.696e-12 Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = 2 Query: 5 TCDSAFKIDKFIG---GXXSLPLHEMVG----GGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAEE 325 TCDS KID+FI L LH ++ G PYYLGMFL GAY+E +G +HNLFG +VV + + P + + + G + +VL +Q++PE + E ++ E+ Sbjct: 546 TCDSDGKIDQFIDLRDVKSVLELHPLIEVHQPGTPPRVEPYYLGMFLVGAYQEIMGNLHNLFGDINVVHIQMN--PKGYQIEHLVRGDTIAEVLGYVQYDPEDLLENMRRYCEQ 657
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPEA_ANASP (Biosynthetic arginine decarboxylase OS=Anabaena sp. (strain PCC 7120) GN=speA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.746e-12 Identity = 39/106 (36.79%), Postives = 60/106 (56.60%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAE 322 TCDS KID+FI + E+ GE PYY+GMFL GAY+E +G +HNLFG + V + + P + + + G + +V+ +Q++ E M E ++ R E Sbjct: 546 TCDSDGKIDRFIDLRDVKSVLELHPFQPGE--PYYMGMFLNGAYQEIMGNLHNLFGDTNAVHIQLT--PKGYQIEHVVKGDTMSEVVSYVQYDSEDMVENIRQRCE 647
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPEA2_SYNY3 (Biosynthetic arginine decarboxylase 2 OS=Synechocystis sp. (strain PCC 6803) GN=speA2 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.323e-11 Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 2 Query: 5 TCDSAFKIDKFIG---GXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAE 322 TCDS KID+FI L +H + G PYYLGMFL GAY+E +G +HNLFG +VV + + P + + + G + +VL +Q++ + + E L+ E Sbjct: 526 TCDSDGKIDRFIDLWDVKSYLEVHPLENDG----NPYYLGMFLVGAYQEIMGNLHNLFGDINVVHIATT--PQGYQIESVVRGDTMTEVLGYVQYDSDDLLEGLRRHTE 628
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPEA_THEEB (Biosynthetic arginine decarboxylase OS=Thermosynechococcus elongatus (strain BP-1) GN=speA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.340e-11 Identity = 39/112 (34.82%), Postives = 62/112 (55.36%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAEEYCGQE 340 TCDS KID+FI + E+ GE PYYLG+FL GAY+E +G +HNLFG + V + + P + + + G + +VL +Q++ + + E ++ R E +E Sbjct: 504 TCDSDGKIDQFIDLRDVKSVLELHPFRPGE--PYYLGLFLNGAYQEIMGNLHNLFGDTNAVHIRLT--PKGYEIEHLVRGDTMQEVLGYVQYQGDALLEKIRCRTEAALAEE 611
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPEA_RHOBA (Biosynthetic arginine decarboxylase OS=Rhodopirellula baltica GN=speA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.340e-11 Identity = 42/116 (36.21%), Postives = 58/116 (50.00%), Query Frame = 2 Query: 5 TCDSAFKIDKFI---GGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAEEYCGQEH 343 TCDS K+D F+ G +L LH + G PY L +F+ GAY+E LG +HNLFG V V DG + V + G + +VL +Q+E + E L+ E G H Sbjct: 532 TCDSDGKVDAFVCGGGRQRTLMLHPLKSGE-----PYQLAVFMVGAYQEILGDLHNLFGDTHAVHVDIEDG--VTKVRSIVKGDTVSEVLGYVQYEDRELIENLQESVESAIGNGH 640
BLAST of CK938490 vs. ExPASy Swiss-Prot
Match: SPEA_PROMA (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus GN=speA PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.404e-11 Identity = 38/107 (35.51%), Postives = 59/107 (55.14%), Query Frame = 2 Query: 5 TCDSAFKIDKFIGGXXSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV-LQSDGPHIFAVTRAMPGPSCGDVLWVMQHEPELMFETLKHRAE 322 TCDS K+ +FI L E+ E Y++GMFLGGAY+E +G +HNLFG + + + L +G + + + G S DVL M+H+ E + E ++ +E Sbjct: 514 TCDSDGKLARFINNGQEKFLLELHTVKANEN--YWIGMFLGGAYQEVMGNLHNLFGSTNAIHIRLTKNGK--YKLDHVVRGNSKSDVLQAMEHDSEQLLERIRMASE 616 The following BLAST results are available for this feature:
BLAST of CK938490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938490 ID=CK938490; Name=CK938490; organism=Citrus sinensis; type=EST; length=344bpback to top |